Verticillium dahliae: VDAG_04264 Help Entry VDAG_04264        CDS       T03450                                  Name (RefSeq) U2 snRNP component prp10   KO K12828   splicing factor 3B subunit 1 Organism vda  Verticillium dahliae Pathway vda03040   Spliceosome Brite KEGG Orthology (KO) [BR:vda00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     VDAG_04264  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03041 Spliceosome [BR:vda03041]     VDAG_04264    03036 Chromosome and associated proteins [BR:vda03036]     VDAG_04264 Spliceosome [BR:vda03041]  Complex A   U2 snRNP components    U2 snRNP specific factors     VDAG_04264  Complex B     VDAG_04264  Complex C    U2 SnRNP specific factors     VDAG_04264 Chromosome and associated proteins [BR:vda03036]  Eukaryotic type   Chromatin remodeling factors    B-WICH complex     VDAG_04264 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  SF3b1 PPP2R1A-like_HEAT HEAT_EZ TOR1L1_N HEAT_EF3_N HEAT_2 Htt_N-HEAT_1 UTP20 XMAP215_CLASP_TOG Adaptin_N mTOR_dom UNC45-central Motif Other DBs NCBI-GeneID:  20705727 NCBI-ProteinID:  XP_009649006 UniProt:  G2X1U0 LinkDB All DBs Position 1 AA seq 1223 aa AA seqDB search MSDSDFETIRQLQAERNAAAAAKKGSNAFDPSNQRPDTVSTKQKLTDTVDTDLYDANGAD KFAGYATSIPTGINGDDDDDDMNGVDNTRRLVGQYTASRDMLDEFSRGDGVEEEDVLAGR GEKSNRITDRETDYQKRRFDRVLTPTRADPFAANRQAGAAEGGSTYRDVMEAKELEREEE RVRRAILDKAEGRVEDGNTAPATLTNGDDKENGDSGSTELAAAGRKRKKRWDVSSTPTDD AAAAQPDGAVKKRSRWDQTPAPGAEVVKKSSRWDQAPSATPMGNQGLATPMHPSQAGGAI LPTTFGPDMSGRNMPLSDEELNELLPGEEQGYKILEPPPGYAPLRAPTHRLVATPAPQSG FTMQDPDAVRLSGKPVPGEIPGIGDLQFFKAEDMAYFGKLTDGADENDLSVEQMKERKIM RLLLKVKNGTPPMRKTALRQLTDNARQFGAGPLFDQILPLLMEKTLEDQERHLLVKVIDR ILYKLDDLVRPYVHKILVVIEPLLIDQDYYARVEGREIISNLSKAAGLATMISTMRHDID HTDEYVRNTTARAFAVVASALGIPALLPFLRAVCRSKKQWQARHTGVKIVQQIPILMGCA VLPHLKGLVDCIAPNLNDEQTKVRTVTSLAIAALAEASNPYGIESFDDILNPLWTGARKQ RGKGLAGFLKAVGFIIPLMDEEYANYYTSQIMEILLREFSSPDEEMKKVVLKVVSQCAGT DGVTAGYLKEHVLDDFFKSFWVRRMALDKRNYRQVVETTVDIGQKVGVSEIIERIVVNLK DESEAYRKMTVETIEKIVASLGAADIGERLEERLIDGILHAFQEQSVEDIIMLNGFGSVV NALGSRCKPYLPQIVSTILWRLNNKSATVRQQAADLISRIAMVMKQCGEDALMGKLGVVL YEYLGEEYPEVLGSILGALRSIVTVVGITQMQPPIKDLLPRLTPILRNRHEKVQENTIDL VGRIADRGPESVNAREWMRICFELLDMLKAHKKGIRRAANNTFGFIAKAIGPQDVLATLL NNLRVQERQSRVNTAVAIGIVAETCAPFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYI GEMAKDYVYAVTPLLEDALIDRDQVHRQTAASVVKHIALGVVGLGCEDAMIHLLNLLYPN LFETSPHVIDRIVEAIEAVRMAVGPGVVMNYVWAGLFHPARKVRQPYWRLYNDAYVQGAD AMVPYYPNLDEDKMDRPELAIML NT seq 3672 nt NT seq  +upstreamnt  +downstreamnt atgtctgactcggacttcgagacgatccgccagctccaggccgagcgcaacgctgccgct gccgccaaaaaaggctctaacgccttcgacccttctaaccagcgccccgacacggtcagc accaagcagaagcttaccgacaccgttgacaccgatctctatgatgccaacggcgccgat aagtttgctggctatgccacctctattcctaccggcatcaacggcgacgatgacgacgac gacatgaacggcgtcgacaatacgcgccgcctcgtcggccagtatactgcctctcgcgac atgctcgacgagttctctcgcggcgatggcgtcgaggaggaagacgtgcttgctggccgc ggcgagaagagcaaccggatcaccgatcgcgagaccgactatcagaagcgccgcttcgac cgcgtcctcacccccacccgcgcggacccttttgccgcaaaccgtcaagctggcgccgcc gagggtggctcgacctaccgcgatgtcatggaggcaaaggagctcgagcgcgaggaggag cgcgttcgccgcgccatcctggacaaggccgagggcagggtcgaagatggcaacacggct ccggcaaccctgaccaacggtgacgacaaggagaatggagactctggatcgactgagctc