Verticillium dahliae: VDAG_07060
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Entry
VDAG_07060 CDS
T03450
Name
(RefSeq) replication factor C subunit 1
KO
K10754
replication factor C subunit 1
Organism
vda
Verticillium dahliae
Pathway
vda03030
DNA replication
vda03410
Base excision repair
vda03420
Nucleotide excision repair
vda03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
vda00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
VDAG_07060
03410 Base excision repair
VDAG_07060
03420 Nucleotide excision repair
VDAG_07060
03430 Mismatch repair
VDAG_07060
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vda03032
]
VDAG_07060
03400 DNA repair and recombination proteins [BR:
vda03400
]
VDAG_07060
DNA replication proteins [BR:
vda03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
VDAG_07060
DNA repair and recombination proteins [BR:
vda03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
VDAG_07060
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC1
AAA_lid_RFC1
BRCT
AAA
Rad17
AAA_22
nSTAND3
AAA_18
AAA_16
AAA_14
NTPase_1
AAA_33
RuvB_N
AAA_28
Motif
Other DBs
NCBI-GeneID:
20708523
NCBI-ProteinID:
XP_009654260
UniProt:
G2XAF7
LinkDB
All DBs
Position
5
AA seq
1040 aa
AA seq
DB search
MPDIRSFFGPKGGAPPPKPQPAPKKADPPAKGRRGRKVVEDSDEDDVAVIEVKPKKATPK
KKAKEETSEVMISASDYFASSNSKANKAPVSPVKKVKAEVEIRTSPRNKQAASKPAAKPA
TVASPAKSRAATKKRSVTAYQAHDDDDDGDAYRDDGADENEDDIFAADTKGRGKRKNDDY
AEDESDEDILPKPKRAAARNTTSTTTATKSKPAASKKRKSPETESEPEEEKPRKKQAPAK
PRAPKAKKPAEAEDASYQAILDDIPTVRAPTPPARDPDAKFDWRTASKTGGNGAAPPLNP
GSAELPEGEDECLTGLAFVFTGVLQTIGREEAQALVKRYGGKVTGSPSSKTSYVVLGEDA
GPSKLKKIQDLGIKTIDETGLFELIRRLPAYGGGGKGAEKAREKKKQAEEKIKIDAREME
REEKARKLEAEKAAQKAAAARGSAAPVKPAAPVAQLWTSKYAPTQLSHICGNKAQVEKIQ
NWLKNWQKSRKWDFQKRGADGMGAERAIIISGPPGIGKTTAAHLAAKLEGFDVIESNASD
TRSKRLVEEGVSEVMNNTSLLGFFSGDGKKLDAGKKNIVLIMDEVDGMSAGDRGGVGALA
KYCKKTEVPLILICNERRLPKMKPFDHVAMDIQFRRPTVDQVRSRIMTICHREGLKLPPP
VVDALIEGSNKDIRQIINMISTAKLDQSAMDFDQGKAMTKAWEKHIVLKPWDICQKMLGG
GLFAPSSKATLNDKIELYFNDHEFSYLMIQENYLRCKPMALNNRGYNKREENLKALELFD
QAAESISDGDLVDRMIHGPQQQWSLMPTHAIFSTVRPASLIAGQLMGSNFTSWLGNNSKT
GKLNRFIREIHSHMRLRSSGDANEIRQQYLPVLWERMIRRLDIEGKESVSDIIDLMDSYY
LTRDDFDAMKELGVGPQDESRIKLETQTKAHFTRTYNQMSHPVPFMKSGNVQAPMKKAKD
APDLEEAIEEEDEGEAEPEEAVDEDKLDLKTDKYVKAAKKKPVKGAKAKATKKAEDENES
DAKPKKGRAKAPAAKGKAKK
NT seq
3123 nt
NT seq
+upstream
nt +downstream
nt
atgcctgacatcaggtccttcttcgggcccaaggggggtgcaccccctccgaaaccacag
cccgcacccaaaaaagccgatccaccagccaagggccgccggggccgcaaggtcgtcgag
gacagtgacgaggacgatgtagccgtgattgaggtcaagcccaagaaagctaccccgaaa
aagaaggccaaggaggaaaccagcgaggtgatgatatctgcaagcgactacttcgcatct
tccaacagcaaagcgaacaaggctcctgtttcgcctgtgaagaaggtgaaggccgaagtc
gagattcggacgagtcccaggaacaaacaggcagcgtcaaagcccgcggccaagccggca
accgtggcatcaccggccaagagtcgagcagccacgaagaagcggagcgtcacagcatac
caggcccacgatgatgacgatgacggcgatgcctaccgagacgacggcgcagacgaaaac
