Verticillium dahliae: VDAG_07242
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Entry
VDAG_07242 CDS
T03450
Name
(RefSeq) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
vda
Verticillium dahliae
Pathway
vda00040
Pentose and glucuronate interconversions
vda01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
vda00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
VDAG_07242
Enzymes [BR:
vda01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
VDAG_07242
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
CBM_1
NosD
Motif
Other DBs
NCBI-GeneID:
20708705
NCBI-ProteinID:
XP_009654442
UniProt:
G2XBA4
LinkDB
All DBs
Position
5
AA seq
337 aa
AA seq
DB search
MRWHWLAGPTCCVSGSSCVVQGEWYSQCTPSGGTSPPPPSAPPPASGSSACLASADGFSS
LNGGTTGGAGGTTVTVTNQSDLDKYASASGRHVIKVQGRITITPFGKEVRVSSDKTIVGI
GSTGQIYQGAFHYRVVISETSAKTPKAALPFMGEHANDYRERLRWDSVRLLENGGDGLLI
LRKDTTFFTVSNNIFRNHDKAFGIGWTENVVARGTIHHNWFDRTNQRNPSADNLAQCHLY
NNYVLGVTSYGHYARGSTNARVENVYFESCRNPLTKDSGAILNASGNIYQSCTGTVAANS
GTAFQPRDYYSCTLTATADVPSHVKANAGPRASVCPS
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atgcggtggcactggctggctggaccaacttgttgcgtcagcggcagcagttgcgttgtc
caaggtgaatggtattcgcaatgcaccccatccgggggcacctcaccacctccgccttcc
gctccaccccccgcatctgggtcatcagcatgcctggcatccgccgacggcttttcctcg
ctcaatggaggaacgactggtggtgcgggcggaacaactgtcactgtcactaaccagtcc
gaccttgataaatatgccagtgcttcaggtcggcatgtcatcaaggttcaaggccgaatc
actatcacaccatttggtaaagaggttcgggtctcaagcgacaaaaccattgtgggcatt
ggctcaacgggtcagatttatcaaggtgcgttccactatcgtgtagtcatcagtgagact
tcagctaaaacgcccaaggcggctttgccattcatgggggaacacgccaatgactacaga
gaacgactacgatgggattcagtccgtttgctggagaatggcggcgatgggttgctcatt
ctgagaaaagacacaaccttctttacagtgtccaacaacatcttccggaatcacgataag
gcttttggtattggttggacggaaaatgttgtggcgcgcggcaccatccatcacaactgg
tttgaccggacaaaccaacgcaacccaagcgccgacaaccttgctcagtgtcatctctac
aacaattatgtcttgggagttacttcatatggccactacgcccgtgggtctacaaatgct
cgggtggagaatgtctactttgagagttgccgcaatcccttgaccaaggattcaggagcg
attctgaatgcttcgggtaacatctatcagtcgtgcacgggcactgtggctgcaaactca
ggcacagcgttccagccgcgcgattactacagctgtactctcaccgcaacagccgatgta
ccttctcatgtcaaagccaatgcgggacctagggcatcagtgtgcccttcgtga
DBGET
integrated database retrieval system
