Verticillium dahliae: VDAG_08402
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Entry
VDAG_08402 CDS
T03450
Name
(RefSeq) COPII coat assembly protein SEC16
KO
K20353
COPII coat assembly protein SEC16
Organism
vda
Verticillium dahliae
Brite
KEGG Orthology (KO) [BR:
vda00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
vda04131
]
VDAG_08402
Membrane trafficking [BR:
vda04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
VDAG_08402
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_Sec16
Sec16
Nup96
IHABP4_N
Motif
Other DBs
NCBI-GeneID:
20709865
NCBI-ProteinID:
XP_009658422
UniProt:
G2XE20
LinkDB
All DBs
Position
Unknown
AA seq
1989 aa
AA seq
DB search
MSSDEHVSSWHPALMPNSSASATADGHPSAPAHTQPPPAQDSLEASKPYAQDRTTSSTDS
PAHPEATADLDASLINEPTEPTPTSEATMPSIPDTIPQDESANRPWFAEEPVAKDDAEED
WPVFDHPTSAPAEPDALPADAETAAPTEASPPAPEVQAAGPVLGHSSTVSFARTVSHDIN
FHDDEEADWNLSRTDTDPFKFMPPSDRTNSFPVVPPASPPGASTETRPLPATEAQHVIQA
TEQHQDGFDAPLSERAISPAQPHFADDPSEPPHINGFSEQAQYVGRDMTGADEDNVGSRF
EEGLPLIPRAPEHTDTAASASFFDNEASADDDFFSNVQDAGHDDTPPTLERKSTMQVLGA
FGTNPLSRADTLEEMAEEDEHQATPSQALATEDDASKPATEDLAAKWQEAFAGDDDDEFL
LDDNTGDSKPVDPAAFFGSDDEGFLDDDDDETTAPAPAVQPPSLPAAQQQSLQGRYTPQS
PSFPFPKAAATQSPYVPVAAAPPQTPTSAYAPSPVVTSFPAPTSYAAQSQPSPSQAAYGM
PPPPRPEASKAQSFADKNKGGYTSPYDLPMDVKPRKRASMQQLPRAQVQGPSAQLPPRSS
SMYAPSPTSSAPPSAGLPPPSPASALPSPGTAGPAAGPKPRAVTPSKENFFEDLPMTSRP
RPASRQSSRLPSPALGGPASLPQGPPPGPAPGPPPAQYAPLPPSQSMELPKQEAPPAPPR
AESSGLTGLVAPPRVSPYAALQSTSPGTSSIPNNSRYSPAPPLAPAVNGTARPGSANRYS
PAPPASRPPSATYSAAPPPAAVLPHLPRTSSPLAHFEVSHDRAQSAPVTNGEHGQHGQLG
QLGQQDRRISAQFEPRVNRVSSLPPTQEVEEDEGARVEQSPQPIDAYTSLGATPASPPLA
RHTPPPSAHGYGPSMLSPPKRAAANYTPQPQSNPLSPEQRFAPPMRSQTQSPGSLQNRYQ
PSEAAARPASSHGAAPPQAAQPASAQHSYAAAPRTGRHRAPSQSLNMVAPTDGRENDPLK
RWKGAPVFSWGIGGTIITSFPKEIPRYGMGQTAPMIVRTPGEVRVKQVKDIEPLEDRLAK
FPGPLKGKSKKKETISWLTAGIESLEANLPGQTYSSQITHEDKRMTERVLLWKILRTFIE
FDGALEGGAEVEAAVRNILSPEAKKDEAAEAAPLYADGAAGVAFPATSTQMQADGVDPQT
VVSIRKHLLAGDREQAVWAAVDKRLWGHAMLISNTVSPDLYKQVAQEFVRKEVNHPGHNN
ESIAALYKVLSGNFDECVDELVPSHARAGRQLMTTAATAEPAKDALDGLDKWRETLGLVL
SNRSPDDTRALSALGDLLSTYGRAEAAHICFLFARKTIVFGGLDDQTASFVLLGADHKTQ
AEQFGKETEALLLSEVFEYGLSLANGANSAGVPHLAAYKLQHAATLAEHGFRDKALQYCD
VIANSITAQTKRSPYHHPLLEAAVDDLSKRLKQAPKGESSSWISKPSMNKVSDSMWNRFN
