Verticillium dahliae: VDAG_08097
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Entry
VDAG_08097 CDS
T03450
Name
(RefSeq) polygalacturonase
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
vda
Verticillium dahliae
Pathway
vda00040
Pentose and glucuronate interconversions
vda01100
Metabolic pathways
Module
vda_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
vda00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
VDAG_08097
Enzymes [BR:
vda01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
VDAG_08097
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_hydro_28
Motif
Other DBs
NCBI-GeneID:
20709560
NCBI-ProteinID:
XP_009655769
UniProt:
G2XD65
LinkDB
All DBs
Position
6
AA seq
408 aa
AA seq
DB search
MFINLTVISVLLSSLNGLVFSEPVPLTPDRVALHPRATTCTPTAGGLSTVDDVPAIQSAI
KSCASGTILIPAGQTYHINSQLSFAGCTGCTLQLDGVLSVSTDFNYWNGKSQVISLSKIT
GATITGSGTINGNGQASWDHIITATDYVRPKLIRVEGCNNIHFSGFTVKDAPMFHIVTNG
NSKDITYSDLTLHSVSTSANVAHNTDGFDIGPASNVRVLNSQVTNDDDCVVLKPGADQVH
VEGVTCTGSHGLSVGSLAGTAGANDVVTNSIFKNCTVASSDKAAGIKFFDSSSGHGSASV
SNVTWQDIICDKCDYAFRVLTCYQSTTTADCTAHPAVANMQGIVLDGFTGTTSGHYKNNV
ANINCSPSGTCGITVKRFSVTAPSGANTVLCANTPSNLGLTCTSGASG
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atgttcataaatttgactgtcatctctgtcctcttgagcagtcttaatggcctcgtcttt
tctgagccggttcccctaacaccggatcgtgtggccctccatccccgagcaacaacgtgt
accccgacagcaggcgggttaagtactgttgacgatgtgccggccatacagtctgccatt
aagagctgcgcaagtggtacaattctgattcccgctggccaaacctatcatatcaacagt
cagctgtctttcgctggctgtactggatgtacgctgcaactagacggcgtgctatccgtg
tcgaccgacttcaattactggaacggcaaatcacaggtcatctccctatcaaagatcact
ggtgcgactatcacagggtcaggcaccatcaacggcaacggccaagcaagctgggaccac
ataatcacagcgaccgactatgttcggcccaagctcattcgggtcgagggatgcaataac
atccacttcagtgggttcacggtgaaggatgcgcccatgttccacatcgtcacgaacggc
aactcgaaagacatcacctactccgatctcactctgcactctgtaagcacctcagccaac
gtcgcccacaacactgacgggtttgacattgggcccgcatcgaacgtcagggtgctcaac
tcgcaggtcaccaacgacgatgactgcgtggttctgaagcctggagctgaccaggtgcat
gtcgaaggcgtcacctgcaccggttcccacggcctctccgtcggcagccttgccggtacc
gcgggagccaacgacgttgtcacgaacagcatcttcaagaactgcacagtcgccagctca
gataaggcggcgggcatcaagttcttcgacagttcatcgggccacggcagcgcaagtgtc
agcaacgtcacatggcaagacatcatctgcgacaagtgcgattatgccttccgcgtcctt
acctgctaccagtccaccacgacggctgactgcacagcgcatccggccgtggccaacatg
cagggtatcgttcttgacggcttcaccggtaccacgtcagggcactacaagaacaacgtg
gccaacatcaactgctctccttcgggaacgtgtggcatcacggtgaagcggttcagtgtc
acagcacccagcggtgccaacacggtgttgtgtgccaatactccgagcaaccttggactg
acctgcacatcgggggcttctggttaa
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