Verticillium dahliae: VDAG_06547
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Entry
VDAG_06547 CDS
T03450
Name
(RefSeq) SNF2 family ATP-dependent chromatin-remodeling factor snf21
KO
K11786
ATP-dependent helicase STH1/SNF2 [EC:5.6.2.-]
Organism
vda
Verticillium dahliae
Brite
KEGG Orthology (KO) [BR:
vda00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vda03021
]
VDAG_06547
03036 Chromosome and associated proteins [BR:
vda03036
]
VDAG_06547
Transcription machinery [BR:
vda03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SWI/SNF complex
VDAG_06547
RSC complex
VDAG_06547
Chromosome and associated proteins [BR:
vda03036
]
Eukaryotic type
Chromatin remodeling factors
RSC complex
VDAG_06547
SWI/SNF complex
VDAG_06547
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
Bromodomain
HSA
SnAC
QLQ
ResIII
DEAD
HDA2-3
Motif
Other DBs
NCBI-GeneID:
20708010
NCBI-ProteinID:
XP_009657220
UniProt:
G2X7T9
LinkDB
All DBs
Position
8
AA seq
1426 aa
AA seq
DB search
MASVQVPPAVQHPGAGGMPTGPTQQQAQEVFMKLKAMKERGVPANDPDYIKAQQFLYNFQ
QQAQMRQKQQAWLAQQQQAQAQAKAANGAVNGAQPQNLQQPTPQPTQQGLSAGIGAPKGP
TNATASSPSTQVAPSHFTTQQLALLRQQISVFKLLGKNQGVPEPMQQAIFAQRERRRVIA
AEAVAATSQALDAADAKGADGAAGKKPMKEPTFKTVLSPFEPEGPVPKPISYFNHMKGEN
RILLPAILPTGVDVDQLRRDREMSINNRIRDRYHELRKLPANFAHWNVNSGELTQPDDSA
RIKAIIEMKSLGLYKKQCLLRDRIGKSMMAYDNLAMTTNRSNYRRMKKMTVREARITEKL
EKQQRDARESREKKRHVDFLQAVSQRRNEMMQTTNGQRNKSNRLARLMNTQHTNIEKEEQ
KRIERTAKQRLQALKANDEEAYLKLLDQAKDTRITHLLRQTDGFLRQLAASVKSQQRKAA
AGYDEEEEEEMPMEDDSEADSDEEEKAKKIDYYAVAHRVKEDVTEQASILVGGKLKEYQL
KGLQWMLSLYNNNLNGILADEMGLGKTIQTISLVTYLIERKLQDGPYLVIVPLSTLTNWT
LEFEKWAPSVTKIVYKGPPNARKQQQDKIRQGRFQVLLTTYEYIIKDRPILSKIKWFHMI
IDEGHRMKNQNSKLTATIQQYYHTRFRLILTGTPLQNNLTELWAMLNFVLPNIFKSVKTF
DEWFNTPFANTGGQDKMDLTEEEQILVIRRLHKVLRPFLLRRLKKDVEKDLPDKTEKVIK
CKFSALQTKLYKQMVTHNKIVVSDGQGGKTGARGLSNMIMQLRKLCNHPFVFGEVENVMN
PLNISDDKLWRTAGKFELLDRILPKYKATGHRVLMFFQMTAIMDIMEDYLRYRNFQYMRL
DGTTKSDERSDLLKDFNAPDSPYFMFLLSTRAGGLGLNLQTADTVIIYDSDWNPHQDLQA
QDRAHRIGQKNEVRILRLISSNSVEEKILERARFKLDMDGKVIQAGRFDNKSTETDRDAM
LRTLLESADLADSGDQEEMDDDELNMMLARNDDEVAVFQKMDEERRKDVTNIYVDGPHKK
GKPRLLTDEELPDIYLGDGNPVQEEEETVLGRGARERTKVKYDDGLTEEQWLMAVDDDDD
SPEAAAARKQGRKERREANRLKREAGVQVDDSPTASRASSEEIETPKKRGRKPVVKAVEK
RKADDGDDEPPAKKRRGPTGRGKAVSSGANSVLAQQRGQLNKSLRSLFDGLMTLEVDDPE
PVPPEDDESDPGKRIIIGPFLVLPPKRDFPDYYILITQPISMKQIETKIKKEKYNSLGDL
