KEGG   Verticillium dahliae: VDAG_04200
Entry
VDAG_04200        CDS       T03450                                 
Name
(RefSeq) splicing factor U2AF 23 kDa subunit
  KO
K12836  splicing factor U2AF 35 kDa subunit
Organism
vda  Verticillium dahliae
Pathway
vda03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:vda00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    VDAG_04200
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:vda03041]
    VDAG_04200
Spliceosome [BR:vda03041]
 Complex A
  U2 snRNP components
   U2 related factors
    VDAG_04200
 Complex B
    VDAG_04200
SSDB
Motif
Pfam: zf-CCCH RRM_1 Torus zf-CCCH_3 SCRG1 zf_CCCH_4
Other DBs
NCBI-GeneID: 20705663
NCBI-ProteinID: XP_009648942
UniProt: G2X306
LinkDB
Position
1
AA seq 210 aa
MANFLASIFGTELDKVNCSFYFKIGACRHGDRCSRKHVKPSYSQTILMPNLYQNPAYDPK
NRMNPSQLQNHFDAFYEDIWCELCQYGELEELVVCDNNNDHLIGNVYARFKYEDSAQKAC
DALNSRWYAARPIYAELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKNPSDELDRELVL
STKKWLKDRGRDERSPSRSPTPEPTRRRFA
NT seq 633 nt   +upstreamnt  +downstreamnt
atggccaacttcctcgcctccattttcggcaccgagctcgacaaggtcaactgctccttc
tacttcaagatcggcgcctgccgccacggcgaccgctgctcgcgaaagcacgtcaagccc
tcgtatagccagacgattctcatgccgaacctgtaccagaacccggcctacgacccgaag
aaccgcatgaacccgagccagctgcagaaccactttgacgccttttacgaggacatttgg
tgcgagctatgccagtacggagagctcgaagagctcgtcgtctgcgacaacaataacgac
cacctcatcggcaacgtctacgcccgcttcaagtacgaagactcggcgcaaaaagcctgc
gacgcgctcaactcgcgctggtacgccgcgcggcccatctacgccgagctgtcgcccgtg
accgactttcgcgaggcctgctgtcgcctcaactcgggcgagggctgcgtgcgcggcggc
ttctgcaactttatccaccgcaagaacccctcggacgagctcgaccgcgagctcgtcctc
agcaccaagaagtggctcaaggaccgcggccgcgacgagaggagcccctcgcgcagcccg
acgcctgagccgacgaggcggcggttcgcttga

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