KFVAGDEADGSGTATPGEPGAETGPFGRIAGGTPTISPSPSVSNFDVYGNNNPGYPVTAP
VALAQGTRAASRYAPMGAQPSPPTTSYEPTSGYTPAAQSTQPSNDYGRASFDAPTRTSID
SQSGVAAGSYTPQAYNPAPYGAPQDVHTPQPDPAPSAYGPYGGLREAPVITHQGSPAPPA
DEPTQFTPQQDQGYQPPSYGYEPPSFGTNAGPESQQAEPEDAAASGGYEAPSYQPYSYEP
PTYDPGVEPSNDDNDDDDKPKPKKKSFMDDDEDDIPALRPQGKSKSEKDKENDEMFRKAA
EEDAKRAAEQSAGKKGWGFGSWWGGKKDAMPDSNQGNKPIRAKLGESSSFVYDPDQKRWV
NKKAGAEQTPAKTATPPPPKSTGTPPPPSSSAPPMGPPGGPPRPPMPIGAGSLSKAPSRE
SLDIPAGPPAMARSVSNSSTGPPSGPPSRPTTSMSNASSIDDLIGAAGPRRPGAKKARKS
GRYVDIMAK
NT seq
5970 nt
NT seq
+upstream
nt +downstream
nt
atgagctccgacgaacacgtctcatcatggcatcccgctctgatgcctaacagcagtgcc
tctgccactgccgacggccatccctccgctcctgcacacacccaaccaccaccggcccaa
gattctctggaggcatccaagccttacgcgcaagacagaaccacatcatccacagactcg
cccgcgcatcccgaggcaaccgccgatcttgatgcgtcgctgatcaacgaaccaaccgaa
cccacgcccacttccgaagctaccatgccttcgatccccgacacgataccccaggacgag
agcgccaacaggccctggttcgcagaggaacccgttgcgaaagatgatgctgaagaggac
tggcccgtgtttgaccatccgacctctgctcctgcagagcccgatgcgctaccggccgac
gccgagactgcggcgcctacggaagcatcacccccagcacccgaggtgcaagccgccggc
cctgttctcggtcactcgagcactgtttccttcgcccgaactgtgtcgcatgacatcaac
ttccacgatgacgaggaagccgactggaacctctcccgaaccgacacggaccccttcaag
ttcatgccgccctctgacaggacaaactcgttcccggtcgttcccccagcgagcccgccc
ggcgcgtcgacggagacccgaccgcttcccgccaccgaggcccaacatgtaatccaggcg
acggagcagcatcaggacggctttgacgctcctctgtccgaacgagcaatctctccagcc
caacctcacttcgccgacgacccgtctgaaccgcctcatatcaatgggttctcggagcaa
gcgcagtatgtaggacgcgacatgacgggcgccgatgaggacaatgtcggttcgcgattc
gaggaaggtctgcctctcatccctcgcgcgcccgagcacacggatactgccgcctcagcc
tccttcttcgacaacgaagcctcggccgacgacgactttttcagcaatgtccaggatgca
ggtcacgatgatacgccgcccacgctggagcgcaagtcaacgatgcaggtactcggtgcc
tttggcacgaacccactgtcgcgagccgatacgctggaggagatggccgaggaggatgag
catcaagcgacgccgtcgcaggccttggctacagaggacgacgccagcaagcccgctacc
gaggatctggctgccaaatggcaagaggcatttgccggggacgatgatgacgaattcctg
ctcgacgataacactggcgactcgaagccagttgatcccgccgcattctttggcagtgac
gacgaaggcttcttggacgacgatgacgacgagaccacggcacccgcgccggctgtgcag
ccacccagtctgccagccgcccaacagcaaagcctgcaaggacgatatacgccgcagagc
ccatctttcccgttccccaaggctgccgctacccagtcgccttatgttcctgtggcggcg
gcgccgccccagacgccaacatcagcatatgcgccttcgcctgtggtcacttcattccca
gccccaacgtcgtacgccgctcagtcccagccctcgcccagccaagctgcatatggcatg
ccgccgcccccgcgtcccgaggcttccaaagcccagagcttcgccgacaagaacaagggc
