Verticillium dahliae: VDAG_06648
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Entry
VDAG_06648 CDS
T03450
Name
(RefSeq) nucleolysin TIA-1
KO
K13201
nucleolysin TIA-1/TIAR
Organism
vda
Verticillium dahliae
Brite
KEGG Orthology (KO) [BR:
vda00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vda03019
]
VDAG_06648
03041 Spliceosome [BR:
vda03041
]
VDAG_06648
Messenger RNA biogenesis [BR:
vda03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
VDAG_06648
Spliceosome [BR:
vda03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
VDAG_06648
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_MUD2_C
RRM_occluded
RRM_5
RRM_7
Motif
Other DBs
NCBI-GeneID:
20708111
NCBI-ProteinID:
XP_009657647
UniProt:
G2X916
LinkDB
All DBs
Position
8
AA seq
489 aa
AA seq
DB search
MADNGTNAAQLPPPPQSNQGAPGYENGQKPPPPLHIPQNNNPIPTAITSPLSGVDQALSP
GSAGGFGRRAAPEPNKRALYIRGPRPARNGRCPAADIRDDWPCPERQDHPRQERKLHFSC
LGTRRAADTIFQQKGYNYGFVEYDDPGAAERAMQTLNGRRVHQSEIRVNWAYQSNTTSKE
DTSNHFHIFVGDLSNEVNDEILSQAFAAFGSVSEARVMWDMKTGRSRGYGFVAFRDRPDA
EKALSSMDGEWLGSRAIRCNWANQKGQPSIAQQQAMQAMGMTPTTPFGHHQFPAHGMASY
EVILAQTPNWQTTVYVGNLTPYTTPNDVVPLFQNFGFVVESRFQADRGFAFIKMESHEAA
AMAICQMNGYNVNGRPLKCSWGKDKTPNAAGGFDPAQQGYSPQSATAPGAYPGTPTAYFP
QYGAQYSGQPGNYGGPAAQSPAGYGAQPMAYGGPQSAGGYGRGQQPPSGQWQQGPQGQAF
NNGYGGYQG
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atggccgacaacgggaccaatgcagctcagctgcctccccctcctcagtccaaccagggc
gcacctggctatgaaaatggccagaagcctccccctcccctgcacatcccgcagaacaac
aatcccatcccgacagccatcacctcacctttgtctggcgttgaccaggctctttcgcct
ggcagcgctggaggctttggccgccgtgctgctccggagcccaacaagcgtgccctctac
atccgggggcctcgaccagcgcgtaacggaagatgtcctgcggcagatattcgagacgac
tggccatgtccagaacgtcaagatcatccccgacaagaacgtaagcttcacttctcgtgt
cttggcacacgacgcgcagctgacacgatttttcagcaaaagggctacaactacggtttc
gtcgagtacgacgatcctggtgcggccgagcgcgctatgcagaccttgaacggacgtcgt
gttcaccaatctgaaatccgcgtcaactgggcttaccagtccaacacaacgagcaaggag
gacacctcgaaccacttccacatcttcgtgggcgacttgtcgaatgaggtcaatgacgag
attctttctcaagcctttgctgccttcggatccgtctctgaggctcgtgtcatgtgggat
atgaaaactggccgatcccggggttacggatttgtcgccttccgggaccgccctgatgcg
gagaaggctctgagctccatggatggcgaatggctgggttcccgcgctatccgctgcaac
tgggcgaaccagaagggccagccctcgattgcccagcagcaggccatgcaggccatgggc
atgaccccgacgacccctttcggtcaccaccagttccccgcgcatgggatggcctcctac
gaggtcattctggctcagaccccgaactggcagacgaccgtctacgttggcaacctcact
ccttacactacccctaacgacgttgtaccgctcttccaaaatttcggcttcgtcgtcgag
tctcgtttccaggcagaccgtggattcgctttcatcaaaatggagagccacgaggctgcc
gctatggccatttgccagatgaacggctacaacgtcaatggccggcccctgaaatgcagc
tggggcaaggataagacacccaacgccgcgggtggcttcgaccctgctcagcagggctac
agcccgcagagcgccactgctcctggtgcctaccccggaacgcccactgcgtacttcccg
caatacggtgcgcaatacagcggtcagcctggtaactacggaggaccggctgctcagtca
ccggccggctacggagctcaacccatggcatacggtggaccccagagtgcaggtggctac
ggccgtgggcagcagccccccagcggccagtggcagcaaggacctcagggtcaggctttc
aacaacggctacggcggttaccaaggttaa
DBGET
integrated database retrieval system
