KEGG   Verticillium dahliae: VDAG_04652
Entry
VDAG_04652        CDS       T03450                                 
Name
(RefSeq) branchpoint-bridging protein
  KO
K13095  splicing factor 1
Organism
vda  Verticillium dahliae
Pathway
vda03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:vda00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    VDAG_04652
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:vda03041]
    VDAG_04652
Spliceosome [BR:vda03041]
 Complex A
  Other components
   Complex A specific factors
    VDAG_04652
SSDB
Motif
Pfam: SF1-HH KH-I_KHDC4-BBP zf-CCHC KH_1 zf-CCHC_6 zf-CCHC_4 zf-CCHC_3 zf-CCHC_2 CCDC93_CC KH_NusA_1st
Other DBs
NCBI-GeneID: 20706115
NCBI-ProteinID: XP_009652551
UniProt: G2X3R5
LinkDB
Position
3
AA seq 590 aa
MSWRNQGITGSNNIPLGKRRFGDDEEDGGGGGRDRAPAVGGAELKRGRSPEPRTDADGPR
RRKKRNRWGDASENKAAGLMGLPTAIMANMTSEQLEAYTLHLRIEEISQKLRIDDVVPAD
GDRSPSPAPQYDNHGRRINTREYRYRKKLEDERHKLIEKAMKTIPNYHPPQDYRRPTKTQ
EKVYVPVNDYPEINFIGLLIGPRGNTLKKMENESGAKIAIRGKGSVKEGKGRSDAAHSSN
QEEDLHCLIMADTEEKVNKAKKLIHNVIETAASIPEGQNELKRNQLRELAALNGTLRDDE
NQACQNCGQIGHRKYDCPEKQNYTASIICRVCGNAGHMARDCPDRQRGASWRNDGAGPRP
AGRIDGGDAVDREYEYTDRAQQLMQELGGGPADGAPPARIEAGPGSYNNDQRGGDVKPWQ
RGPTGGPAPWRSRNESNHDGGSGGGGGGGGGGGAAPWARDRNRDRDDHRGHGGGGGGGGG
DYYGGQGGNNYGSHGGQNAAPWQQAPGTQGGYGGYGGYSGGYGAPPGMSAPPGIPPPPGA
PGLGAPPNLTGNLNALIQQYAGGAPPPPPPSDNAPPPPPSDQPPPPPPGA
NT seq 1773 nt   +upstreamnt  +downstreamnt
atgtcgtggagaaaccagggcatcaccggttcgaacaacatcccactgggaaagcgtcgc
tttggcgatgacgaagaagacggcggcggcggtggtcgcgaccgtgcccctgcagttggt
ggtgccgaactgaagcgcggtcgtagtcctgaacctcgcaccgatgccgatggcccgcga
cgccgcaagaagcgcaaccgatggggcgacgcctccgaaaacaaggccgctggccttatg
ggcctgccgacggccatcatggccaacatgaccagcgaacagctcgaggcgtacaccctg
catcttcgaatcgaagaaattagtcaaaagcttcgcatcgacgatgtcgtccctgccgac
ggcgaccgatcgccctctcctgcaccccagtacgacaaccatggtcgccgtatcaacact
cgcgagtaccgctaccgcaagaagctcgaggatgagcgccacaaactcatcgagaaggcc
atgaagacgatccccaactaccacccgccccaggattaccgcaggccgaccaagacccag
gagaaggtctacgtgcccgtcaacgattacccagagattaacttcattggcttacttatc
ggccctcgtggcaatactttgaagaagatggaaaacgaatctggcgccaagattgccatt
cgtggcaagggctccgtcaaggagggcaagggccgttccgacgccgctcattccagtaac
caggaggaggacctccactgcctcatcatggccgacacggaggagaaggtcaacaaggcc
aaaaagctgattcataatgtcattgagacggctgcttccatccccgaaggccagaatgag
ctcaagcgtaaccagctccgtgagcttgctgctctgaacggcacgctccgtgacgacgag
aaccaggcttgccagaactgtggtcaaatcggacatcgcaagtacgactgccccgagaag
cagaactacaccgccagcatcatctgcagagtctgtggcaacgctggccatatggctagg
gattgtcccgaccgccagcgtggagccagctggcgcaacgacggcgccggcccacgtcct
gccggtcgcatcgacggtggcgatgccgtcgatcgcgagtacgagtatactgaccgagct
cagcaactcatgcaagagcttggcggcggccccgccgatggcgctcctcctgctcgcatc
gaagccggacctggctcgtataacaacgaccagagaggtggtgatgtcaagccctggcag
cgcggcccaacaggcgggcctgctccctggcggtcgcgcaacgagtcgaaccatgacggc
ggctctggcggcggcggcggtggtggtggaggcggcggtgctgctccctgggcgcgtgac
cgtaaccgcgaccgcgatgatcatcgcggccatggtggtggtggcggcggcggcggcggc
gactattacggcggtcaaggtggtaacaactatggcagtcatggtggtcagaacgccgcg
ccgtggcagcaggctcctggtacgcagggcggctacggaggctacggcggttactctggt
ggctatggtgctcctcccggcatgagtgctcctcccggcatcccgccgccacctggagct
cctggtcttggagccccgcctaacctcactggcaaccttaacgcactcatccagcagtac
gcaggcggtgctcctcctcctccgcccccctcggacaacgcacctcctccacctcccagc
gaccagccgcccccgccccctcctggcgcttga

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