Verticillium dahliae: VDAG_06137 Help Entry VDAG_06137        CDS       T03450                                  Name (RefSeq) cft-1   KO K14401   cleavage and polyadenylation specificity factor subunit 1 Organism vda  Verticillium dahliae Pathway vda03015   mRNA surveillance pathway Brite KEGG Orthology (KO) [BR:vda00001]  09120 Genetic Information Processing   09122 Translation    03015 mRNA surveillance pathway     VDAG_06137  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:vda03021]     VDAG_06137    03019 Messenger RNA biogenesis [BR:vda03019]     VDAG_06137 Transcription machinery [BR:vda03021]  Eukaryotic type   RNA polymerase II system    Other transcription-related factors     Transcription termination factor      VDAG_06137 Messenger RNA biogenesis [BR:vda03019]  Eukaryotic type   mRNA processing factors    3' end processing     Cleavage and polyadenylation specificity factor (CPSF) complex      VDAG_06137 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  CPSF_A MMS1_N Motif Other DBs NCBI-GeneID:  20707600 NCBI-ProteinID:  XP_009657446 UniProt:  G2X8J6 LinkDB All DBs Position 8 AA seq 1445 aa AA seqDB search MQCYTELVPPTLVTCSVSLPFTSPKTENLIVSKGSLLQIFAVKTVSTEIDTSQIQAKSTS NAGETYDRRINDDDGLESAFLGGDGMLMRADRTTNTRLVLVAEYPVHGVIAGLARVKIQS SRSGGEALLVHSRTARLSLLQWDPEKHGVEDISIHFYEKEEWQGSPMDGPLRQHATILQA DPQSRCAALKFGLRKIAFLPFRQIDGDIDMDDWDEEVDGPRPQEEPPAAAAVHGSSSNSS SLAPVPYTPSFVLALPQLDPEILHPVHFAFLHEYREPTLGIISSTNRRLKMEPQKDHFTF KVFTVDLLQKASLNKVIALPKPMGGALLIGENELIHIDQAGKAHGVAVNPYAAKMTKFPL ADQSELKLRLEHCEVELMSPENGEMLLVTRHGEMAVVTFKMDGRSVSGVSVKVVATENGG DVLPFRAACLTKVTKNSMFYGTIGGDSKVIGWSRQHVQTARKKARLLDESLDYDLDDDEA DDDDDDDDDLYGEGTVAPQPSAAAGSAKGGDVVFRVHDSLLSLSPIMDMTYGKTAFFPGS EDAKNSEGVRSELDLVCAVGRHRGGSLALINQHIQPRVIGRFDFPEARGFWTTRVQKTIA KSLQGDKGANLAVGNDYGSVTQYDKFMIVAKVDLDGYETSDVYALTGAGFEALSGTEFDP AAGLTIEAGTMGNDMRIIQVLRSEVRCYDGDLGLSQILPMLDEETGAEPRVISASIVDPY LLLLREDSSILVAQITNHNELEELDKEDETIVSTKWLSGCLYKDSRGLFAPVQTDKGTST SESVFLFLLNAIGELHVRICVYALPNLSKSIYVAAGLSYIPSLLSADYTARRGTSPETLT EILVADLGDSTSASAHLILRHANDDMTIYEPFRIGGQEEKEDLANSLFFKKVSNSHLAKS PVEAAEDEAVQENRVIPLRACDNIGGYSTVFLPGASPSFILKSSKSTPKVIGLQGLGVNG MSSFHTEGCERGFIYADSKGCARVTQFPDAANVAELGVSVRKVPIDTAVSHVAWHPNMEV YAVASSKLEPFELPKDDDYHKEWAKEECPMPPMKEHGSIKLYSPITWNVIDEFELEQYEV AMCMKTLLLEVSEETKERRMLFAVGTAILRGEDLPVRGRILVFDVVHVIPQPDRPETDRK LKLIAKEEIPRGAVTSLCEVGTQGLMLVAQGQKCMVRGLKEDGTLLPVAFLDMSTYVVAV