ggctacacctcgccctacgacttgcccatggatgtcaagccgcgcaagcgagccagtatg
caacagctgccgagagctcaggtgcaaggcccctccgcgcagctaccgcccagaagctcc
agcatgtacgctccaagcccgaccagctccgcaccaccgtctgccggcttgcctcctccc
agccctgcctcggctcttcccagcccaggcacggcgggaccagctgctgggccgaagcct
cgagctgtcactccgagcaaggagaactttttcgaggaccttcccatgacctccagaccc
cgtccggcctcgcgccagagcagccgcctgccgtctccagctcttggcggtcctgcttcc
ctgccgcagggaccgcctcctggaccggctccggggccgcctccagcgcagtacgcgcct
ctgccaccgagtcagtccatggagctaccgaagcaggaggcccctccggctccgcctaga
gctgagtccagcgggctcaccggactggtcgcgccgccgcgcgtgagtccgtatgcagcc
ttgcagtccaccagcccgggcacgtcgagcatacccaacaacagtcgctattctccagcg
ccgcctttggcgccggctgtgaatggcacagctcggcccggttcggccaacaggtactcg
ccggccccgccagcctcccgaccaccttcggcgacgtatagcgcggcgccgcccccagcc
gccgtgctccctcacctgcctcgcacttccagcccgctcgcgcacttcgaggtttctcac
gaccgagcccagtctgcacctgtcacaaatggtgagcacggccagcacggccagctcggc
cagctcggccagcaggatcgacgcatcagcgctcaatttgagccgagggtcaaccgcgtg
tcgtcgctgccgccgacgcaggaggttgaggaagacgaaggtgctagggtcgaacagtcg
cctcagcctattgatgcgtatacctctcttggcgcgactcctgcatcaccacctcttgca
cgccacaccccaccgccgtccgcccatgggtatggcccatccatgttgtcgccgcccaag
agagctgcggccaactacacgcctcagccgcaatcgaaccccctctcacccgagcagagg
ttcgcgcccccgatgaggtcgcagacacaatcgcctggctcactccaaaaccgctaccaa
cccagtgaagctgctgcacgtccggcgtcctcgcatggcgccgctcctccgcaagcagcg
cagcccgccagtgctcagcactcctatgccgcagcacctcgcacgggtcgccaccgagct
ccttctcagagcttgaacatggtcgcccctaccgatggacgtgagaatgaccccctcaag
aggtggaagggagcacctgtcttctcgtggggtattggtggcaccatcatcacatctttc
cccaaggagatcccacgctacggtatgggccaaacggcacccatgattgtgcgtacgccc
ggcgaagttcgcgtcaagcaggtcaaggacattgagcctctcgaagatcggctggccaaa
ttccccgggcctctcaagggcaaatcgaagaagaaggagaccatttcctggctgacggcc
ggaatcgagtcactggaggcaaacttgccaggtcagacgtacagctctcaaatcacccac
gaagacaagcgaatgactgagcgcgtcctgctgtggaagattctcaggacgttcatcgaa
ttcgatggcgctctcgaaggcggtgcagaggtcgaggccgccgtgcgcaacattctctcg
ccagaagcaaaaaaggatgaggcagcagaggcagctcctctttacgcggatggcgcagct
ggtgttgcgttcccagccacttccacgcagatgcaggcagacggtgttgacccccaaaca
gtcgtctccatccgcaagcacctcctcgctggtgatcgggaacaagcggtctgggcagcc
gtcgacaagaggctctggggtcatgccatgctcatctcgaacacggtgtcgccggatctg
tacaagcaggtcgcccaagagtttgtgcgcaaagaggtcaaccacccggggcataacaat
gagtcgattgctgcactttacaaggtcctgtcaggcaatttcgatgagtgtgtcgatgag
