Verticillium dahliae: VDAG_08775 Help Entry VDAG_08775        CDS       T03450                                  Name (RefSeq) chromodomain helicase hrp3   KO K11367   chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-] Organism vda  Verticillium dahliae Brite KEGG Orthology (KO) [BR:vda00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:vda03021]     VDAG_08775    03036 Chromosome and associated proteins [BR:vda03036]     VDAG_08775 Transcription machinery [BR:vda03021]  Eukaryotic type   RNA polymerase II system    Coactivators     SAGA/TFTC/STAGA complex      VDAG_08775 Chromosome and associated proteins [BR:vda03036]  Eukaryotic type   Histone modification proteins    HAT complexes     SAGA complex      VDAG_08775     SLIK complex      VDAG_08775 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  SNF2-rel_dom HTH_Hrp3 Helicase_C Chromo HDA2-3 CHD1-like_C ResIII DUF5809 Cdh1_DBD_1 CDH1_2_SANT_HL1 AAA_22 DHR-2_Lobe_C Motif Other DBs NCBI-GeneID:  20710238 NCBI-ProteinID:  XP_009649387 UniProt:  G2XF43 LinkDB All DBs Position 1 AA seq 1604 aa AA seqDB search MSSPLQNGSSDGHRSPRMPSASPRVASPRRSPSETSDQQDDAVDAPSPSPDAEDSTMYMN GGHDFAESSPSADENNASDDADFDMEDDLPNVQSDGAVDALSSSNDSQRPSKRKAGVEVQ EDLYIKANPELYGLRRSTRPREQRKIVDSDDSESDVPVNRRKPARPSASKVNTPIRQASA DDSDSDNYGGARAKTLQKKARRQREAQPSSLLAEKRWSSRRAAQTVQQGGYEESDFEDEE DEAAQDAQYYAPEADNSPYIDKVLRHRLKDGLELSFESTRQDFEYYIKWQGKSHLHDTWE TAQTLRDVRGYRKLENYFRVVVDHELYIRFGFDIPPETKEQFFLDRERVEEALEDYTKVD RVVAVRDGDEETEYLVKWKGCYYDECTWEVASAISTDFQDKIDQFLDRSSRQWVSDRTET NPDTRTRMTKLEAQPDYIKGGELRTFQLRGLNFLCLNWTRANNVILADEMGLGKTVQSVS FMSWLRNDREQEGPFLIVAPLSVIPAWGDTFDNWSPDMNYVVYLGNEASRQTIRENELMI NGNSKKPKFNALITSYEMILHDWSFLQTIKWQALLVDEAHRLKNKESQLYAKLVSFGVPC KILITGTPIQNNLAELSALMDFLNPGKVIIDEELETLTGADTQEKLQDLHTSIAPYILRR TKETVESDLPPKTEKIIRVELSDVQLEYYKNILTRNYAALSDATGQKNSLLNIMMELKKV SNHPYMFGGAEDRVLAGSTRREDQVKGLIASSGKMMLLDQLLTKLKKDGHRVLIFSQMVK MLDILGDYLALRGYKFQRLDGTIAAGPRRMAINHFNAEGSDDFCFLLSTRAGGLGINLMT ADTVVIFDSDWNPQADLQAMGRAHRIGQKKPVSIYRLVSKETVEEEVLERARNKLLLEYL TIQAGVTDEGKAFRDEFNKKGLKMDGPSSADDIQWILKMRSQKMFEQTGNQERLEQLDID SILENAEVTKTKVDDKMNLSSGGIDWDNFMQYTDVKVDDLALDWDQIIPAEELENIKAEE EKRRHEAYLAKVAAESAPRRAAVKNRHNENDRADRVAKKRQREEQQRQEAEEQRALLSDP RRPLNEKETRNLLKAFYRYGAMEDRGDEIVHEARLTERDREFLSSIIDDFTKVCGQALDD NYSKLEEDERKLGKSLTKKDKKAVLIDFGEVRKMNAETAIERPKQLRLLRQVLRKNNDDK SFRLPDASKAAHYSCEWGAREDGMLLVGIDRYGFGAWTQIRDDAGLDLQDKFFLEEHRVE KKEERNKASEKSINSPGAVHLVRRSEYLLSVLQSKHSTDAATLKAVENHHRNNKKHLNGG RRSELGSAAASPAPHLSKKNSSHRDRERERDHHRSRSNVDDRGTPRPESKRKHSGHDEGR IPKHRRTDDSRRSKGHADDRKSPRPEKRRHREEDGDRKHRRPDESRHKDDRRRSHDNSQA