KEGG   Verticillium dahliae: VDAG_06800
Entry
VDAG_06800        CDS       T03450                                 
Name
(RefSeq) hypothetical protein
  KO
K12620  U6 snRNA-associated Sm-like protein LSm1
Organism
vda  Verticillium dahliae
Pathway
vda03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:vda00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    VDAG_06800
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:vda03019]
    VDAG_06800
Messenger RNA biogenesis [BR:vda03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     VDAG_06800
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     VDAG_06800
SSDB
Motif
Pfam: LSM
Other DBs
NCBI-GeneID: 20708263
NCBI-ProteinID: XP_009657799
UniProt: G2X9G8
LinkDB
Position
8
AA seq 177 aa
MEHLSIEDPSHQGQPVLGGGVPPPQQQQQLPPQMFTTAAQLLDLTDSKGASLNVGERRAN
LVLQNTVERVFAPHPAPPRSDAAAATTPSPDQQPRGGLYADIKRGVFLVRGENVLLLGEI
DLDKDDDPPPGYELGEPEVVHRLAEARKDADKGKEKARLRKLARSGFEGENMGEILL
NT seq 534 nt   +upstreamnt  +downstreamnt
atggagcacctctccatagaagacccctcccaccagggccagccggtcctgggcggcggc
gtccctcccccgcaacagcagcagcagctgccgccgcagatgttcacgacggccgcccag
ctcctcgacctcaccgacagtaagggcgcctctttgaacgttggcgagagacgggcaaac
ctcgttctccagaacacagtcgagcgcgtcttcgccccgcacccggcgccgccgcgcagc
gatgccgcggcggcgacgacgccgtcaccagaccagcagccgcgcggcggcctctacgcc
gacattaagcgcggcgtcttcctcgtgcgcggcgagaacgtgctgctcctcggcgagatt
gacctcgacaaggacgacgacccgccgccgggctacgagctcggcgagcccgaggtcgtg
caccgccttgccgaggcgcgcaaggacgccgacaagggcaaggagaaggcgaggctgcgc
aagctggcgcggagcggctttgagggcgagaacatgggcgagatactcctgtga

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