Verticillium dahliae: VDAG_07596
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Entry
VDAG_07596 CDS
T03450
Name
(RefSeq) pH-response regulator protein palA/RIM20
KO
K12200
programmed cell death 6-interacting protein
Organism
vda
Verticillium dahliae
Pathway
vda03250
Viral life cycle - HIV-1
vda03272
Virion - Hepatitis viruses
vda04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
vda00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
VDAG_07596
03272 Virion - Hepatitis viruses
VDAG_07596
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
VDAG_07596
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
vda04131
]
VDAG_07596
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
vda04147
]
VDAG_07596
Membrane trafficking [BR:
vda04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT associated proteins
VDAG_07596
Exosome [BR:
vda04147
]
Exosomal proteins
Proteins found in most exosomes
VDAG_07596
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ALIX_LYPXL_bnd
BRO1
CC_CDK5RAP2
Motif
Other DBs
NCBI-GeneID:
20709059
NCBI-ProteinID:
XP_009654796
UniProt:
G2XC18
LinkDB
All DBs
Position
5
AA seq
714 aa
AA seq
DB search
MQKEVLPELRMSDPPEDMDTHTLEALIQLLLAQSQECFWKKAVMDGTYKDAIIARLAARV
SDLYSTAGDAAMKSEAISSSWIHHMSAKHHHFAGAAQYRAACDCLEKKKYGEEVARLTDA
VQCVNEGLKEARGGYVSKTIIEDLNGLKRKVEEDLKRAEKDNDLIYMDPVPPKPELKLLD
RADMAKMTVPPQVANPFDYFGDQAEFGPALFSKLVPFAVHAAITIYEQRRDRLVNQNIIQ
NLEDLTERLHTMLSSINLPGSLQALEKPLGLPPSLVQHAEEIRQADAIGRIQRAFSDIDK
LRSADIAVFDEGKSMLAAEEEEDARRRAKFGTDRWTRPDSRSDPRGAQLWAQVAEIDGYF
ASSTSSDEVVRDKFGQTQDLLELLSASDRVLMDHVPSSRRMDIAEPLKPVIGRLRGAYND
VLRLESRRRKKVEALRDKCRNDDIKPEILKEAARLERTYPTTAIAPAHFEDFFERRLDKL
YEPELEAVEKEDAEQERMMTEIERVNREFESQRKSSIGGNREREQALQRLDNAYYKYKEI
VNHLDVGRKFYNDLSKVVGQNFRDPVKVWVSERRIDAKSLEEELSMPPLGSLSMNRTPVA
SPPVSSYQAEQQQHANSYFGSNAGPAANTHAQRPHQQVHSPPAEAHVQSWAGSTVEPQQP
HPVPPVSNMWTPDMGIRFGGPAGGHGAAAPAPNPPGPRQASGGTWDPNSGIRFG
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atgcagaaagaggtccttcccgagctgcgcatgtcggacccgcccgaggacatggacaca
catacgctcgaggcgctgattcagcttcttctggcgcagagccaggagtgcttctggaaa
aaggccgtcatggacgggacgtacaaagatgccatcatcgcgaggctggcggcgcgcgtg
tcggatctctacagcacggcgggagatgcggccatgaagagcgaggcgatcagctcgtcg
tggattcaccacatgagcgctaagcatcaccactttgcaggcgcggcgcaataccgtgct
gcgtgtgattgcttggaaaagaagaagtacggcgaggaggttgcccggctgacagacgcc
gtgcaatgcgtcaacgaggggttgaaagaggcacgcggtggctatgtcagcaagacgatc
atcgaggacctcaacggactgaagaggaaagtcgaagaggacctgaagcgggcggagaag
gataacgatttgatctacatggacccggttccgcccaaaccagaattaaagctcctcgac
cgggctgacatggccaagatgacggtccccccgcaggtcgccaaccccttcgactacttt
ggtgaccaggccgagtttggtcccgcgttgttctccaagctggtccccttcgccgttcac
gccgccattaccatctacgagcagcgccgcgatcgtcttgtgaaccagaacataatccag
aacctggaggatctcacagaaaggctgcacacgatgctgagctccattaaccttccgggc
tccctacaggctcttgagaagccacttggcttgccaccaagtctggtacaacacgccgaa
gaaatccgacaagccgacgcgataggtcgaattcaacgcgcattctctgatatcgacaaa
ctgcgatcagcagacatcgccgtctttgatgagggcaagtccatgctggccgcggaggaa
gaggaggatgctcgtcgacgggccaaattcggcacagaccgatggacaaggccagacagc
cgcagcgaccctcgcggcgcgcaactctgggcccaagttgccgagattgacggctacttt
gcgagcagcaccagcagcgacgaggttgtgcgcgacaagtttggacaaacgcaagacctc
cttgagctcctctccgcatcagatcgcgttctcatggatcacgtcccttcgagccgacgc
atggacattgccgagcccctgaagccggtcataggacgactgcgcggtgcttacaacgat
gtgctgcgtctggagtctcgtcgccggaaaaaggtggaagccctgcgcgacaagtgtcga
aacgatgacatcaagccggagattctcaaggaagcggcgcgactcgaaaggacgtatccc
accacggcgattgcgcccgcgcactttgaagacttcttcgagagacgactggacaagctc
tacgagccagaactcgaagccgtcgagaaggaggacgctgagcaggaacgcatgatgacc
gagattgagcgcgtcaaccgcgaattcgagagccagcggaagagcagcatcggcggaaac
cgcgagcgggagcaagccctccagcgactcgacaatgcgtattacaagtacaaggagatt
gtcaaccacctcgatgtcgggcgcaagttctacaatgatctcagcaaagtcgtcgggcag
aacttccgggacccggtcaaagtatgggtgtcggagcggcgcatcgacgccaagagcctc
gaggaggaactcagcatgccgccgctcggctcgctcagcatgaaccgaacacccgttgct
tcgccgcccgtgtcgagctatcaggccgagcagcagcaacacgcaaactcgtactttggc
tcgaacgccggtcccgccgccaacacgcacgcgcaacgaccgcaccagcaggtccacagc
ccacccgccgaagcgcatgtgcagtcctgggcaggctctactgtcgagccgcagcaacca
cacccagtgccgcccgtgtcgaatatgtggacgccggacatgggtattcgatttggaggg
cccgccggcggacatggagcggctgcgccggccccgaatccgccgggaccaaggcaggcc
tcgggcgggacgtgggatcccaactcgggcattcgtttcggctag
DBGET
integrated database retrieval system