HDEDRERRNQALARLADLRLMGDSREEREKDPDAMLWYLLKPVRENFEIILGTTKDKVKS SKERARIFGSELVVIGSFLDREFVRESDKPLKNRFWYVYLASPATQTTLTQWCREFLATL WPVDSTSNPVTADRLSFLYRTIRDREQSDAKKKAQNSNGTAATS NT seq 4815 nt NT seq  +upstreamnt  +downstreamnt atgtctagccctctccagaacggctcctcggacgggcatcgatcgcctcgaatgccctcc gcctccccccgcgtcgcgagtccccgccgaagccctagcgagacctccgatcagcaagat gacgcggtggacgccccgtcgccctcgcccgatgccgaagactcgaccatgtacatgaat ggcggtcatgactttgccgaaagtagtccttcagccgatgaaaacaacgcgtcagatgat gccgacttcgacatggaggacgaccttcccaatgtacagagcgacggcgctgtcgacgcg ttgtctagctccaacgactcccagaggccttcaaaacgaaaggctggtgtcgaagttcaa gaagacctctacatcaaggccaatccagagttgtatggtctgaggagaagtacgcgacca agggagcagcgcaagatcgtcgattctgatgattcggaatccgatgtgcctgtcaatcgg agaaagcctgcccgcccttcagcctcaaaagtcaacacccctattcgacaggcatcggcc gacgattcagactcggacaactacggtggcgctcgagcgaaaactctgcaaaagaaagcc cgccgccagcgcgaggcacaaccatcctcactgttggccgagaagaggtggtccagtcgg cgcgctgcccagacagtgcaacaaggcggttacgaagagagcgacttcgaagacgaagaa gacgaggccgcacaggacgctcagtactacgcccccgaagcggacaactcgccatacatt gacaaagtcttgcgtcatcgtctcaaagatggcctcgagctgagcttcgagtcgacacgg caagactttgaatactatatcaagtggcagggcaagtctcacctccacgacacctgggag actgcccaaacactgcgcgacgtgcgaggctaccgaaagctcgagaactactttagagtt gtcgttgatcatgagctctacatccgattcggattcgacatcccgcctgagaccaaagag caattcttcctggatcgagagcgtgttgaagaagcgctcgaagattacaccaaggtggat agagtggtagctgttcgagacggcgatgaagagaccgagtatctcgtcaagtggaagggc tgctactatgatgagtgcacctgggaagttgcctcagccatcagcaccgacttccaggac aagatcgatcagttccttgaccgatcctctcgccaatgggtgtcagatcggaccgagacc aacccagacacgcgtacaagaatgacgaagcttgaagcccaacccgactacatcaagggt ggtgagctacggaccttccagctccgtggtctgaacttcctctgtctgaactggacgcgg gcgaacaatgtcattcttgccgacgaaatgggtctcggaaagacggttcaaagcgtgtca ttcatgagctggcttcgcaacgaccgcgaacaggaaggtcccttccttattgtcgctcca ctcagtgtcatcccagcatggggtgatacctttgacaactggtctccggacatgaactat gtcgtgtatctcggcaacgaggcctctcgccagactatccgcgagaatgagctaatgatc aacggtaactcgaagaagcccaagttcaatgctctcatcacctcgtacgagatgattctg catgactggtcattcctgcagaccatcaagtggcaggctctgctggtcgacgaagcacac cgcctgaagaacaaggagtctcagctatatgccaagctggttagcttcggcgttccctgc aagatcttgatcaccggtaccccgattcagaacaacctcgccgagctttcggctttgatg gacttcttgaacccgggcaaagtcatcatcgatgaagagctcgagactctcaccggtgct gatacccaggaaaagctgcaggacctgcacacatcgatcgccccgtatattcttcgtcgt acaaaagagactgtggagtctgaccttccgccaaagacggagaagatcatccgcgtcgaa ctctctgacgtgcaactggaatactacaagaacatcttgacccgcaattacgccgccttg tccgacgctaccggccaaaagaattcgctcctgaacatcatgatggaactgaagaaagtc agcaaccatccttacatgtttggcggagccgaggacagggttctcgcaggcagcactcgt cgagaggaccaagtcaaaggcctcattgccagtagtggaaaaatgatgctgctcgatcag ctcttgacaaaactgaagaaagatggccaccgagtcctcattttcagccagatggtgaag