HELRNTGYCLMADANMGVWFVGYSEEPYRMTLFGKSGTQLKCLTADFLVAGNDLSIVASD EDGVLHILQFDPEHPRSLQGHLLLNRASFSVAPNHAWATLVLPRTTTRPYLPQSEPATGA AGSQNRTQTLLLASASGAIASLNPITEHAYRRLTSLTTSLANALPHAAGMNPKAHRLPPQ DGAARPPAVDVSAGRTIVDGALLARWNELGARQRAEAAGKGGFASAADVRGELEDVLGWR GVDYF NT seq 4338 nt NT seq  +upstreamnt  +downstreamnt atgcagtgctacaccgagctcgttcccccgacgctggtgacctgctccgtgtcgcttccc ttcacctcgcccaagaccgaaaacctcatcgtctccaagggctcgctgcttcagatcttc gccgtcaagaccgtgtccaccgaaatcgacacgtcccagatccaggccaagtcaacgagc aacgctggcgagacctatgacaggcgcatcaacgacgacgatggtctcgagtccgctttc ctcgggggcgatggcatgctcatgcgcgccgatcgcacgaccaacacacgacttgtcctc gttgccgaatatcctgtccacggcgtcatcgcagggctggcgcgcgtcaagatccagagc tccaggtcaggaggcgaggctctgctcgtccacagtcgcacggcgcggttgagtctcctg cagtgggaccccgagaagcatggcgtcgaggatatttccattcacttttacgaaaaagag gagtggcagggttcgccgatggacggccccctgcgacagcatgccaccatcctccaagcc gacccgcagtcgcgatgcgccgccctcaagttcggcctgcgcaagatcgccttcctcccc ttccgacagatcgacggcgacatagacatggatgactgggatgaggaggtggacggcccg cggccgcaagaggagccgccagcagctgcggccgtccatggatctagcagcaacagcagc agcttagcacctgtaccatacactccctccttcgtcctcgcgctgccccagcttgatccc gagatccttcaccctgtgcacttcgccttcttgcacgagtaccgcgaacccaccctcggc atcatctcctccaccaaccgccgcctcaagatggaaccccaaaaggaccactttaccttc aaggtctttaccgtcgacctcctccaaaaggcctctctgaacaaggtcatcgctctgccg aagcccatgggtggcgccctcctcatcggcgagaacgagctgatccacatcgaccaggcc ggcaaggcccacggcgtcgccgtcaatccgtacgccgccaagatgaccaagttccccctg gcagaccagtccgagctcaaactgcggctggagcactgcgaggtcgagctcatgtcgcca gagaacggcgagatgctgctcgtgacgcggcacggcgagatggccgtcgtcaccttcaag atggatggccgcagcgtctccggcgtcagcgtcaaggtcgtcgccacggaaaatgggggc gacgtccttcccttccgggccgcgtgcctgaccaaggtcaccaagaacagcatgttttac ggcacgatcggcggtgactctaaagtgatcggctggagcaggcaacatgtgcaaacggca cggaagaaggcgcgtctgttggacgagtcactcgactatgacctcgacgacgatgaagcc gacgacgacgacgacgacgacgacgacctgtacggcgagggcacggtggcccctcaacct tcggctgccgctggatcggccaagggcggagacgtggtgtttcgcgtccacgactcgctg ctcagcctgtcccccatcatggacatgacatatggcaagacggccttcttccccggcagc gaggatgcaaagaactcggaaggcgtgcggtccgagctcgaccttgtgtgtgccgtcgga cggcatcgcgggggctccctggctctcatcaaccagcacattcagcccagggtcatcgga cgctttgactttccagaggctcgtggcttttggacgacgcgcgtgcagaagacgattgcc aagtccctccagggggacaagggggccaatctggccgtcggcaacgactacggatctgtg acgcagtatgataaatttatgatcgtggccaaggtcgacttggacggctatgaaacgtca gacgtctacgcacttacaggtgcaggctttgaggctctctccggcaccgagtttgacccc gccgctggactgacgatcgaggccggaacgatgggcaacgacatgaggatcattcaggtg