Verticillium dahliae: VDAG_07377
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Entry
VDAG_07377 CDS
T03450
Name
(RefSeq) RNA polymerase II transcription factor B subunit 2
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
vda
Verticillium dahliae
Pathway
vda03022
Basal transcription factors
vda03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
vda00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
VDAG_07377
09124 Replication and repair
03420 Nucleotide excision repair
VDAG_07377
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vda03021
]
VDAG_07377
03400 DNA repair and recombination proteins [BR:
vda03400
]
VDAG_07377
Transcription machinery [BR:
vda03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
VDAG_07377
DNA repair and recombination proteins [BR:
vda03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
VDAG_07377
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Helicase_C_3
Motif
Other DBs
NCBI-GeneID:
20708840
NCBI-ProteinID:
XP_009654577
UniProt:
G2XAZ8
LinkDB
All DBs
Position
5
AA seq
476 aa
AA seq
DB search
MSAGLTKSLQLADYLEKLPGTTFRKLYLNPSTALCISRRMLSPLAKTFVTMLLYLPGPIP
IADLEARVKPEYKRAKDHALAQLRSLHMLQMSVPTQGAPQMIQLTANFSKSYREALEGNG
APGSFGVISPHPRSPEITIESIEKHARQKWDAILHYIVNSVTPGFVDSGGPKNSVKELLL
AGQLVKRQGGSTTITQAGFTFLLQEENAQVWTLLLLWLDATDQQTAKHTDMLSFLFQLSI
LELDEVYDTEALSKERQDMLPSLMDFGLVYIPSHKPFQYFVTPQARALTNVSTATRTLTD
GMNALSQPQGGPGDQTNGIIVETNYRVYAYTTSQLQIAVLSLFCHLSVKFPGMVSGRLTR
QSVRQAIDFGITADQIISYLAAHAHEQMHRQAAADGKPVLPPTVVDQIRLWQLENERMKT
TSGFLFRDFDDDAEYRDIARFADEIGVLAWRNDRKRMFFASKHEQIRDYLKLRKKA
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgtcggctggcttgacgaagtcgctccagctggccgactacctggagaagctgcccggc
acaacgtttagaaagctgtacctgaacccctccacggcattatgcatctcaagacgcatg
ttgtcaccactagccaagacatttgtgacgatgcttctatatcttcccggaccaatacca
atagcagacctcgaggcacgcgtgaagcccgagtacaagagagccaaagatcatgctctc
gcacaactccgcagtctacacatgctacaaatgtctgttccaacacaaggcgctccgcaa
atgatacagctcacagccaacttttcgaagtcctatcgcgaggccctcgaaggcaacgga
gcaccaggctccttcggcgtgatctctccgcacccccgctcacccgaaatcacgattgag
tcgatcgagaaacacgcacgccagaaatgggacgccattttacactacattgtcaacagc
gtgacgcccggcttcgtcgacagcggcggtcctaagaactccgtcaaggagctgctcctc
gccggccagctcgtcaagcgtcaaggcggcagcaccacaatcacgcaggctggctttaca
tttctgctgcaagaagaaaacgcccaagtctggactctgctgctgttgtggctcgacgcg
accgaccagcagacggccaagcatacggatatgctctctttcctgttccagctctcgatt
ctcgagctcgacgaagtctacgacaccgaagccctcagcaaagagcgccaagacatgctt
ccgagcctcatggactttggcctagtctacataccctcccacaaacccttccagtacttt
gtcacgccccaagcacgcgccctaaccaacgtttcgacggcgacgcgcaccctgaccgat
ggcatgaacgccctgtctcaaccccagggcggaccaggcgaccagaccaacggcatcatc
gtcgagaccaactaccgggtctacgcgtacacaacgtcgcagctgcagatcgccgtcctc
tctctcttctgccacctctccgtcaagttcccaggcatggtctccggtcgtctgactcgc
cagtccgtccgccaggccatcgactttggcatcacagccgaccagatcatctcctacctc
gccgcccacgcccacgagcagatgcacagacaggccgccgccgacggcaagcccgtcctc
ccgcccaccgtcgtcgaccagatccgcctctggcagctcgagaacgagcgcatgaagacg
acgtctggcttcctcttccgcgacttcgacgacgatgccgagtacagggatatcgcgcgg
ttcgccgacgagattggcgtgctcgcgtggcggaacgatcggaagcgcatgttcttcgcg
agcaagcatgagcagattcgcgattatctcaagctgcggaagaaggcttag
DBGET
integrated database retrieval system
