Verticillium dahliae: VDAG_06557
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Entry
VDAG_06557 CDS
T03450
Name
(RefSeq) ATP-dependent RNA helicase dbp9
KO
K14810
ATP-dependent RNA helicase DDX56/DBP9 [EC:
5.6.2.7
]
Organism
vda
Verticillium dahliae
Brite
KEGG Orthology (KO) [BR:
vda00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vda03009
]
VDAG_06557
Enzymes [BR:
vda01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
VDAG_06557
Ribosome biogenesis [BR:
vda03009
]
Eukaryotic type
Pre-60S particles
Helicases
VDAG_06557
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
Motif
Other DBs
NCBI-GeneID:
20708020
NCBI-ProteinID:
XP_009657230
UniProt:
G2X7U9
LinkDB
All DBs
Position
8
AA seq
609 aa
AA seq
DB search
MKRKIDQTEEPEVAATPTKKPSETKATWDNLGLSPRLLQGVAQLNWHNPTDIQAKAVPLA
LEGRDILAKSGTGTGKTAAYVLPVLEKVLQRKEKEAKGAAAATSVLMLVPTRELADQVHR
SIESLAAFCAKDIQAVKLTDKVSTTVQRALLSANPDIVISTPARAWDNVSSSALSLANLT
HLVLDEADLVLSYGYKEDLQNVARSLPKGVQTILMSATLTPEVDTVKGLFCRNPALLDLE
QPEAEGDGITQFVVKCAEDEKFLLIYVIFKLKLIQGKALVFCHDVDRSYKLKLYFEQFGI
RSCILNAELPVNSRLHVVDEFNKGVYDILIASDDNEVVGDEGQEDEGEEETTEEPKKEAK
KSKKTQQQQQQRASRKDKEYGVSRGIDFKNVAAVINFDLPTSAKSYTHRIGRTARAGQRG
MALSFVIPAQHYRGHPPSSVESAEHDEKILARIEKQQAKKGKEVKPYHFDMAQVSAFKYR
MDDALRAVTRVAVREARTRELRQELIKSDKLRRHFEENPQELAHLRHDGELRAARMQPHL
RHVPDYLLPADGKKGLTADEVGFVPLRKKNDRRNSSRRAGGKKNSNRVFKVGRKKSDPLK
SFKAKAAKK
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgcaagatcgaccagactgaagagcccgaggtggctgcgacaccgacgaagaag
ccctccgagacgaaagcgacatgggacaacctgggcctgtccccaagacttctccaaggc
gtggctcagctcaactggcacaaccccacagatatccaggccaaggctgtgcctctcgca
ctcgagggacgtgacatcctcgcgaagagcggcacgggtaccggcaagacggccgcctat
gttctgcccgtcctcgagaaggtcctgcaaaggaaagagaaggaggccaagggggccgcc
gccgccacatcggtcctcatgctcgttcccacgcgagagctcgccgaccaggttcacagg
tcaatcgagtcgctcgcggctttctgcgccaaggatatccaggccgtcaagctcaccgac
aaggtctcgaccaccgtccagcgtgcgctcctctccgcaaaccccgacattgtcatctcg
acccccgccagggcgtgggacaacgtcagctcatccgccctatcgctcgccaacctcacc
catctcgtcctcgacgaggccgatctcgtgctgagctacggctacaaggaggatcttcag
aacgtggcgcggtcgctgcccaagggtgtgcagacgatcctcatgagtgcgacgttgacg
ccagaggtcgacacggtcaaggggctgttctgcaggaaccccgcgctgctcgacctcgag
cagcccgaggcggagggcgatggcatcacacagttcgtcgtcaagtgtgccgaggatgaa
aagttcttgctcatctacgtcatcttcaagctgaagctgatccagggcaaggcgctggtg
ttttgtcacgacgtcgaccgctcgtacaagctgaagctgtactttgaacagtttggcatt
cgcagctgtatcctgaacgcggaactgcccgtgaacagccgtctccacgtggtcgacgag
ttcaacaagggtgtgtacgacatcctcatcgcgtcagacgacaacgaggtggtcggcgac
gaaggccaagaggacgaaggcgaggaggagacgacagaggagccgaagaaggaggccaag
aagtccaaaaagacccagcagcagcagcaacagcgtgcctcgcgcaaagacaaggagtat
ggcgtctcccgtggcatcgacttcaagaacgtcgccgccgtcatcaactttgacctgccc
acgagcgcaaagtcctacacccaccgcatcggccgcaccgcccgcgccggccagcgcggc
atggccctgtccttcgtcatcccggcgcagcactaccgcggccacccgccctcgtcggtc
gagtcggccgagcacgacgagaagatcctcgcgcgcatcgagaagcagcaggccaagaag
ggcaaggaggtcaagccgtaccactttgacatggcccaggtgtcggccttcaagtaccgc
atggacgacgcgctgcgcgccgtgacgcgcgtcgccgtgcgcgaggcccgcacgagggag
ctcaggcaggagctcatcaagagcgacaagctgaggcgccactttgaggagaacccccag
gagctcgcgcacctgcgccacgacggcgagctgcgcgccgcgaggatgcagccgcatctc
aggcacgtgccggactacctgctcccggccgatggcaagaagggactgacggcggacgag
gtgggcttcgtgccgctgaggaagaagaatgaccgccgcaacagcagccgtcgggcgggc
gggaagaagaacagcaacagggtgttcaaggtcgggaggaagaagagcgacccgttgaag
tcgttcaaggccaaggcggcgaagaagtaa
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