KEGG   Verticillium dahliae: VDAG_04271
Entry
VDAG_04271        CDS       T03450                                 
Name
(RefSeq) 26S protease subunit RPT4
  KO
K03064  26S proteasome regulatory subunit T4
Organism
vda  Verticillium dahliae
Pathway
vda03050  Proteasome
Brite
KEGG Orthology (KO) [BR:vda00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03050 Proteasome
    VDAG_04271
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03051 Proteasome [BR:vda03051]
    VDAG_04271
Proteasome [BR:vda03051]
 Eukaryotic proteasome
  Regulatory particles
   PA700 (19S proteasome)
    ATPase subunits
     VDAG_04271
SSDB
Motif
Pfam: AAA Prot_ATP_ID_OB_C AAA_lid_3 AAA_16 AAA_5 PRS7_OB RuvB_N AAA_2 AAA_22 TIP49 nSTAND3 AAA_14 DUF815 AAA_lid_PRS2_C AAA_7 AAA_11 Sigma54_activat NPHP3_N Prot_ATP_ID_OB_N DUF4200 RNA_helicase TsaE Mg_chelatase Parvo_NS1 Tektin AAA_3 AAA_18 AAA_28 AAA_33 AAA_24 AAA_25 IstB_IS21 bpMoxR ATPase_2 NACHT eIF-1a Sigma54_activ_2 ATPase AAA_30 PhoH Trimer_CC AAA_19 ResIII T2SSE Spc29
Other DBs
NCBI-GeneID: 20705734
NCBI-ProteinID: XP_009649013
UniProt: G2X1U7
LinkDB
Position
1
AA seq 373 aa
MSSEEERQQALDAYRSELLKSRELETKLKDLRLEIRELQKEFDRTEDSIKALQSVGQIIG
EVLKQLPDERFIVKASSGPRYVVGCRTKLDKEKLKQGTRVALDMTTLTIMRMLPREVDPL
VYNMSLEDPGQVNFAGIGGLNDQIRELRDPRKGVLLYGPPGTGKTLLARAVASSLETNFL
KIVSSAIVDKYIGESARLIREMFGYAKEHEPCIIFMDEIDAIGGRRFSEGTSADREIQRT
LMELLNQLDGFDYLGKTKIIMATNRPDTLDPALLRAGRLDRKIEIPLPNEVGRLEILKIH
AAGVITDGEIDFESVVKMSDGLNGADLRNVVTEAGLFAIKDYRDAISQDDFNKAVRKVAE
SKKLEGKLEYQKL
NT seq 1122 nt   +upstreamnt  +downstreamnt
atgtcgtccgaggaggaacgccagcaggccctcgatgcctaccgatccgagctcctcaag
tcgagggagctcgagacgaagttgaaggacttgcgcctggagattagggaactacagaag
gagtttgaccgcaccgaagactccatcaaggcactgcaaagtgtaggccagattatcggt
gaagtcctcaagcagctaccagatgagcgattcatcgtcaaggcctcctctgggccgcgg
tacgtggtcggctgccgtacgaagctcgacaaggagaagctgaagcaaggaacacgcgtc
gccctcgacatgacaacactcaccatcatgcgcatgctccctcgcgaagtcgaccctctc
gtctataacatgtccctcgaggatcccggccaggtcaactttgccggtattggtggcctg
aacgatcagattcgcgaactccgcgacccccgaaagggtgtcctcctgtacggcccccct
ggtaccggcaagacccttctggcgcgtgctgttgcatctagtctcgagacaaacttcctg
aagatcgtttcctctgccatcgtcgacaagtacatcggagagtcagcccgtttgattcga
gaaatgttcggctacgcaaaggagcacgaaccctgcatcatcttcatggacgaaattgac
gccattggtggtcgaagattctctgagggtaccagtgcggatcgtgaaatccagcggacg
ctcatggagctgctcaaccaactcgacggtttcgattaccttggcaagacgaagatcatc
atggccaccaaccgacccgatacccttgaccccgctcttctccgtgccggccgtctcgat
cgtaagattgagattcctctgcctaacgaggttgggcgcctggagattctcaagatccat
gctgccggtgtcatcaccgatggcgagattgattttgagagcgtagtcaagatgagcgat
ggcctgaacggtgctgatctgcgcaatgttgtcacagaagctggcctcttcgctatcaag
gactaccgtgatgccatcagccaagacgatttcaacaaggccgttcgcaaggtggccgaa
tcgaagaagctcgagggcaagcttgagtaccagaagctctag

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