ctccgttctgaagtccgttgttacgacggagatcttggtctcagccagatacttcccatg ctggacgaggagacgggcgccgaaccgcgcgtcattagcgccagtatcgtagacccctac cttttgcttctgcgcgaggactcgagcattcttgttgcccagattacgaatcacaacgag ctggaggagctcgacaaggaggacgaaacaatcgtctccaccaagtggctcagcgggtgt ctctacaaggactcgcgcggcctttttgcacccgtgcagacggacaaggggacctcgacg agcgagagcgtcttcctgttcttgctcaacgcgataggcgaactccatgtgaggatatgc gtttatgcactgcccaacctctcaaagtccatatacgtcgccgccgggctttcctacatc ccatcccttctttccgcagactacaccgcccgccgaggcaccagtcccgagactctcacc gagatcctggttgctgacctcggagactctaccagtgcatccgcacacctgattctacga cacgccaatgatgacatgacaatatacgagccgttccggatcggcggccaggaggaaaag gaagacttggccaactctctgttcttcaaaaaggtgtccaactcacacctcgccaagagc ccggtcgaggctgctgaggatgaggccgtccaggagaaccgtgtgattcctctacgagct tgtgacaacattggtggttacagcacagtcttcctcccgggagcatccccatccttcatc ctcaaatccagcaagagcacacccaaggtcatcggcctccaaggcctcggcgtcaacggc atgagctccttccacacggagggctgcgagcgcgggttcatctacgccgactccaaaggc tgtgctcgcgtgacgcaatttcctgatgccgccaacgtggccgagcttggcgtgtctgtc cgcaaagtgcccatcgacacggcggtcagccatgtggcgtggcatcccaacatggaggtg tacgctgtggcgtccagcaagctcgagccctttgaactgcccaaggacgacgactaccac aaggagtgggccaaggaggaatgtcccatgccgcccatgaaggagcacggcagcatcaag ctgtactcgccaatcacctggaacgtcattgacgagtttgagctggagcagtacgaggtc gccatgtgcatgaagacgttgcttctcgaagtgtcggaagagacgaaggagcggcgcatg ctcttcgccgtcggcaccgccatcctccgcggagaggacctgccggtccgcggccgcatt ctcgtctttgacgtcgtccacgtcatcccccagccagaccgacccgagacggaccgcaag ctgaagctcatcgccaaggaggagatcccgcgcggcgccgtcacctcgctctgcgaggtg ggcacgcagggcttgatgctggtggcccaaggccagaagtgcatggtccggggtctcaag gaggatggcacgctgctgccggtggcctttctcgacatgagcacctacgttgtcgccgta cacgagctgcgcaacacgggctactgcctcatggcagacgccaacatgggcgtgtggttc gtgggatactcggaggagccctaccgcatgacgctctttggcaagagcggcacgcagctc aagtgtctgacggccgactttctcgtcgccggcaacgacctgagcatcgtggcgtctgac gaggacggcgtgctgcacatcctgcagttcgaccctgaacacccccgatctctccagggc cacctcctcctgaaccgtgcctccttctccgtcgccccgaaccacgcgtgggccaccctc gtcctcccccgaacaacgacgcgtccctacctaccgcaatcggaaccggccaccggcgcc gccgggtcccagaaccgcacgcagacgctcctcctcgcctcggcctccggcgccatcgcc tccctgaaccccatcaccgagcacgcctaccgccgcctgacctcgctgacgacgtccctc gccaacgccctgccgcacgccgccgggatgaaccccaaggcccacaggctgcccccccaa gacggcgccgcgcgcccgccggccgtcgacgtctcggccggcaggaccattgtcgacggc gcgctgctggcgcggtggaatgagctcggcgcgcggcagagggccgaggccgccggcaag ggcgggttcgcttcggcggccgacgtcaggggcgagctcgaggacgtgctcggctggagg ggggtggactatttctag

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