Verticillium dahliae: VDAG_08006
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Entry
VDAG_08006 CDS
T03450
Name
(RefSeq) RING finger protein
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
vda
Verticillium dahliae
Brite
KEGG Orthology (KO) [BR:
vda00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
vda04131
]
VDAG_08006
04121 Ubiquitin system [BR:
vda04121
]
VDAG_08006
Enzymes [BR:
vda01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
VDAG_08006
Membrane trafficking [BR:
vda04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
VDAG_08006
Ubiquitin system [BR:
vda04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
VDAG_08006
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-rbx1
zf-C3HC4_3
zf-C3HC4
zf-RING_5
zf-RING_UBOX
zf-ANAPC11
FAR1_N
PHD_Pygo
zf-RING_Vps41
U-box_ZFPL1
Zn_ribbon_IFT122_C
zf-P11
Motif
Other DBs
NCBI-GeneID:
20709469
NCBI-ProteinID:
XP_009651067
UniProt:
G2XCX4
LinkDB
All DBs
Position
2
AA seq
679 aa
AA seq
DB search
MLANTNGKRIRFMDSCARGAKAKQQKSFISLENDPRDFHDAPSPLSSGDGPRGPRRADSD
SDPDEADIEEHLHQGPHGFNIHRSTWGNPHGDEQGGRQPPDPANGDQVIGRFLELLSTFG
HGAQGGPDFDHDHPQRPPQPFGSSPFGGSGNVRTFTTRRGNGFTSFTIATGPIHVQGGGR
ARAFGRPSEDQAQGQGHDDFQSVFSNILTGAGPPQQPHGEDMPGQGPRPRAAGAQNLAAS
LHQILNMLAPGNGQFGDAVYTQEALDRIISNMMETNPQSNAAPPASEDAIGKLQRKAVDD
EMLGPEGMAECTICIDELKKGEEVVYLPCKHWFHDTCVVMWLKEHNTCPICRTPIEERTE
SASGGQQGDGGEGSGRPAPGPSNSAPPGGGQPPPFFGFGMPSPHGDGAPPPNSTGGWGYA
APPQPPHPSTRPVHTRQFHWSFQLPQNGPAGNTRGEGSSRSPRGYDIFPPRPYDSQSSSR
QSSQRRHSMSPPATNTGSRTRQRSPTPSSWNRGHQQAGTGQAQNQTQSQGGPLSWLRNRL
SRSGPSDGPPPDGPGRDVLADLVVSQVGERVAKVKCYQDVVGSAKRSVPGPRGFPHQIKH
VAVGLEKGIEWGAPDRSAERQHNKAWQAWHQRGWTCAAATRQRHSVARCAHWPRQWRVPP
PAADEKRSSAILPSFLPPL
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atgcttgcgaacacgaatgggaaaaggatacgcttcatggactcgtgtgcccgcggtgcg
aaagcgaagcaacagaaatcgttcatttccctagagaacgaccctcgcgacttccacgat
gccccatcgcctctctcctccggcgacggtccccgtgggccccgcagggcagactccgac
tccgaccccgacgaagctgatattgaggaacacttgcaccaaggcccccatggatttaat
attcatcgatccacgtggggtaatcctcacggagatgaacaaggcgggcgccagccgcct
gatcccgccaacggggaccaggtgataggccgcttcctcgagcttctgagcacatttgga
cacggagcacaaggcgggccagactttgaccatgatcacccgcaaaggcctccccaacca
ttcggcagcagtccgtttggcggttctggaaacgtgcggacgttcactactaggcgaggg
aacggtttcacaagcttcacaatcgctaccggaccgatccatgttcaaggcggtggtcgg
gctcgagcatttggacgcccgtccgaagaccaggcgcaggggcagggtcatgatgatttt
cagtcagtcttcagcaacattctcaccggcgccggtccaccacaacagccgcatggtgaa
gacatgcccggacaaggcccacggccccgcgccgccggtgcccagaaccttgctgcgagt
ctgcatcaaatcttgaatatgttggcaccaggaaatggtcaatttggcgatgcggtctac
acgcaagaagctctcgaccggatcatttccaacatgatggagacgaatccgcagtcaaac
gccgcgccgccagcctcagaggacgccatcggcaaattgcaacgcaaggcagtggatgac
gagatgctgggccccgaaggcatggccgagtgtaccatttgcatcgatgagctgaagaag
ggtgaggaagtggtatacctgccttgcaagcactggttccatgacacgtgcgttgtgatg
tggctcaaggagcacaacacttgtcccatttgtcgaacaccgattgaggagaggaccgaa
agcgcgagcggtggtcagcaaggtgatggaggggaggggagcggcagaccggcacccgga
ccatcgaactcagcgccacccggtggtggacaacctcccccgtttttcggattcggcatg
ccaagtccccacggcgatggcgctcctccccccaacagcacaggcggctggggctatgct
gctccgccgcaaccgcctcacccgtcgacgcggcctgtacatacacggcaattccactgg
tccttccagttaccacagaatgggccagcgggcaacacgaggggcgagggcagctcccgc
agccctcggggatatgacatcttcccaccgagaccgtacgactcacagtcttcgtctcga
cagtcgtctcagaggcggcactcgatgtctccaccagcaacgaacacgggctctcgcact
aggcaacgaagcccaacaccgagcagctggaatcggggacaccagcaggcagggacaggc
caagcacagaaccagactcaatcacagggtggtccgcttagttggctgaggaatcgcctg
tccaggtctggtccgagtgacgggccgcccccggatggaccaggacgagatgtattggca
gatctggtggtgagccaggtcggagagagagtggccaaggtgaaatgctaccaagatgtg
gtggggtctgctaaacggtctgtgccaggaccccgcggtttcccccaccaaatcaagcat
gtcgccgtaggcttggaaaagggcatcgagtggggcgcacccgatcgctccgcggagcga
cagcacaacaaagcatggcaagcatggcatcagcgtgggtggacatgtgccgctgcaacg
agacaacgccattccgtggcgaggtgtgctcactggccccgtcaatggagggttccccca
ccggctgctgatgagaagaggtcgagcgccattcttccttccttcctccctcccctgtag
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integrated database retrieval system
