Verticillium dahliae: VDAG_08371
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Entry
VDAG_08371 CDS
T03450
Name
(RefSeq) ATP-dependent RNA helicase DHX8
KO
K14780
ATP-dependent RNA helicase DHX37/DHR1 [EC:
5.6.2.6
]
Organism
vda
Verticillium dahliae
Brite
KEGG Orthology (KO) [BR:
vda00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vda03009
]
VDAG_08371
Enzymes [BR:
vda01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
VDAG_08371
Ribosome biogenesis [BR:
vda03009
]
Eukaryotic type
90S particles
Helicases
VDAG_08371
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HA2_C
Helicase_C
OB_NTP_bind
HA2_N
DEAD
Motif
Other DBs
NCBI-GeneID:
20709834
NCBI-ProteinID:
XP_009658391
UniProt:
G2XDY9
LinkDB
All DBs
Position
Unknown
AA seq
1191 aa
AA seq
DB search
MAKFVPRQRKHKVLAREKAKENAVAPLDADTNAEQIDPEERRLMREKKERMKKELQGDVK
VSGKKAKRLDKYIENKLRKDENREILAKLSQSKIDTNLFTSSKTIGQGKETKRQAISRAM
RERKAGVEVDEDGDELLFERPRQQDSSSDEDSEDDEPAPAPAPIPAQKPASPPTEAPTAI
SAPQPSAAAAGSGLKRPLDLDEAGRPVLRKRQRRGGVQSKFTIAEPAKGDLEEEWSGFSS
EDEGVGGAKLGSADTEEDASESGSGDDSDEDDDEEEDGESASDEDDSDMDSDDSSSEAKP
SAFKAWAPAQRNEALGFKPASESTQILDVPRPDNFTPRAAEHEPLPEELQPSVNLARKAF
GVTVTRTPEIQEARLKLPVVGEGAEDYGGHSQPRHHRRVRFHRFGKDDASYGSPDSPTSG
MIGVTQPRRVAAVSMSKRVAEEMGDHAERVAYQIRFEGTTSAKTAIKFMTDGVLLREIAQ
DFSLKKYSAVIIDEAHERSVNTDILIGMLSRINNVRQEDQNGSSPLKPLKIIIMSATLRV
EDMTQNSQLFATPPPVVEVEGRQHPVTIHFARRTRPDYVDELYNKISRGHKKLPPGGFLV
FLTGQNEIVQLSKRLEAAFGGLTSASGPKVQISASEAPMEVEDIEFGDVDDFDAGELDDE
ISEGEGDEDEDEEFKIEEEGETGPLKMQVLPLYSLLPTREQMRVFKEPPEGTRQVILATN
VAETSLTIPGTRYVFDCGRSKERQYDEVSGVQTYAIGWVSKASANQRSGRAGRTGPGHCY
RLYSSAVYERDLPQFSEPELLRMPIDGVVLQLKSMNLSNVVNFPFPTPPDRASLRKAERL
LHYLSAISAEGQVTRIGSTMSIFPLSPRFARILLVGHQHDCLQYTIALVAALSAAEVFIP
ENQAIPSLEATEDHVLRTNAVVAAEDRQATIRRAFNGVQRNFCSLDDKSDAIKLLQVVGE
YAHEPTEAWCESHFVRYKVLKEIQQLRQQIVELLRTNVPSFQNLRFQDRLDRPTDRQVAY
LKQMVAAGFIDQVAIRADKSPTPPENARKPRRAIDVPYLPLVPLGVGADVDKFVYLHPSS
PLAHMSPQELPEYVVYAYLQRATQGVDPTKTPKTRMHALTDVTGGQLAGLAKGTPLLTYG
KPVKEVRATAMEREVWVVPYLRAEGVGGSGWPLPMKKVIEKREVGKGWVVQ
NT seq
3576 nt
NT seq
+upstream
nt +downstream
nt
atggccaagttcgtcccgcggcagcgcaagcacaaggtgctggcccgcgaaaaggccaag
gagaacgccgtcgccccgctcgacgccgacaccaacgccgagcagatcgaccccgaggag
aggcggctcatgcgcgagaagaaggagcgcatgaaaaaggagctgcagggcgacgtcaag
gtcagcggcaaaaaggccaagcgtctcgacaagtacatcgagaacaagctgcgcaaggac
gagaaccgcgagatcctcgccaagctgtcgcagagcaagattgacacgaacctgttcacc
agctccaagaccatcggccagggcaaggagacgaagaggcaggccatcagccgtgccatg
agggagaggaaggccggtgtcgaagtggacgaggacggcgacgagcttttgttcgagagg
ccgcggcagcaggactcttcgtctgatgaggacagtgaggatgacgagccggcaccagcg
ccggcaccgataccggctcaaaagcccgcttcaccgcccaccgaggctcccacagcaatc
agtgcgccccaaccttctgcggcagctgccggctctggtctgaagaggcccctcgatctg
gacgaggcaggcaggccggtgctgcgcaagcgtcaacggcgcggaggtgtccagtccaag
ttcaccattgccgagccagcaaagggcgacctagaggaggaatggagcggtttcagctcc
gaagacgaaggcgtgggaggtgccaagcttggctctgccgacaccgaagaggatgcttcc
gagtctggatccggggacgactctgatgaagatgatgacgaagaagaagacggcgagagc
