Verticillium dahliae: VDAG_05757
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Entry
VDAG_05757 CDS
T03450
Name
(RefSeq) shwachman-Bodian-Diamond syndrome protein
KO
K14574
ribosome maturation protein SDO1
Organism
vda
Verticillium dahliae
Pathway
vda03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
vda00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
VDAG_05757
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vda03009
]
VDAG_05757
Ribosome biogenesis [BR:
vda03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
VDAG_05757
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SBDS_N
SBDS_domain_II
SBDS_C
2L_N_poxvirus
Motif
Other DBs
NCBI-GeneID:
20707220
NCBI-ProteinID:
XP_009653449
UniProt:
G2X6H5
LinkDB
All DBs
Position
4
AA seq
305 aa
AA seq
DB search
MTPIGAGYTRSIRWKGKKRFEIACYKNKVLEYRSGIETDLDNVLQIPSVFLNVSKGQTAP
KEDLEKAFGKGKSTDDVVLEILKKGELQVGEKERAAQLERVQNEVLGIVCSRLVDPRTKR
VYTRGMIEKALDMLSSAAHEGQQQQQAGSKTASGTGTPSGNGGDEEGGAKPRAQHVWTGV
TTTKSAKSQALEAMKALIAAQPIPVQRARMRLRVTCATSVLKQGVKAAKEEGVGEDGAKA
APGTVKDRILGYFEQVESQDVVGSEWEVSGFVEPGAFKGLGDFIGNETRGQGRVEVLDMA
ITHED
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgaccccgattggcgctggttacacaagaagcattcgttggaagggcaagaagcgattc
gagattgcgtgctacaagaacaaggtcctcgaataccgctcgggcatcgagacggacctc
gacaacgtcctgcagatcccctccgtcttcctcaacgtgtccaagggccagacggcgccc
aaggaggatctggagaaggcgtttggcaaggggaaaagcacggatgacgtggtgctggag
attctgaagaagggcgagctgcaggtcggcgagaaggagcgggcggcccagctcgagcgg
gtgcagaacgaggtgctgggcatcgtgtgcagccggctcgtggacccgaggacgaagcgg
gtctacacgaggggcatgatcgagaaggccctcgacatgctgagctcggcggcgcacgag
ggccagcagcagcagcaggccggcagcaagacggcgagcgggacggggacgccaagcggc
aacggaggggacgaggagggcggcgccaagccacgggcgcagcacgtgtggacgggtgtg
acgacgaccaagtcggcgaagagccaggcgctcgaggccatgaaggcgctgatcgcggcg
caaccgatccccgtgcaaagggcgcgcatgaggctgcgcgtgacttgcgcgacgagcgtg
ctcaagcagggtgtcaaggccgccaaggaagagggcgttggggaggatggcgctaaggcg
gcgccgggcacggtcaaggataggattctggggtactttgagcaggtggagagccaggac
gtcgtcggttccgaatgggaggtttctgggttcgttgagcccggtgcgttcaaggggctg
ggtgacttcattggcaatgagacgagaggtcagggtcgtgttgaggtgctcgatatggcc
atcacacacgaggattag
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integrated database retrieval system
