Verticillium dahliae: VDAG_06800
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Entry
VDAG_06800 CDS
T03450
Name
(RefSeq) hypothetical protein
KO
K12620
U6 snRNA-associated Sm-like protein LSm1
Organism
vda
Verticillium dahliae
Pathway
vda03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vda00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
VDAG_06800
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vda03019
]
VDAG_06800
Messenger RNA biogenesis [BR:
vda03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
VDAG_06800
mRNA degradation factors
5'-3' decay
Lsm complex
VDAG_06800
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
20708263
NCBI-ProteinID:
XP_009657799
UniProt:
G2X9G8
LinkDB
All DBs
Position
8
AA seq
177 aa
AA seq
DB search
MEHLSIEDPSHQGQPVLGGGVPPPQQQQQLPPQMFTTAAQLLDLTDSKGASLNVGERRAN
LVLQNTVERVFAPHPAPPRSDAAAATTPSPDQQPRGGLYADIKRGVFLVRGENVLLLGEI
DLDKDDDPPPGYELGEPEVVHRLAEARKDADKGKEKARLRKLARSGFEGENMGEILL
NT seq
534 nt
NT seq
+upstream
nt +downstream
nt
atggagcacctctccatagaagacccctcccaccagggccagccggtcctgggcggcggc
gtccctcccccgcaacagcagcagcagctgccgccgcagatgttcacgacggccgcccag
ctcctcgacctcaccgacagtaagggcgcctctttgaacgttggcgagagacgggcaaac
ctcgttctccagaacacagtcgagcgcgtcttcgccccgcacccggcgccgccgcgcagc
gatgccgcggcggcgacgacgccgtcaccagaccagcagccgcgcggcggcctctacgcc
gacattaagcgcggcgtcttcctcgtgcgcggcgagaacgtgctgctcctcggcgagatt
gacctcgacaaggacgacgacccgccgccgggctacgagctcggcgagcccgaggtcgtg
caccgccttgccgaggcgcgcaaggacgccgacaagggcaaggagaaggcgaggctgcgc
aagctggcgcggagcggctttgagggcgagaacatgggcgagatactcctgtga
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