KTDVDLMFSNCQTYNEEASLLYQDAQTLQNFFHDEMAKELEKHPGLKELEADTGSKEQSV
APSTGAATPQTSASGPTRIKLISSSSAAAAKESAPASANGGGSDAE
NT seq
4281 nt
NT seq
+upstream
nt +downstream
nt
atggcttcagtacaggtccctcccgccgtccagcacccgggcgccgggggcatgcccacc
gggccaacacagcagcaggcgcaggaggtgttcatgaagctcaaggccatgaaggagcgc
ggcgtgcctgccaacgaccccgactatatcaaagcgcagcagttcctctacaacttccag
cagcaggcccaaatgcgacagaagcaacaagcatggctcgcgcaacaacaacaggcccaa
gcacaagcaaaggccgccaacggcgctgtcaatggcgcccagccacaaaatctgcaacaa
ccaacaccccagccgacacaacagggcctgtctgccggcatcggcgcgcccaagggcccg
acaaacgcgacagcgagctcgccctctacacaagttgccccgagtcactttacaacacag
cagttggctctgctgcgccagcaaatctcagtctttaagttgcttggaaagaaccagggc
gtgcccgaaccgatgcagcaagccatctttgcgcaacgcgagcgcaggagagtcatcgct
gcagaggcagtagccgcgacttcgcaggcgcttgacgcagctgatgctaagggcgccgat
ggcgcggcgggaaagaagcccatgaaggaaccgaccttcaagacggtcctttcgccattc
gagcctgaaggcccagtcccgaagcctatcagctacttcaaccacatgaagggcgagaac
cgcatcctcctcccggccatcctgcctactggcgttgatgtcgaccagctcaggcgtgac
agggagatgagcattaataaccggattcgcgacaggtaccacgagctgaggaagctgcct
gccaatttcgcccactggaacgtcaactctggggaactcacccagcccgacgacagcgcc
aggatcaaggccatcattgagatgaaatctttaggtctctacaagaagcaatgtctcttg
cgagacaggatcgggaagagtatgatggcgtacgacaacctcgccatgacgacaaaccgc
agcaactaccgtcgcatgaagaagatgacggtacgcgaggcacgcattaccgagaagctc
gagaagcagcagcgcgacgcccgcgagagccgtgagaagaagcgccatgtcgacttcctc
caggctgtcagccaacgtaggaacgagatgatgcagacgaccaacggccaacgcaacaag
tcgaacaggctcgccaggctcatgaacacccagcacaccaacattgaaaaggaggagcag
aagcgcatcgagcgcacagccaagcagcgtttgcaggccttgaaagccaacgacgaggag
gcttacttgaagctgctcgaccaagccaaggatacccgtatcacccaccttctccgacag
accgacggtttcctcaggcagctcgccgcatccgtcaagtcacagcagcgcaaggcagct
gccggctacgacgaagaagaggaagaggagatgcccatggaggatgacagcgaagccgac
tcggacgaagaggagaaggccaagaaaattgactattacgccgtcgcccatcgcgtcaag
gaagacgttactgagcaggcttccatcctcgttggtggtaagctcaaggagtaccagctc
aagggtcttcaatggatgttgtcgctatacaacaacaacctgaatggtatccttgctgac
gagatgggtctcggaaaaaccattcagaccatcagtcttgttacctacctcatcgagcgg
aagctgcaagacggtccttacctcgtcattgtacccctgagtactcttacgaattggaca
cttgaatttgaaaagtgggccccttctgtcaccaagatcgtgtacaagggtccaccgaac
gcgcgaaagcagcaacaggacaagattcgccaaggccgattccaggtgctcctgacaacg
tacgagtacatcatcaaggacaggccgattctcagcaagatcaagtggttccacatgatt
atcgacgagggccatcgcatgaagaatcaaaactccaagctcacggcgaccattcagcag
