KEGG   Verticillium dahliae: VDAG_07058
Entry
VDAG_07058        CDS       T03450                                 
Name
(RefSeq) replication factor C subunit 5
  KO
K10756  replication factor C subunit 3/5
Organism
vda  Verticillium dahliae
Pathway
vda03030  DNA replication
vda03410  Base excision repair
vda03420  Nucleotide excision repair
vda03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:vda00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    VDAG_07058
   03410 Base excision repair
    VDAG_07058
   03420 Nucleotide excision repair
    VDAG_07058
   03430 Mismatch repair
    VDAG_07058
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:vda03032]
    VDAG_07058
   03036 Chromosome and associated proteins [BR:vda03036]
    VDAG_07058
   03400 DNA repair and recombination proteins [BR:vda03400]
    VDAG_07058
DNA replication proteins [BR:vda03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    VDAG_07058
  DNA Replication Termination Factors
   ELG1-RFC complex
    VDAG_07058
Chromosome and associated proteins [BR:vda03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    VDAG_07058
DNA repair and recombination proteins [BR:vda03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     VDAG_07058
  Check point factors
   HRAD17(Rad24)-RFC complex
    VDAG_07058
SSDB
Motif
Pfam: RFC_C DNA_pol3_delta2 AAA_22 RCF1-5-like_lid AAA AAA_16 Rep_fac_C AAA_24 AAA_33 DUF6842
Other DBs
NCBI-GeneID: 20708521
NCBI-ProteinID: XP_009654258
UniProt: G2XAF5
LinkDB
Position
5
AA seq 350 aa
MALIVDKHRPKSLDALTYHPELSDRLSSLRRLPPTSLVYGPSGAGKKTRIVATLKELYGS
GVEKIKIDARVFQTSSNRKLEFNIVASNYHLEITPSDVGNYDRVVVQDLLKEVAQTQQVD
QAARQRFKVVVINEADHLTRDAQAALRRTMEKYSPNLRLILLANSTANIIAPIRSRTLLV
RVAAPTHAEICDVLGQSAEREGWPVAKGLHMRIAQESGRNLRRALLMYEAVHAQNEKVTD
ATRIPPPDWEALIGQIAKEIMEEHTPARILQVRAKLYDLLTHCIPATTILKTLTFKLVAM
IDDALKPEVIKWSAYYEHRIRMGTKVIFHLEAFVAKFMRIIEIYLMSMDL
NT seq 1053 nt   +upstreamnt  +downstreamnt
atggctctcattgtcgacaaacacaggccaaagtctttggacgccctcacctaccaccca
gagctgtccgacaggttaagctccctccggcgacttccccccacctccctcgtctacggc
ccctcgggcgcgggcaagaagacgcgcatcgtagcgacgctgaaggagctctacgggtcc
ggcgtcgagaagatcaagatcgacgcccgcgtcttccagacgtcgagcaaccgcaagctc
gagttcaacatagtggcgtccaactaccacctcgaaatcacgccctcggacgtcggcaac
tatgaccgcgtcgtggtgcaggacctgctgaaggaggtggcgcagacgcagcaggtcgac
caggcggcgcggcagcgcttcaaggtcgtcgtcatcaacgaggccgaccacctgacgcgc
gacgcgcaggcggcgctccgtcgcacgatggagaagtactcgcccaacctgcgcctcatc
ctcctggccaactcgacggccaacatcatcgcgcccatccgctcgcggacgctgctcgtg
cgcgtggcggcgccgacgcacgccgagatttgcgacgtgctgggccagagcgccgagagg
gagggctggcctgtggccaaggggctgcacatgaggatagcgcaggagagcgggaggaat
ctgcggcgggcgctgctcatgtacgaggctgtgcatgcgcaaaatgagaaggtgacagac
gcgacgcggatcccaccacccgactgggaggccctcattgggcaaatcgcaaaggagatc
atggaggagcacacgccggcgcgcatcctgcaggtgcgcgccaagctgtacgacctgctg
acgcactgcatcccggcgacgacgatcctcaagacgctcacattcaagctcgtggccatg
attgacgacgcgctcaagcccgaggtcatcaagtggtcggcgtactacgagcacaggatc
cggatgggcaccaaggtcatcttccacctcgaggcgtttgtggccaagtttatgaggatc
atcgagatatacctgatgagcatggatctgtaa

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