Verticillium dahliae: VDAG_06865
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Entry
VDAG_06865 CDS
T03450
Name
(RefSeq) DNA repair protein rad50
Organism
vda
Verticillium dahliae
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_23
AAA_21
SbcC_Walker_B
SMC_N
AAA_29
AAA_13
AAA_16
ABC_tran
Motif
Other DBs
NCBI-GeneID:
20708328
NCBI-ProteinID:
XP_009657864
UniProt:
G2X9N3
LinkDB
All DBs
Position
8
AA seq
1292 aa
AA seq
DB search
MSKIEKLSVQGIRSFGTGSGRETMQFFTPLTLIVGYNGSGKTTIIECLKYATTGEQPPNS
KGGAFVHDPKLVGEKEVLAQVKLAFTSTTGVKHVVTRSLQLTIKKTTRSLKTLEGSLATN
NNGERSVLSTRVAQMDEAVPALLGVSTAILDYVIFCHQDESLWPMSEPGALKKQFDQIFE
AMRVHESHRQPQARTRSTRRKATAPEKRSMELQAEIEGSREACNGMNDEMAELSAQIKQK
RLEANKFLNIVNDLKYKKEQFTFRQGAVSDLQTTLEELEEDDETLQTNLSQYEERMARFQ
TEERQNRSQYTQLQNDLGRSRNDLSAKLSEKGKHQSDKDKYERQLASRVDLIHEAAELHG
FRGFDGDLKDTQIKSFNDRIQKLLADKKRDLERIQKENAQELDKATGIITDLEGRKSTMT
QNRVFAKQRMGAIEKRTAVIQNDINTLDVDEGAKAILDSQFEDIEGRLAKTTESIDSAGF
DGQIEQENEKLYQLESENDKLGRELMEATRLASERAQLEYRKKELVDRKRKLETLTSTWK
EKLDAQIGSEWQAETIEPQFQSVLKKQSQLVAQARQKRDTAREKQQKIDFSLKSARDAQQ
KKSDEISRCHDRVLDVLKQVRDEATIDDYAEEVKLLEEDVEAYSTDISLLEALSDYYKQC
QETLTKKNKCKLCDRGFDDKQSVNKSRFSDKLIKYLDPSKKEKASEDLEKSKATLDKLRQ
VRVQHETYERSLGELPGLKEACKTLEAELETHERQLEEHDENVNAEEAKQADVEALNKTV
MNISQTLKDMKDSEAQVERIMSQQSSGMATRTADAIHELQATCKEQMRSTKARLTKITTD
RQRMRDQLNSLELERSELKNKLSKVQSQLERKKDFQNQIQALKEDQANQRELIQKADQDL
EVIEPSIAEARAVRDDTLQRGRAKEKAIVEERDLVANSVTELKMVESDIQDYMDRGGPSN
LAANQRAIDGLEKTIAATEQEISDLTVRTNKLKQDIDNGDRKKQNISNNLKFRQNKRQLD
VLRAEIDDLQSCDADDDYDRLNDEAVQLENRHNMLVAERGSLMGQMKTKDEELARLLGRV
GKWDYRDASKKYRESHIKVETTKAAIEDLGRYGAALDKAIMQYHGLKMEEVNRIAGELWQ
STYQGTDIDTILIRSDNEGATGRRSYNYRVCMVKQDTEMDMRGRCSAGQKVLASIIIRLA
LAESFGVNCGLIALDEPTTNLDKDNIKSLAESLHHIIKSRQAQSNFQLIVITHDEEFLRH
MRCSEFCDSFFRVKRDDKQCSVISRESITRVL
NT seq
3879 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagattgaaaagctgtccgtccagggcatccggtccttcgggaccggcagtggc
cgcgagaccatgcaattcttcacgcccctgaccctcattgtcggttacaatggttcgggc
aagacgaccattatcgaatgcctcaagtacgccaccaccggcgagcagccccccaacagc
aagggcggtgcattcgtccacgaccctaaactcgtcggcgagaaggaggtcctggcgcag
gtcaagctggcattcacctcgaccaccggcgttaagcatgtcgtcacacgaagtcttcag
ttgaccatcaagaaaaccacccgctccctcaagaccctcgagggctcactagcgacaaac
aacaatggcgaacggtccgttctctcgacacgagtggcgcagatggacgaggctgtccct
gctctcctcggcgtttcgaccgccattctggactacgtcatattctgccatcaggacgaa
tctctgtggcccatgagcgagcccggcgccctgaagaaacagtttgaccaaatctttgaa
gccatgcgggtacacgaaagccatcgacaacctcaagccaggacaagatcaacaaggaga
aaggcgaccgcgcccgagaaaagatccatggagcttcaagccgagattgagggatcaagg
gaagcatgcaacggcatgaatgatgagatggccgagctctcggcgcagatcaagcagaaa
aggctcgaggccaacaagttcttgaacattgttaatgacctcaaatacaaaaaggagcag
tttacattccgtcagggcgccgtctcggaccttcagactactctggaggagctcgaagaa
gacgatgagacgctgcaaaccaatctatcgcagtatgaggagcgcatggcacgcttccag
actgaagagcgccagaacagatcgcagtacacacagctccagaacgatctaggcaggtcg
aggaatgacttgtcggcaaaactttccgagaagggcaaacaccagtcggataaggacaag
tacgaacgtcagcttgcctcgcgtgtcgacctgattcacgaagctgctgagctgcacggc