gcctccgatgaggacgacagcgacatggacagcgatgacagcagctccgaggcgaaaccc
tcggctttcaaggcatgggcgccggcacagaggaacgaggctctgggcttcaagccggcg
agcgagtcgacgcaaatactcgacgttccccggccagacaatttcaccccacgcgctgcc
gagcacgagccgctgccagaggagcttcagccctcggtcaacctcgcccgcaaggccttt
ggcgtgaccgtgacaagaacgcccgagattcaggaagctcgtctcaaacttcccgtcgtg
ggcgagggagcagaggattatggaggccattcacaaccacgacatcatcgtcgtgtgcgg
ttccaccggttcgggaaagacgacgcaagctacggctcgcccgactccccgacgtcgggc
atgattggtgtgacgcagccgcgtcgagtagccgccgttagcatgtcaaaacgtgtggcc
gaggagatgggcgatcacgctgagcgcgtcgcctaccagattcgcttcgagggtacgacg
agcgccaagacggccatcaagttcatgacggacggtgtgttgctccgagagattgcgcag
gatttctcgttgaagaagtactcggccgtcatcatcgatgaggcgcacgaaaggagcgtc
aacacggacatcctcattggcatgctcagccgcatcaacaacgtccgccaggaggaccag
aatggttcatcgccactgaagcctctcaagatcatcatcatgtcggctaccctcagggtc
gaggacatgacgcaaaactcccagctattcgcaacgccgccgccggtcgtcgaggtcgag
ggtagacagcaccctgtcacaatccacttcgcccgcaggacacgacccgactacgttgat
gaactgtacaacaagatcagccggggtcacaagaagctgcctcctggaggtttcctcgtg
ttcttgacgggccagaatgagatcgtgcagctcagcaagaggttggaggcagcttttggc
ggtctgacctcggcgagcggccccaaggtgcagatctccgcgagcgaagcgccgatggag
gttgaggatattgaatttggtgacgttgacgactttgacgctggagagcttgacgatgag
atttcagaaggcgagggcgacgaggacgaagacgaagagttcaagattgaggaggagggt
gagacgggccccttgaagatgcaggtgctgccactctactctctcctgccaacgcgcgaa
cagatgcgtgtctttaaggagccgccagagggcacgcgacaggtcattctcgcaaccaac
gttgcggagacgagtcttacgatccccggaacgagatacgtcttcgattgtggccggtcc
aaggaacgccagtacgacgaggtcagcggtgtccagacgtacgccatcggatgggtcagc
aaagccagcgccaaccagcgatctggtcgtgctggtcgtacgggccccggtcactgctac
cgcctgtactcgtcggcagtgtatgagagggatttgcctcagttctccgagcctgagctc
ttgcgcatgcccattgatggcgtcgtgctgcagctcaagtccatgaacctctccaacgta
gtcaactttcccttcccgacgccccctgaccgagcaagcctccgcaaggcagagaggctc
ctccactacctgtcagccatctctgccgagggccaggtgacgcgcatcggctcgaccatg
tccatcttcccgctatcgccgcgcttcgcccgcatcctcctcgtcggccaccagcacgac
tgtctccagtacaccatcgcgctcgtggcagcgctgtcggcggccgaggtcttcatcccc
gagaaccaggcgatcccctcactcgaggcaacagaagaccacgtgctgcgcaccaacgcc
gtcgtcgcggccgaggaccgccaggccacgatccggcgcgcgttcaacggcgtgcagcga
aacttttgctcgctcgacgacaagtcggacgccatcaagctgctgcaggtggtcggcgag
tacgcgcacgagccgaccgaggcgtggtgcgagagccactttgtgcggtacaaggtgctc
aaggagatccagcagctgcgccagcagattgtcgagctgctgcgcaccaacgtgccgtcg
ttccagaacctgcggttccaggaccgcctcgaccgccccacggacaggcaggtcgcctac
ctcaagcagatggtggccgccggcttcatcgaccaggtggccatccgcgccgacaagtcg
cccacgccgccggagaacgcgcgcaagccccgccgcgccatcgacgtgccgtacctgccg
ctcgtgccgcttggcgtcggcgccgacgttgacaagtttgtctacctccacccgtcctcg
cccctggcgcacatgagcccccaggagctgcccgagtacgtcgtctacgcgtacctgcag
cgcgcgacgcagggggtcgacccgaccaagacgcccaagacgcggatgcatgcccttacg
gatgtgacgggcggccagctcgccgggctggccaagggcacgccgctgctgacgtacggc
aagccggtcaaggaggtcagggccacggccatggagagggaggtctgggtcgtgccgtac
ctcagggccgagggcgtcgggggcagcggctggcctctgccgatgaagaaggtgattgag
aagcgggaggttggcaaaggctgggtggtgcagtag
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