Verticillium dahliae: VDAG_08734
Help
Entry
VDAG_08734 CDS
T03450
Name
(RefSeq) pectin lyase
KO
K01732
pectin lyase [EC:
4.2.2.10
]
Organism
vda
Verticillium dahliae
Brite
KEGG Orthology (KO) [BR:
vda00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
VDAG_08734
Enzymes [BR:
vda01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.10 pectin lyase
VDAG_08734
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CBM_1
Pectate_lyase_4
LbR_Ice_bind
Motif
Other DBs
NCBI-GeneID:
20710197
NCBI-ProteinID:
XP_009649346
UniProt:
G2XF02
LinkDB
All DBs
Position
1
AA seq
418 aa
AA seq
DB search
MRASMFLAVAVGVLSPAYAQVVGKAFGMAAGTTGGGSATPAVPADIKHTPRVILIDREFN
FIGSEGTATSVGCENKDCPVSKGGQDYIGTLSCGDTARMNPIASVKYDTAGTKPMQVGSN
KSLVGVGNKGVIVGKGLRIIGSKNIIIQNIHFTNINPKSVWGRRCPDAGQHGTTSGSTTT
SSPSSAASSWSRAGTPPAVSPCRTTRFDGATKWSASCNGQHYWALPLHRRPRTSSPSRET
GCTTSSGRAPHYGTYKNGATNGPSSPVTRSPRPAPTALHPGTRGTACVSAIGRACQPNQR
DSTSGTLPAIEETDALTQLRKDAGANIAPAKPASGVEASVKANAGVGKINAGTTTPAPAP
KPTTTTAAAPKPTATTPSTVGSGTVALWGQCGGSGWTGATTCAQGTCKVQNQWFSQCL
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgcctccatgtttctcgccgtcgcggtcggcgtcctgtccccggcgtacgctcag
gtcgtgggcaaggcgttcggaatggcagccggcacgactggcggcggcagcgcgacgccg
gccgtcccggccgacatcaagcacactccccgtgtcatcttgatcgaccgggaattcaac
ttcatcggctccgagggcaccgcgacctcggtcggctgtgagaacaaggactgccccgtg
tccaagggtggccaggactacattggaacgctttcatgcggcgacacagccaggatgaat
cccattgcctcggtcaagtacgacactgccggcacaaagcccatgcaagtcggcagcaac
aagtctctcgtcggtgtcggcaacaagggtgtcattgtcggcaagggtctgcgcattatc
ggctcgaagaacatcatcatccagaacatccacttcaccaacatcaaccccaagtcggtg
tgggggcggcgatgccctgacgctgggcaacacgggacaacatctggatcgaccacaaca
agttctccctcgtcggccgccagttcatggtctcgggctgggacgccgccggccgtgtca
ccgtgtcgaacaacgaggtttgacggcgcgaccaagtggtccgccagctgcaacggccag
cactactgggcccttcctcttcatcggcggccaaggacttcttcaccttctcgggaaact
ggctgcacgacatcttcgggccgcgcgccgcattacggcacctacaagaacggcgccacc
aacggtccaagcagcccggtgacccgcagtccacgccccgcgccaacagcattacatcca
gggacaaggggcaccgcctgcgtctccgccatcggccgcgcctgccagcccaaccagcgc
gacagcacctccggcaccctcccggccatcgaggagaccgacgccctgacccagctgcgc
aaggacgccggcgccaacattgctccggccaagccggcctccggcgtcgaggcgagcgtc
aaggccaacgccggcgtcggaaagatcaacgccggcaccacgacgcctgctccggcgccc
aagcccaccaccaccacggctgctgcgcccaagcccaccgccacgacgccgtcgacggta
ggttccggcaccgtcgctctctggggccagtgcggcggttccggctggactggcgccacc
acgtgcgcgcagggcacctgcaaggtgcaaaaccagtggttctcccagtgcctctga
DBGET
integrated database retrieval system