ttccgaggttttgacggcgatttgaaagacacgcaaatcaagtcgttcaacgacaggata
caaaagcttctagccgacaagaaacgggatctcgagcgcattcaaaaggaaaatgctcag
gagcttgacaaggccactggcatcatcactgacctcgagggccgcaaatctaccatgact
cagaatcgcgtgttcgcgaagcagcgcatgggtgccatcgagaagcgtaccgctgtcatc
caaaatgatatcaacacattagatgtcgatgaaggtgccaaggctatattggatagtcag
ttcgaagatatcgagggccggctggcgaagacgaccgagtcaatcgacagcgctgggttc
gatggtcaaatcgagcaggaaaacgagaagctctatcaattggagagtgaaaatgacaaa
ctgggccgagagctgatggaggccacgcgtctagcttccgagcgagcccagctggaatac
cgaaaaaaggagctggttgaccgcaagagaaagctggagactctcacaagcacgtggaag
gagaagcttgacgcacagatcggcagtgagtggcaagcggagacgattgaaccacagttc
cagtcagtgctcaaaaagcagtcacagcttgttgcacaggcgcgccaaaaacgggacacg
gcacgcgagaagcaacaaaaaatcgactttagcctgaaatcagcgcgggacgcacaacaa
aagaagtcagacgagatttctcgctgtcacgacagggtcctcgacgtcttgaaacaggtc
agggatgaggccaccatcgacgactatgctgaggaggtcaaacttcttgaggaggacgtt
gaggcctactcgacggacatcagccttctggaggcgttgtctgattactacaagcaatgt
caggagacattgaccaagaagaacaagtgcaagctgtgtgacagaggtttcgacgacaag
cagagcgtcaataagtcgcgtttctcagacaagcttatcaaatatcttgacccttcgaag
aaagagaaggccagtgaggacctcgaaaagtccaaggcgacgctcgataagttgcggcaa
gtcagagttcaacacgaaacgtacgagcggtccctgggcgagctaccgggtctgaaagaa
gcgtgcaaaactcttgaggctgagcttgaaacccacgagaggcagcttgaagagcatgat
gaaaatgtcaatgccgaagaggcgaaacaggccgatgttgaggccttgaacaagaccgtc
atgaacatctctcagactctcaaagacatgaaggattccgaggcccaggtggagcggatc
atgtcgcaacagtcatctggcatggctacgagaactgctgatgcaatacatgagctgcag
gcaacctgcaaagagcagatgcggtcgacgaaagctcgcctcaccaagattacaactgac
cgacagaggatgcgagaccagctcaacagcctagaactagaaaggagcgagctgaaaaac
aagctcagcaaggtgcagagtcaattggagcgcaaaaaggacttccagaaccagattcaa
gctttgaaagaggatcaagccaaccaacgggagctcattcagaaggctgaccaagacctg
gaggtcatcgagccttcaatcgcagaggctcgcgcagtgcgggatgatacgctccagcgc
ggccgcgcgaaagaaaaggccatcgtagaggagcgcgatttggttgccaactcggttact
gagctcaagatggtcgagagcgacattcaggactacatggaccgtggggggccttccaac
ctcgccgcgaaccagcgcgccattgatggccttgaaaagacgattgccgccacggaacag
gaaatatccgatctcacggtccggacgaacaagttgaagcaagacatcgataatggcgac
cggaaaaagcaaaacatcagcaacaacctgaagttccgccagaacaagcgtcaactcgat
gtgcttcgcgctgagattgacgatctccaatcctgcgacgccgacgacgactacgacagg
ctcaatgacgaggcggtccaactagagaaccgtcacaacatgctagtagccgaacgcggc
tccctcatgggccagatgaagaccaaggacgaggagcttgcgcggcttcttgggcgagtg
gggaaatgggactaccgggacgcttccaagaagtatcgagagtcccacatcaaggtcgag
acgaccaaggcggcaatcgaggatctcggtcgctacggcgcggcactcgacaaggccatc
atgcagtaccacggcctgaagatggaagaagtcaaccgcatcgccggcgagttgtggcag
agcacataccaaggtaccgacattgatacgattctcattcggtccgacaacgaaggtgcc
acagggcggcgctcgtacaactaccgcgtgtgcatggtcaagcaggacaccgagatggac
atgcgcgggcgctgctcagctggccagaaggtgctcgccagcatcatcatccgcctcgcg
ctggcggagtctttcggcgtcaactgcggcctcatcgcactcgacgagccaaccaccaac
ctcgacaaggacaacatcaagtctctcgccgagagcttgcatcacatcatcaagtcacgc
caggcgcagagcaacttccagctcatcgtcatcacccacgacgaggagtttcttcgacac
atgcggtgcagcgagttctgcgacagcttcttccgcgtgaagcgtgacgacaagcaatgc
agcgttatttcgcgagagagcattacgagggtgctgtaa
DBGET
integrated database retrieval system