gctgctgccgggcgcaagaggaagaagagatgggatgtttcatccactcccacagacgac gcggctgccgcccagcctgatggtgccgtcaagaagcgatcccggtgggatcagacgccc gcccctggcgctgaggttgtcaagaagtcgtctcgctgggaccaggctccttctgccacc ccgatgggcaaccaaggactggctacgcccatgcacccttcgcaagccggcggtgccatc ttgccgaccacctttggccccgacatgtctggccgtaacatgccgctcagcgacgaggag cttaacgagctccttcccggagaggagcagggctacaagatcctcgagccccctcccggc tacgctccgcttcgcgccccaacccacaggcttgtggcaacgcctgctccgcagagcggc ttcaccatgcaggatcctgatgcggtcaggcttagcggcaagcctgtaccgggagaaatt cccggcattggcgaccttcagttcttcaaggccgaagatatggcctatttcggcaagctt accgacggcgccgacgagaacgatctcagtgtggagcagatgaaggagaggaagatcatg aggctgctcctcaaagtcaagaatggtacaccaccaatgcgcaagactgctttgcgacag ctcacagacaatgctaggcagtttggagctggtccactcttcgaccagattctgcccctc ctcatggaaaagactctggaagaccaggaacgccacctgctcgtcaaggtcatcgatcgt atattgtacaagctcgatgaccttgttcggccctatgtgcacaagattctcgtcgtcatt gagccgctgctcatcgaccaagactactatgccagagtggagggtcgtgagatcatctcc aacctcagtaaagccgctggtctcgccaccatgatcagtaccatgaggcacgacatcgat cataccgatgagtacgtcagaaacaccaccgcccgagccttcgccgtcgtggcctcggcg ctcggcattccagctcttcttcctttcctgagagccgtctgccgaagcaagaagcaatgg caggcgcgacacacgggtgtcaagattgtgcagcagattcccattcttatggggtgcgcc gttcttcctcatctgaaaggccttgtggactgcatcgcccccaacctgaatgatgagcag accaaggtccgcaccgtcaccagtctggccatcgccgccctcgccgaggcatcgaacccc tacggtatcgaaagtttcgatgacatcctcaaccccctctggacaggcgcgcgaaagcaa cgaggcaagggtcttgctggcttcttgaaggctgttggcttcatcattcccctcatggac gaggaatacgccaactactacacgagccagatcatggagattctccttcgagagttctcc tcaccagacgaagagatgaagaaggtagtgctcaaggtggtgtcccagtgtgcaggtacc gatggtgtcaccgcgggctatctcaaagaacacgtcctcgacgattttttcaagagcttc tgggtcagaaggatggccctcgacaagcgcaactacagacaagtggttgagaccacggtc gacattggccaaaaggtcggtgtcagcgagatcattgagagaatcgttgtcaacctgaag gatgagagcgaagcataccgcaagatgacggtagagacgattgagaagatcgttgcgagt ctgggtgctgccgatattggcgagagactcgaagagcgactcatcgacggcattctgcac gcattccaggagcagagcgtcgaggacatcatcatgctcaatggctttggctccgtcgtc aatgcactgggctcccggtgcaagccatacctcccacaaatcgtcagcaccattctctgg agactgaacaacaagtcagccactgtacgacagcaggcagctgatcttatctcgcgcatt gctatggtcatgaagcaatgcggcgaagacgcgctcatgggtaaacttggtgtcgtgctc tacgagtacctgggcgaggagtacccggaggttcttggttccattctaggcgcccttcga tccatcgttaccgtcgttggtatcacacagatgcaaccgcccatcaaagacctactcccc cgtctcacccccattcttcgcaatcgacacgagaaggtccaagagaacaccatcgatctc gttggtcgtatcgctgatcgtggccctgaaagcgtcaatgcacgagaatggatgcgaatc tgtttcgagctccttgacatgctgaaagcccacaaaaagggtattcgtcgtgcggccaac aacactttcggtttcatcgccaaggccatcggcccccaggatgttttggctactctgctc aacaacctgagggtgcaagagcgccagtctcgtgtcaacacggctgtcgctattggtatc gtggccgaaacctgcgcgcctttcaccgtcctgcccgctctcatgaacgagtaccgtgtt cccgaactcaatgttcaaaacggtgtactcaagtcactctccttccttttcgagtacatt ggcgagatggccaaggactacgtttacgctgtcacaccactgctcgaagacgcgctcatc gatcgcgaccaggtccaccgacaaacagctgcgtccgttgtcaagcacattgcgctcggc gtggttggcctcggctgtgaggacgctatgatccatcttcttaaccttctctacccgaac ttgttcgagacgagtccacacgtcattgatcgcatcgtcgaggctatcgaggctgtccgc atggctgtcggacctggtgtcgtgatgaactatgtctgggcgggtctcttccacccggca cgcaaggtacgccagccctattggcggctgtacaacgatgcgtacgtccagggcgcggat gccatggtaccatactatcccaacctcgacgaagacaagatggacaggccagagttggct atcatgctttga

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