Verticillium dahliae: VDAG_04652
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Entry
VDAG_04652 CDS
T03450
Name
(RefSeq) branchpoint-bridging protein
KO
K13095
splicing factor 1
Organism
vda
Verticillium dahliae
Pathway
vda03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
vda00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
VDAG_04652
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
vda03041
]
VDAG_04652
Spliceosome [BR:
vda03041
]
Complex A
Other components
Complex A specific factors
VDAG_04652
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SF1-HH
KH-I_KHDC4-BBP
zf-CCHC
KH_1
zf-CCHC_6
zf-CCHC_4
zf-CCHC_3
zf-CCHC_2
CCDC93_CC
KH_NusA_1st
Motif
Other DBs
NCBI-GeneID:
20706115
NCBI-ProteinID:
XP_009652551
UniProt:
G2X3R5
LinkDB
All DBs
Position
3
AA seq
590 aa
AA seq
DB search
MSWRNQGITGSNNIPLGKRRFGDDEEDGGGGGRDRAPAVGGAELKRGRSPEPRTDADGPR
RRKKRNRWGDASENKAAGLMGLPTAIMANMTSEQLEAYTLHLRIEEISQKLRIDDVVPAD
GDRSPSPAPQYDNHGRRINTREYRYRKKLEDERHKLIEKAMKTIPNYHPPQDYRRPTKTQ
EKVYVPVNDYPEINFIGLLIGPRGNTLKKMENESGAKIAIRGKGSVKEGKGRSDAAHSSN
QEEDLHCLIMADTEEKVNKAKKLIHNVIETAASIPEGQNELKRNQLRELAALNGTLRDDE
NQACQNCGQIGHRKYDCPEKQNYTASIICRVCGNAGHMARDCPDRQRGASWRNDGAGPRP
AGRIDGGDAVDREYEYTDRAQQLMQELGGGPADGAPPARIEAGPGSYNNDQRGGDVKPWQ
RGPTGGPAPWRSRNESNHDGGSGGGGGGGGGGGAAPWARDRNRDRDDHRGHGGGGGGGGG
DYYGGQGGNNYGSHGGQNAAPWQQAPGTQGGYGGYGGYSGGYGAPPGMSAPPGIPPPPGA
PGLGAPPNLTGNLNALIQQYAGGAPPPPPPSDNAPPPPPSDQPPPPPPGA
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtggagaaaccagggcatcaccggttcgaacaacatcccactgggaaagcgtcgc
tttggcgatgacgaagaagacggcggcggcggtggtcgcgaccgtgcccctgcagttggt
ggtgccgaactgaagcgcggtcgtagtcctgaacctcgcaccgatgccgatggcccgcga
cgccgcaagaagcgcaaccgatggggcgacgcctccgaaaacaaggccgctggccttatg
ggcctgccgacggccatcatggccaacatgaccagcgaacagctcgaggcgtacaccctg
catcttcgaatcgaagaaattagtcaaaagcttcgcatcgacgatgtcgtccctgccgac
ggcgaccgatcgccctctcctgcaccccagtacgacaaccatggtcgccgtatcaacact
cgcgagtaccgctaccgcaagaagctcgaggatgagcgccacaaactcatcgagaaggcc
atgaagacgatccccaactaccacccgccccaggattaccgcaggccgaccaagacccag
gagaaggtctacgtgcccgtcaacgattacccagagattaacttcattggcttacttatc
ggccctcgtggcaatactttgaagaagatggaaaacgaatctggcgccaagattgccatt
cgtggcaagggctccgtcaaggagggcaagggccgttccgacgccgctcattccagtaac
caggaggaggacctccactgcctcatcatggccgacacggaggagaaggtcaacaaggcc
aaaaagctgattcataatgtcattgagacggctgcttccatccccgaaggccagaatgag
ctcaagcgtaaccagctccgtgagcttgctgctctgaacggcacgctccgtgacgacgag
aaccaggcttgccagaactgtggtcaaatcggacatcgcaagtacgactgccccgagaag
cagaactacaccgccagcatcatctgcagagtctgtggcaacgctggccatatggctagg
gattgtcccgaccgccagcgtggagccagctggcgcaacgacggcgccggcccacgtcct
gccggtcgcatcgacggtggcgatgccgtcgatcgcgagtacgagtatactgaccgagct
cagcaactcatgcaagagcttggcggcggccccgccgatggcgctcctcctgctcgcatc
gaagccggacctggctcgtataacaacgaccagagaggtggtgatgtcaagccctggcag
cgcggcccaacaggcgggcctgctccctggcggtcgcgcaacgagtcgaaccatgacggc
ggctctggcggcggcggcggtggtggtggaggcggcggtgctgctccctgggcgcgtgac
cgtaaccgcgaccgcgatgatcatcgcggccatggtggtggtggcggcggcggcggcggc
gactattacggcggtcaaggtggtaacaactatggcagtcatggtggtcagaacgccgcg
ccgtggcagcaggctcctggtacgcagggcggctacggaggctacggcggttactctggt
ggctatggtgctcctcccggcatgagtgctcctcccggcatcccgccgccacctggagct
cctggtcttggagccccgcctaacctcactggcaaccttaacgcactcatccagcagtac
gcaggcggtgctcctcctcctccgcccccctcggacaacgcacctcctccacctcccagc
gaccagccgcccccgccccctcctggcgcttga
DBGET
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