atgcttgatattctcggtgattatcttgccttgcgaggctacaagtttcagcgtctggat ggtacgattgcggctggtcctcgtcgtatggcaatcaaccatttcaatgccgagggaagt gacgacttctgtttccttctttctacgcgtgctggtggcctgggcatcaaccttatgacc gccgacactgtcgtaatctttgactcggactggaacccgcaggccgatctgcaagccatg ggccgcgcgcatcgtattggccagaagaaaccggtcagcatttaccgtctcgtttccaag gaaaccgttgaggaggaggtgcttgaacgggcacgcaacaagcttcttcttgagtatctc accatccaggccggtgtcactgatgaaggcaaggccttccgcgatgagttcaacaagaag ggcttgaagatggatggtcccagctcggccgatgacattcagtggatcctcaagatgcgc tcgcaaaaaatgtttgagcagaccggtaaccaggagcgtcttgaacaactggatatcgac tccatcttggaaaatgctgaagttaccaagacaaaggtcgacgacaagatgaacctcagc agtggtggcatcgattgggacaactttatgcagtacaccgacgtcaaggtcgacgatctg gctcttgattgggaccagatcatccctgccgaggagcttgagaacatcaaggctgaggag gagaagcgccgtcacgaagcttatctcgccaaggtcgccgcggagagcgcaccacgccga gccgccgtcaagaaccgccataatgaaaatgacagagctgatcgcgtcgccaagaagcgg cagagggaagaacagcaacggcaagaggccgaggagcagagggctctactgtccgatccc agacgtcctttgaacgagaaggagacccgcaaccttctcaaggcattctatcgttacgga gccatggaagaccgtggcgatgagattgtccatgaagctcgcctgacggaacgagacagg gagttcttgagttccatcatcgatgactttaccaaggtctgcggtcaagctctggatgac aactactcgaagctggaggaagacgaacggaagcttggaaagtctctgacaaagaaggac aagaaggcagtcttgatcgactttggagaggttcgcaagatgaatgccgagacagccatt gaacggcccaagcagctgcgtctcctccgtcaagtcctgcgcaagaacaacgacgacaag tcttttcgtctaccggacgcctccaaggcagcccactacagttgtgaatggggtgctagg gaagacggcatgcttctggtcggcattgaccggtatggtttcggtgcctggacgcaaatt cgcgacgatgctggcctggatctgcaagacaagttcttcctggaagagcatcgtgttgag aaaaaggaggagcgcaacaaggccagcgagaaaagtatcaactctccaggcgcggtccat ctggtccgtcgttccgaataccttctttccgtcttgcagtcgaaacattccaccgacgct gccacactgaaggctgtggaaaatcaccacaggaacaacaagaagcacctcaatgggggc cgacgcagtgaacttggtagtgcggctgcatcacctgctcctcacctgagcaagaagaac agcagccaccgggaccgggaacgagaacgcgatcatcacaggtcacggagtaatgtggac gaccgcggaacgccgcgccccgagtccaagaggaagcactcgggacacgatgagggacgc attcccaaacaccgacgaactgatgacagtcgtcggtcgaagggtcacgcagacgaccgg aaatctcctcgccccgaaaagagacgccaccgagaagaagacggcgatcgtaagcatcgc aggcccgatgagtcccggcataaagacgatcgacgccgctcgcatgacaacagtcaggct catgacgaggatcgcgagcgtagaaaccaggctcttgcacgcctcgcagatcttcgcctc atgggcgacagccgcgaagaaagagaaaaggaccccgatgcgatgctttggtatctactc aaacctgtacgggagaactttgaaatcattctcggcacgacaaaggataaggtaaagtct agcaaggagcgtgcgaggatcttcgggtcggagctggtcgtgattggcagctttctcgat cgcgaatttgtccgagaatcggacaagcccctgaagaatcgcttctggtacgtatatctt gcttcacccgccacacaaacaacgctgactcaatggtgtagggaattcttggctacgctg tggcctgttgacagcaccagcaaccccgtgaccgcggacagactgagcttcctatacagg accatccgcgaccgggaacagtcggacgcgaagaagaaggcgcagaactccaacggcaca gccgctacctcttag

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