Verticillium dahliae: VDAG_08533
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Entry
VDAG_08533 CDS
T03450
Name
(RefSeq) pre-mRNA-processing protein
KO
K06063
SNW domain-containing protein 1
Organism
vda
Verticillium dahliae
Pathway
vda03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
vda00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
VDAG_08533
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
vda03041
]
VDAG_08533
Spliceosome [BR:
vda03041
]
Complex B
Other components
Prp19-related factors
VDAG_08533
Complex C
VDAG_08533
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SKIP_SNW
Transformer
Motif
Other DBs
NCBI-GeneID:
20709996
NCBI-ProteinID:
XP_009651137
UniProt:
G2XEE8
LinkDB
All DBs
Position
2
AA seq
536 aa
AA seq
DB search
MASISAALASALPTPKYAGEDDAPAHAQQRGPRIVGAGHLDQTQVVLRVSHPPPRKTTLV
QHADVSPQRTGPPPYGQRTGWRPSGQEDFGDGGAFPEVPVAQYPLSMGQKSATASNALAV
QVDAEGKVDYGAIARQGHNDSRIIHALTSRAPAATRVAATTEKTKNALAALVSGAVAAQK
PKNINVGNRADPTFVRYTPANQMGDNSKKQDRIMKIVERQRDPLEPPKFKHKKIPRGPPS
PPPPVMHSPPRKATAEDQENWRIPPPISNWKNPKGFTIALDKRLAADGRGMQDVTVNDKF
AQFSEALHMADRHAREEVRQRAQMQQRLAEKEKEQKEENLRMLAQQAREERAGAGQRDSR
SRSRSRSYSGSDSGSDSEEAEVRERERARKDKMREEERKLRQSRMGAERRVQVMAREQNR
DISEKIALGLAKPTQSKETMYDSRLFNQSSGFDSGFNEDNPYDKPLFAAQDAISSIYRPK
ANMDDDEDEAAGDKEMAKIQKASRFGEALGRGTFKGAEEAEGDAISSIQPSQHKVE
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atggcatccatatcggccgctctcgcctcagcgctcccgacaccaaagtacgccggcgag
gatgacgcccctgcacacgcccagcagcgcggcccgcgcatcgtcggtgcaggacacctc
gaccagacccaggtcgtgctgagggtcagccaccccccgccgaggaagaccacgctcgtg
cagcatgctgacgtctcaccacagagaacaggaccacccccctatggccagcggacggga
tggcggccgagcggccaggaggattttggcgacggcggcgcgttccccgaggtgcctgtc
gcccagtaccctctgtcgatgggccaaaagtcggcgacggcaagcaacgccctcgccgtc
caggtcgacgccgaaggcaaggtcgactacggcgccattgcccgccagggccacaatgac
agccgcatcatccacgcattgacctcgcgcgccccagccgcgacgagggtcgccgcgacg
accgagaagacgaagaacgccctcgccgccctcgtcagcggcgccgtcgccgcccagaag
cccaagaacatcaacgtcggcaaccgcgccgacccgacctttgtgcgctacacgccggcc
aaccagatgggcgacaactcgaagaagcaggaccgcatcatgaagattgtcgagcgccag
cgcgaccccctcgagccccccaagttcaagcacaagaagatcccccgcggcccgccgagc
ccgccgccccccgtcatgcactcgcccccgcgcaaggccacggccgaggaccaggagaac
tggaggatcccgccgcccatctccaactggaagaaccccaagggcttcaccattgccctc
gacaagcgcctcgccgccgacggccgcggcatgcaggacgtcaccgtcaacgacaagttt
gctcagttctccgaggccctgcacatggccgaccgccacgcccgcgaggaggtcaggcag
cgcgcccagatgcagcagcgcctggccgagaaggagaaggaacaaaaggaggaaaacctc
cgcatgctcgcgcagcaggcgcgcgaggagcgcgccggcgccggccagcgagactcgagg
tcacgctcgcgttcgcgcagctacagcggctccgactcgggctccgacagcgaggaagcc
gaggtgcgcgagcgcgagagggcgcgcaaggacaagatgcgcgaggaggagaggaagctg
cgccagtcgcgcatgggcgccgagcggagggtgcaggtcatggcgcgcgagcagaaccgc
gacatatccgagaagattgccctcggcctggccaagcccacccagtccaaggagaccatg
tacgactcgcgcctgttcaaccagtcgagcggattcgacagcggcttcaacgaggacaac
ccctacgacaagccgctgtttgcggcccaagacgccatcagcagcatctaccggcccaag
gcaaacatggacgacgacgaggacgaggcggcgggcgacaaggagatggccaagattcag
aaagcgagccggttcggcgaggcactcggcagggggacgttcaagggtgccgaggaggca
gagggcgatgccatctccagcatccagccctcccaacataaagtggagtga
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