ctggttcccagtcatgctcgtgctggccgccagctgatgaccacggccgcgacggccgag
ccagccaaggacgcccttgatggcctcgacaaatggcgcgagaccctggggttggtgctc
agcaaccgaagcccggacgacaccagggcgctgagcgcactgggtgatctcttgtcgaca
tatggcagagccgaagccgcacacatttgcttcctctttgcccgcaagacgatagtattt
gggggtctcgacgaccagacagccagctttgtcctcctgggtgctgaccacaagactcaa
gccgaacagttcggcaaggagacagaggcactgttgctcagcgaagtcttcgagtatggc
ctttcgcttgcgaacggggccaactcggccggcgtgccgcacctcgcagcctataagctc
cagcatgccgcaactctggcagagcatggcttcagggacaaggcgctgcaatactgcgat
gtcattgccaactcgatcactgcacagacaaagaggtctccgtaccatcatcccctgctc
gaggctgcggtagatgacctgtccaagaggctcaagcaggcgcccaagggcgagtcttcg
tcctggatctccaaacccagcatgaacaaggtctcggacagcatgtggaatcgctttaac
aaatttgttgccggcgacgaggccgacggctctggcaccgccacgcccggcgagcctggc
gcggagactgggcccttcggccgcattgccggaggcacccctaccatcagcccgtctcct
tccgtttcgaactttgacgtgtacgggaacaacaatcccggctacccagtcactgctcct
gtagcactggcacaggggacaagagcagcatcgcgctatgcacccatgggagcgcagccg
tctccaccgacgacttcgtatgagccgacgtcgggttatacgcctgcggcgcagtcgact
cagccgtcgaacgactatggccgtgcgtcctttgatgcgccgacccgcacctctatcgac
tcgcagtctggtgttgccgcgggcagctatacaccgcaagcctacaaccctgcaccctac
ggtgcgccccaggacgtccatacaccccagcctgaccccgctccgtctgcctatggtccg
tacggcggcttgcgagaagctcccgtcatcacgcaccagggatcgccagcgccacctgcc
gatgagcccacccaattcactcctcagcaggatcaggggtaccagccgccctcgtacggc
tatgaacctccgtcatttggcacgaacgcaggcccggaatcccaacaggccgagcccgag
gatgctgcagctagcggaggatacgaagcaccttcgtaccagccctacagctacgagcca
ccgacctatgacccgggcgttgagccatccaacgacgacaatgacgatgatgacaagccg
aagccaaagaagaagagcttcatggatgacgacgaggatgatattcccgcgctgcggccg
caggggaaatccaagtcggagaaggataaggagaatgacgagatgttcaggaaggccgcc
gaagaagatgccaagagagcagccgaacagagcgcaggcaagaagggatggggcttcggc
agttggtggggtggcaagaaggacgccatgccggattccaaccaaggcaacaagccgatc
cgtgccaagttgggcgagtcgagcagcttcgtctacgaccccgatcagaagcgatgggtc
aacaagaaggccggggccgagcagacaccggccaagacggctacacctccaccgcccaag
tcgaccggcacgcccccgcctccctcgtcatcggcgccgcccatgggaccccctggcgga
ccccctcggccgcctatgcccatcggcgcaggcagcctgtcaaaggctccttcgcgcgag
agcctcgacattccggccggcccgccagccatggcgcggtcggtgtcgaactctagcaca
gggccaccgagcggaccgccgagccggccgacgacgagcatgagcaatgccagcagcatt
gatgatctgataggcgctgcaggaccgcgtaggcctggcgcgaagaaggcgaggaagagc
ggacgctatgtggacattatggcgaaatga
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integrated database retrieval system
