Verticillium dahliae: VDAG_06267
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Entry
VDAG_06267 CDS
T03450
Name
(RefSeq) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
vda
Verticillium dahliae
Brite
KEGG Orthology (KO) [BR:
vda00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vda03400
]
VDAG_06267
Enzymes [BR:
vda01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
VDAG_06267
DNA repair and recombination proteins [BR:
vda03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
VDAG_06267
Prokaryotic type
VDAG_06267
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
BIR
Motif
Other DBs
NCBI-GeneID:
20707730
NCBI-ProteinID:
XP_009657576
UniProt:
G2X800
LinkDB
All DBs
Position
8
AA seq
589 aa
AA seq
DB search
MPLKRGAKRQLSTSAATSDAQPASKKAKDPLREPHPFYKDAEEHGIVLRKYYPHEMSNDR
ARAYNDNELPRPIEELTSALADTSTARKGVKVGAAVVHWFKMDLRLSDNTSLRLASERAK
DAGVPLIAMYIISPQDFEAHLTAPIRVDFTLRTLEVLKHDLAKLDIPLHIETVDKRRQIP
DRIVELMGEWGATHLFANMEYEVDELRREAKLVRTFADKGMSFEAVHDTCVVPPGQLQTG
TGKQYAVYTPWYRSWMRHVHENPDRLELFDHPNKNPSSAKERFGNLFASEIPEEIPNKTL
SAEEKKRFRGLFPAGEHAARERLNKFCDSSISSYADRRNIPGDNGTSSLSMHLASGTISS
RTCVRTARDRNKTKKLDGGNGGIQTWISEVAWRDFYKHVLVHWPYVCMNKPFKPEYANIE
WSYEKDDFKAWCEGKTGFPIVDAAMRQMIHVGWMHNRCRMIVASFLCKDLLIDWRMGERF
FMEHLVDGDFASNNGGWGFSASVGVDPQPYFRIFNPLLQSEKFDPDGEYIRKWVPELAGV
KGKAIHDPYGRGAGPQVKKKGYPEPIVAHKDVRERALTEYKRGLGREDL
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atgcctctcaaacgcggcgcaaagcgccagctgtccacctcagccgccacctctgatgcg
cagccggcgtcaaagaaagcaaaagatcccttgcgcgagccgcatcccttctacaaggat
gcggaagaacatggcatcgttcttcggaagtactaccctcacgagatgagcaatgatcgg
gcccgcgcctataacgacaacgaacttcccaggcccatcgaagaactcacctccgcgctg
gccgatacatccacggctcgtaagggcgtcaaggtgggggctgccgttgtgcactggttc
aagatggatctgagactatcagataacacgtcgctccgcttggcgagcgagagggccaag
gacgccggtgtgcctctgatcgccatgtacatcatcagtcctcaggatttcgaggcccat
ctaacggctcctattcgtgtcgactttacgctacgaacattggaagtcttgaaacacgac
ctcgctaaactggacattccgcttcacattgagactgtggacaagaggagacaaattcct
gatcgcattgtcgaactgatgggagaatggggagcgacacacctcttcgccaacatggag
tacgaagtcgatgagctacggagagaggccaagttggtgcgcacattcgccgacaagggc
atgtcgttcgaagccgtacatgatacctgtgttgtgcccccaggccaattgcagactggc
acaggaaagcagtacgccgtgtatacgccatggtaccgatcttggatgcgccacgtccac
gaaaacccagatcggttggaactatttgaccatccgaacaagaaccctagcagcgcaaag
gagaggtttggcaacctgtttgcgtcggaaatcccggaggagataccgaacaagaccctc
agcgccgaggagaagaagcgcttccgaggacttttcccagccggagaacacgcagctcgc
gaacggctgaacaagttttgtgacagcagcatcagctcatacgcggatcggcgcaacatt
ccaggcgacaacggtacctcttcactctcgatgcatcttgccagcgggaccatcagctcg
cggacttgcgtcaggacagcaagggaccgcaacaagacgaagaaactcgatggtggaaac
ggcggcattcaaacatggatcagcgaggtagcctggcgggacttctataagcatgttctg
gttcactggccatatgtctgcatgaacaagcctttcaaacccgaatacgccaatattgaa
tggtcttatgaaaaggatgatttcaaggcttggtgtgagggaaagacaggtttcccgatt
gttgacgccgccatgcgtcagatgatccatgtgggttggatgcataaccgctgccgcatg
attgtcgcatcctttctctgtaaggatcttctgatcgactggcgcatgggtgagcggttc
ttcatggagcacctcgtggatggtgatttcgcatccaacaacggcggctggggctttagc
gccagtgtcggtgtcgacccgcagccgtactttcgcatctttaaccctttgctacagagc
gaaaagttcgatcccgatggcgagtacattcgcaaatgggtcccagagctagcaggtgtc
aagggcaaggcgatacacgatccatatggacgcggcgcagggccgcaagtgaagaaaaag
ggctatcctgagcctattgttgcgcacaaagatgttcgcgaacgagctttgacagagtac
aaacggggtttgggccgggaggatctgtag
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