gaagatgatatctttgcagccgataccaaaggacgaggcaagcgcaagaacgacgactat
gccgaggatgaaagcgacgaggacattctgccgaagccgaagcgagcagctgcccggaac
accacctccacaacgacggcaaccaagagcaagcctgcggcgagtaagaagaggaagtcg
cccgagaccgagtctgagcccgaggaggagaagccccgcaagaagcaagcgcccgccaaa
ccacgcgctcctaaagcgaaaaagcctgctgaggccgaagatgcctcttaccaggccatt
cttgatgatatccccacagtcagggcgccaacccctcctgcgagagaccctgatgccaag
tttgactggaggacggcaagcaagactggaggcaacggcgctgccccgcccctgaaccct
ggaagcgccgagttgccagagggcgaggatgaatgtcttactggccttgcctttgtcttc
actggcgttcttcaaaccatcggtcgcgaagaggcacaggctcttgtcaagaggtatggc
ggcaaggtcacgggttcaccgagcagcaagacgagttacgtcgtgctcggagaagatgct
ggccctagcaaactcaagaagatacaagatctcggcatcaagacaatcgatgaaaccggt
cttttcgagctcatcagacgccttcctgcatatggaggaggcggcaaaggagcagagaag
gcacgggagaagaagaagcaggctgaggagaagatcaagatcgacgctcgagagatggaa
cgtgaagagaaggcccgaaagctcgaggctgaaaaggccgctcagaaggctgccgcagcc
cgtggctcggccgcacccgtcaagccagcagcccctgtggctcagctctggacgtcaaaa
tatgcacccacgcagctcagccatatctgtggcaacaaggcacaggttgagaagatccag
aattggctcaaaaattggcaaaagagccgcaaatgggacttccagaaacgcggtgccgac
ggcatgggtgcggaacgagccatcatcatatccggcccccccggtatcggcaagaccaca
gcagcacacctcgcagccaagctggaagggttcgacgtcatcgagagcaacgcaagcgac
accagaagcaagaggcttgtggaggaaggtgtcagcgaagtcatgaacaacacctcgcta
ctcggattcttctctggcgacggaaagaagctagatgctggcaagaagaacatcgtcctg
atcatggacgaggttgacggcatgtcggccggtgatcgcggcggtgtcggagctctggcg
aagtactgcaaaaagacagaagtgcctctgattctcatctgcaacgagcgtcgtttgccc
aagatgaagcccttcgatcatgttgccatggacattcagttccgacgaccgacagtcgac
caggttcgatctcgtatcatgaccatctgccacagggagggactaaagcttccgcctcca
gtggtcgatgcgttgatcgaaggcagcaacaaggatattcgtcaaatcatcaacatgatt
tcgacagcaaagctcgaccagtcagccatggatttcgaccaaggcaaggccatgaccaag
gcttgggagaagcatatcgtgctgaagccctgggacatctgtcagaagatgctcggaggc
ggtctcttcgcgccttcaagcaaagccacgctcaatgacaagatcgagctctacttcaac
gaccatgagttcagttacctgatgatccaggaaaactatcttcgatgtaagcccatggcg
ttgaacaacagaggctacaacaaaagggaggagaacctcaaggcgctcgagctttttgac
caagcggcagagagtatcagtgacggcgatctcgtcgatcgcatgatccatggaccgcag
caacagtggagcctcatgccaacgcatgccatcttcagtaccgtacgccccgccagtctc
atcgccggtcaactcatgggatccaacttcacctcatggctcggcaacaacagcaagaca
ggcaaactcaaccgattcatccgtgagattcattctcatatgcgactgaggtcctctggt
gacgcgaatgagattcgccagcagtaccttcccgtcctgtgggaacggatgatccgccgc
cttgatattgagggcaaggagagcgtctcggacattatcgatcttatggacagctattac
ttgactcgcgatgactttgatgcgatgaaggagttgggtgtcggaccgcaggatgagtct
cgcatcaaactcgaaacgcagacaaaggcacacttcacaaggacatacaatcaaatgtcc
catcctgttcctttcatgaaatcaggcaatgtgcaagcaccgatgaagaaggcaaaggac
gcccctgacctcgaagaagccatcgaggaggaagatgagggcgaagctgagccggaggag
gctgttgatgaggacaagctcgacctgaagacggacaagtacgtcaaagcagccaagaag
aagcctgtaaagggcgcaaaggcaaaggcaacaaagaaagcggaggacgaaaatgagagc
gatgccaagcccaagaaaggccgcgcaaaggcccctgcggcgaagggcaaggccaagaag
tga
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integrated database retrieval system
