Verticillium dahliae: VDAG_08154
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Entry
VDAG_08154 CDS
T03450
Name
(RefSeq) pectin lyase
KO
K01732
pectin lyase [EC:
4.2.2.10
]
Organism
vda
Verticillium dahliae
Brite
KEGG Orthology (KO) [BR:
vda00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
VDAG_08154
Enzymes [BR:
vda01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.10 pectin lyase
VDAG_08154
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
20709617
NCBI-ProteinID:
XP_009655826
UniProt:
G2XDC2
LinkDB
All DBs
Position
6
AA seq
388 aa
AA seq
DB search
MTKLYALLSILAAVPVAVAQHRGTPFGFAAGTTGGGSAGPVYPQNNQQLVSYLTDSQPRV
IMIDRTFDFLQTEGSVSTRCCRLNTCSNGLQPQSYIGDTCDGGTWVSCTYWNAPKNPIDV
KSNKSIVGVGSKGIIRGKALRLRGGVSNVIIQNIHFTELNPQYVWGGDAITLDGADRVWI
DHNKFSLVGRQMIVSGWGAAGKVTISDNEFDGRTSWSVSCNNKHYWALLLIGANDFYTFA
GNWLHDLSGRSPHLGTGGTSSNVVHVVNNYFQNIDGHALDIQGNAWSLLEGNYFENVKEP
VSAGSGSDGAKIYDIRQVADAANAQSALGYIPEWNRNAGSSGVPKVRLDQAALQKLGQHK
SAITWSHWKVENVPTNVKNNAGVGKIRN
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atgacgaaactctacgctcttctctccatcctggcggcggtgcccgtggcggtagcccaa
catcgaggcacccccttcggcttcgccgctggcaccacgggcggtggtagtgcgggacca
gtctacccccaaaacaaccaacaactcgtcagctacctaactgacagccaaccccgtgtc
atcatgatcgaccgcacttttgacttcctccagacagaagggagcgtgagcacgcgctgt
tgccgcctgaacacttgcagcaacggcttacagcctcagtcctacattggcgatacatgc
gacggcggtacctgggtctcctgcacttactggaacgcccccaagaatcctattgatgtc
aagagcaacaagtccatcgtcggtgtaggcagcaaaggcatcattcgcggcaaggcactc
cgtctgcgcggcggtgtgagcaacgtcatcatccagaacatccacttcactgagctcaac
cctcagtacgtttggggtggtgatgctattaccctcgatggagctgaccgcgtctggatc
gaccacaacaagttctctctggtcggtcgccagatgattgtttctggttggggcgccgcc
ggcaaggtgacgatttccgacaacgagtttgatggcaggacgtcatggtctgtttcttgc
aacaacaagcactactgggccttgctgttgatcggcgcgaacgacttttatacctttgct
ggcaactggttgcacgacctgtcaggccgttcaccccacctgggcaccggtggcacctca
tcaaacgttgtccacgtcgtgaacaactatttccagaatatcgatggccacgcccttgac
atccagggcaacgcttggagtctacttgagggcaactacttcgaaaacgtcaaggagcct
gtctctgcgggcagtggcagtgacggcgctaagatctacgatattcgccaggtagcggac
gctgccaacgcacagagcgcgctcggctacatccctgaatggaaccgaaacgctgggagc
agtggcgtgcccaaggtgcgcctcgaccaggcagccctacagaagctcggtcagcacaag
agcgccatcacatggtcccactggaaggtagagaacgtgcctaccaacgtgaagaacaac
gccggcgttggaaagattcgcaattaa
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