Verticillium dahliae: VDAG_04969
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Entry
VDAG_04969 CDS
T03450
Name
(RefSeq) 20S-pre-rRNA D-site endonuclease NOB1
KO
K11883
RNA-binding protein NOB1
Organism
vda
Verticillium dahliae
Pathway
vda03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
vda00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
VDAG_04969
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vda03009
]
VDAG_04969
03051 Proteasome [BR:
vda03051
]
VDAG_04969
Ribosome biogenesis [BR:
vda03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
VDAG_04969
Proteasome [BR:
vda03051
]
Eukaryotic proteasome
Assembling factors
Other assembling factors
VDAG_04969
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Zn_ribbon_NOB1
PIN_6
HypA
DUF2321
Baculo_helicase
WRNPLPNID
Zn_ribbon_NUD
Motif
Other DBs
NCBI-GeneID:
20706432
NCBI-ProteinID:
XP_009653000
UniProt:
G2X487
LinkDB
All DBs
Position
4
AA seq
472 aa
AA seq
DB search
MSVDAQLSAADAQSTVPSEKPTTEQRKPIHSICLDTGPLIKNDPPVSTLIAQADELYTLP
SIIDEIRDAATRTRVETTLLPFVKLRNPRPASVKFITDFARRTGDLEVMSRPDIQLLALT
YELELEQNNGDWRLRKDPNQKGISGKPPGNVGGLEKDSVNVAEDSDGETAVAAAAQGQLE
TTNVSPAETVPEPVPTAMEQTLAAHTEDDSEKAGTWVEVPAKADPTAGVNRKMEKLEVQD
NFQAELTPESAPAEDDGADSDDGWITPSNLKKHQAKDTKEVLPTTAAVSLKVAMLTSDYA
MQNVALRIGLNLLSPAMSRITQVKNWVLRCHGCFQVCKKMDRQFCPKCGQATLTRTSCTT
ADDGSFQIHLKRNFQWNNRGNVFSIPKAVAGTASGKLPSKSAGGKNNWGTKLLFAEDQKE
YERAVEEKRRERKKDLMDEDYMPNIITGERTGSNGKLRLGPGRSVNAKRARS
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtcgacgcccaactttcggcggctgacgcgcagtccactgtcccctccgagaaa
cctacgaccgaacagaggaaacctatacacagcatctgcctcgacacaggcccgttgatc
aagaacgacccccctgtcagcacgctgatcgcccaggcggacgaactctacacactgccg
tcgattattgacgaaattcgcgatgccgctacgcgcacccgagttgagacaacgctactc
ccctttgtgaagttacggaatccccgccccgcgagcgtcaaattcattaccgatttcgcg
cgtcggactggcgaccttgaagtcatgagcaggcccgacattcaactactggcgctcacc
tatgaacttgaactggagcagaataacggcgactggaggctgcggaaggacccgaaccag
aagggtatcagcggtaagccgcctggaaacgtcggcggcctagaaaaagatagcgtcaat
gtagcggaggacagcgacggtgagacggcagtggcggcagcagcacagggccagcttgaa
acgacaaacgtctcgcctgcggagacggtacccgagcccgtgcctactgcgatggagcaa
actcttgcagcgcacacggaagatgatagcgagaaggctggcacttgggtcgaggtacca
gcaaaggccgaccccacagcgggagtcaacagaaaaatggagaaactggaagtgcaagac
aacttccaggctgagctcacgccagagagcgcaccagcagaggacgatggagctgactcg
gacgacggatggatcacaccttcaaatctgaagaagcaccaggcaaaggacaccaaggaa
gttctgccgacgactgccgccgtctctcttaaagtggccatgctgacatccgactacgcc
atgcaaaatgttgctctgcgaatcggcctcaacctcctctccccagcaatgtcacgcatc
acacaggtaaaaaattgggtgcttcgctgccacggctgcttccaggtttgcaagaagatg
gatcgccagttctgccccaagtgcggacaggcaacgctgacgcggacgtcgtgtaccacg
gccgatgatggctcgttccagatccacctgaaacgcaacttccagtggaataatcgtggc
aatgtcttcagcatacccaaggctgtcgcaggcacggccagcggtaagctgccgtccaag
agcgccggtggcaagaacaactggggtacgaagcttctgtttgcggaggaccagaaagag
tacgagagggctgtggaggagaagcgtcgcgagcgaaagaaggatttgatggacgaagac
tatatgcccaacatcatcaccggtgagagaactggcagcaatggcaagttgaggttgggt
cctggtcgtagcgtcaacgcgaagcgcgccaggagctag
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integrated database retrieval system
