KEGG   Verticillium dahliae: VDAG_08454
Entry
VDAG_08454        CDS       T03450                                 
Name
(RefSeq) splicing factor 3B subunit 4
  KO
K12831  splicing factor 3B subunit 4
Organism
vda  Verticillium dahliae
Pathway
vda03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:vda00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    VDAG_08454
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:vda03041]
    VDAG_08454
Spliceosome [BR:vda03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    VDAG_08454
 Complex B
    VDAG_08454
 Complex C
   U2 SnRNP specific factors
    VDAG_08454
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_5
Other DBs
NCBI-GeneID: 20709917
NCBI-ProteinID: XP_009658474
UniProt: G2XE72
LinkDB
Position
Unknown
AA seq 498 aa
MAQNRHWEQDKDATVYIGNIDERATSTMVYEIMLQMGPIHNIHMPRDRVTQTHQGFGFVE
FRTPGDAEYAANVMNGVKLYGKSLRVNKASADKQKQAEVGAELFVGNLDPMVDEKILYDT
FSRFGPLLTLPKVAREDSGNSKGFGFISFADFESSDAAVENLHGQYLLSKEVSVQYAFKK
DGKGERHGDAAERELAAQAKKRNIVPEMQPVPAAFLNQPQPPPAVAPGAPPVPAGFDPAN
GLPMHHQHHQHQHQQQQHPQMAQPGIPPGFGAPPPRFPRLQRRARRPRDPGAPWRRIRPA
LSAISKGDMPLPPASPPARPPARPATRTRPTSTPAAPRATLGRPPADPRPRLALAPCRRR
TASPRRAARLLRRRGSCRHRGSSRLAFPAGEPTNGRLREGKGQRNFPSPQKVTSNAALHV
PRANEAIGRRTRWLPLMRSGEAMVAALAKSWTQWSVCPHLSSGTEPPLTESRYPCLEFGV
RGTEKEQPSGRNSLKPAT
NT seq 1497 nt   +upstreamnt  +downstreamnt
atggcgcaaaatcgacactgggagcaggacaaggatgcgaccgtctacatcggcaacatc
gacgagcgcgcgacttcgaccatggtctacgagatcatgctccagatgggccccatccac
aacattcacatgccccgcgaccgtgtcacacaaacccaccagggcttcggcttcgtcgag
ttccgcacccccggcgacgcagagtacgcagccaacgtcatgaacggcgtcaaactgtac
ggcaaatccctgcgcgtcaacaaggcgagcgcagacaagcagaagcaggccgaggtcggc
gccgagctcttcgtcggcaacctcgaccccatggtcgacgagaagatcctctacgacacc
ttctctcgcttcggccccctcctcacgctgcccaaggtcgcccgcgaggacagcggcaac
tccaagggcttcggcttcatctcctttgccgactttgagagctccgacgccgccgtcgag
aacctccacggccagtacctcctcagcaaggaggtgtcggtccagtacgccttcaagaag
gacggcaagggcgagcgccacggcgacgccgccgagcgtgaactcgccgcccaggccaag
aagcgcaacattgtccccgagatgcagcccgtccccgccgccttcctcaaccagccccag
ccgccgccggccgtcgcccccggcgccccccccgtccccgcaggcttcgaccccgccaac
ggcctgccgatgcaccaccagcaccaccagcaccagcaccagcaacagcagcacccccag
atggcccagcccggcatcccccccgggtttggggccccgcccccgcggtttccccgctta
caacgccgtgcccgccgcccacgcgaccctggcgctccctggcgtagaatcaggccagcc
ctatcggccatcagcaaaggggacatgccgcttcctccggcctccccgcccgcccgcccg
ccagccaggccggctacacgaacccggccgacttccaccccggcagcgccccgggcaact
ttaggccggcccccggcggacccccgcccccgcctggctttggcaccgtgccgccgccgc
acggcttccccgcgccgagcggcacgcctcctgcgccgccggggttcctgccgccaccgg
ggttccagccgcctggctttccccgcaggtgagccgacgaacggcaggttgcgagaagga
aaagggcagaggaactttccctcccctcaaaaagtaactagtaatgcggccctccatgtg
ccaagggcgaatgaggccatcggccgtcgaaccaggtggctccctttgatgaggagtggg
gaggccatggtcgctgcgcttgccaagagttggacacaatggtctgtctgtccgcacctc
tcgtcggggactgagccgcctctaacagagagtagatacccatgcttggagtttggcgta
cgtgggactgaaaaggagcagccgtcgggccgtaacagtctgaaacctgcgacttga

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