tactaccacacccgcttccgtctcattctcacgggtacaccgcttcagaacaacctaaca
gaactctgggccatgctcaactttgtcctgcccaacattttcaagtcggtcaaaaccttc
gacgagtggttcaacacaccattcgccaacacgggcggccaggacaagatggacctcaca
gaagaagaacagattctggtcattagacgtcttcacaaggtgcttaggccgttcctgctg
cgtcgtctgaagaaggatgtcgagaaggaccttccggacaagacggagaaggtcatcaag
tgcaagttctcggccctgcagaccaagctgtacaagcagatggtcacgcacaacaagatt
gtcgtgtcggacggccagggcggcaagactggcgctcgcggtctcagcaacatgatcatg
cagctgcgcaagctctgcaaccatccgtttgtctttggcgaggtcgaaaacgtcatgaac
cccctgaacatcagcgacgacaagctctggcgtacggctggcaagttcgagcttcttgat
cgtatcctgcccaagtacaaggcgacggggcatcgcgtgctcatgttcttccagatgacg
gccatcatggacatcatggaggactatctgcgttaccggaacttccagtacatgcgtctg
gacggtacgaccaagtcagacgagcgatcggacctcctgaaggacttcaacgcacccgac
tcgccatacttcatgttcctgctgtcgacgcgtgccggtggtctcggtctcaacctgcag
acggccgacactgtcatcatttacgactcggattggaacccgcatcaggatctgcaggct
caagatcgtgcgcatcgtatcggtcagaagaacgaggtccgtatcttgcgtcttatcagc
tccaactcggttgaagaaaagatcctggagagggcgcgcttcaagctcgacatggacggc
aaggtcattcaggccggtcgtttcgataataaatcgaccgaaacagaccgtgatgcaatg
ctgcgaacccttctggagtcggccgacttggcggattcgggcgaccaggaggaaatggat
gatgatgagctgaacatgatgctggctcgaaatgacgatgaggtggccgtcttccagaag
atggacgaggaacgcagaaaggatgtgacgaacatctacgtcgacggacctcacaagaag
ggcaagccccgtctgctcaccgacgaggaactgcccgatatctatctcggcgacggcaac
ccggtgcaagaggaggaggagacggtgcttggccgtggtgcgcgtgagcgtaccaaggtc
aagtatgacgatggcctgaccgaggagcagtggctgatggctgtcgatgacgacgacgac
agtcccgaagctgccgcagcacgcaagcaaggccgtaaagagcgacgtgaggccaaccgc
ctcaagcgagaggctggtgtgcaggtcgacgactcgccaacggccagccgtgccagcagc
gaggagattgagacacccaagaagcgcgggcgcaagcctgtggtcaaggcagttgagaag
cgcaaggccgacgacggcgacgatgagccgccggccaagaagagacgcggtccgacaggc
cgcggcaaggcggtctcatcaggtgccaactctgtgctggcacagcaacgcggccagctc
aacaagagtctccggtcgctgttcgacggcctcatgacgcttgaggtggacgatcccgag
cctgtgccgcctgaagacgacgagtcggatcccggcaagcgcatcattattgggcctttc
ctggtgctgccaccgaagcgtgacttcccggattactacatcttgattacgcagcccatt
tcgatgaagcagattgaaaccaagatcaagaaggagaagtacaacagcctcggcgatctc
aagacggacgtcgacctcatgttctccaactgtcaaacgtacaacgaagaagcgtcgctg
ctgtaccaggacgcgcagacactacagaacttcttccacgacgaaatggcaaaggagctc
gagaagcaccccggcctcaaggagctcgaagcggatacggggagcaaagagcaatccgtg
gcaccgagcacaggcgcagcgacgccacagacatcagcaagcggaccgaccaggatcaag
ctcatatcttcttcgtcggcggcggcggccaaggaatcggccccggcttcagcgaacgga
ggcggtagcgacgcggagtaa
DBGET
integrated database retrieval system
