Verticillium dahliae: VDAG_08809
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Entry
VDAG_08809 CDS
T03450
Name
(RefSeq) PUF6 protein
KO
K14844
pumilio homology domain family member 6
Organism
vda
Verticillium dahliae
Brite
KEGG Orthology (KO) [BR:
vda00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vda03019
]
VDAG_08809
03009 Ribosome biogenesis [BR:
vda03009
]
VDAG_08809
Messenger RNA biogenesis [BR:
vda03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
VDAG_08809
Ribosome biogenesis [BR:
vda03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
VDAG_08809
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CPL
PUF_NOP9
CTI
Motif
Other DBs
NCBI-GeneID:
20710272
NCBI-ProteinID:
XP_009649421
UniProt:
G2XF77
LinkDB
All DBs
Position
1
AA seq
708 aa
AA seq
DB search
MATKAAATGSKRKAGPMGKATSDKSAKKVKTDAPKKKKAAPVESPADSSDDFDGIDDDES
DGGAKLEQSPPQKKKYDAGAKAKADNITGVGKPVITESSKEAHALQKKLARERKAAKPLG
DEVQRTKKIWERLRRKSHVPSEERKQLLEELFTIITGRVKDFVLKHDAVRAVQTAIKYSN
AAQRKQICTELQGTFSQLAESRYAKFLIAKLVVQKEPEIRDMIIPEFYGRVRRLINHPEA
SWILDDIYRQVASKEQKAILLREWYGPEFALLERNKDEKPTSDLAVILDESPSKRGPIMK
TLCDMINSLVQKKMTGFTMLHDAMLQYFLNIKPGSDEHTAFLDLLRDDESGDLFKNMAFT
RSGSRLACLLLAHGSSKDRRNILKVYKDNFVLMSGDANAHMVILTAFDVIDDTKMTSKVI
FSELIGDDEEKVAENIIASMNNQYARATLMYPIEGQSKALFLSNMSDDKAILQEVHEIRK
TTSKKDDDIRRAELAAVLAPSLLRTIVAAAPTLLADSFGCHIVTEVLLSVGGDKTKALEA
VAAVAEGDPTAEPMELDNHVAQQAHVSQTAWGGRALKTLIAGGKYNKQTGKVEQVEPPLK
FADALYPVIEDHVVQWATGPSSLVVLALLESPDFSHGKELKATLKKSKKQLQAAATEETA
EQKARREADAAEEDSDKGDKKAKKAKKGGAKPERPVGNSGTRLLLENL
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccaaggctgccgccaccggaagcaagcgaaaggctggccccatgggcaaggcc
acctccgacaagtcggccaagaaggtcaagacggacgcccccaagaagaagaaggctgcc
cccgtcgagagccccgccgacagcagcgacgactttgacggcatcgacgacgacgagtct
gacggcggcgccaaactcgagcaatcgcccccgcagaagaagaagtacgacgccggcgcc
aaggccaaggccgacaacatcactggcgtcggaaagcccgtcatcacggaatcttccaag
gaggcccacgctctccagaagaagctggcccgcgagcgcaaggctgccaagcctctcggc
gatgaagtccaacggaccaagaagatctgggagcgcctgaggagaaagtcccacgtcccc
tcggaggagaggaaacagctgctcgaggagctcttcaccatcatcaccggccgcgtcaag
gactttgtcctcaagcacgacgccgtgcgcgccgtgcagacggccatcaagtactccaac
gccgcccagaggaagcagatttgcaccgagctccagggcaccttctcccagctcgccgag
agccgatacgccaagttcctcatcgccaagctcgtcgtccagaaggagcccgagatcagg
gacatgatcatccccgagttctacggcagggttcgccgtctcatcaaccaccccgaggcc
tcgtggatcctcgacgacatttaccgccaggtcgccagcaaggagcagaaggccatcctc
ctgcgcgagtggtacggccccgagtttgccctgctcgagcgcaacaaggacgagaagccg
acctcggacctcgccgtcattctcgacgagtcccccagcaagagggggcccatcatgaag
acgctgtgcgacatgatcaactcgctggtgcagaagaagatgaccggtttcaccatgctc
cacgacgccatgctgcagtatttcctcaacatcaagcctggcagcgacgagcacacggcc
ttcctcgacctgctccgcgacgacgagagcggcgacctcttcaagaacatggcctttacc
cgctccggctcgcgtctcgcgtgcctcctcctcgcccacggttcctccaaggaccgaagg
aacatcctcaaggtctacaaggacaactttgtcctcatgtccggcgacgccaatgcccac
atggtcatcctcacggcgtttgacgtgattgacgacacaaagatgacgtccaaggtcatc
ttctctgaactcatcggcgacgacgaagaaaaggtcgccgagaacatcatcgcgtccatg
aacaaccagtacgcccgggcaacgctgatgtaccccatcgagggtcagtccaaggccctg
ttcctctccaacatgagcgacgacaaggccatcctccaggaggtgcacgagatccgcaag
acgacgagtaagaaggacgatgacattcgacgcgcagagttggcagccgtcctggcacca
tccctcctccgcaccattgtcgccgccgccccgacgctgctggccgactcgttcggctgc
cacatcgtcaccgaggtcctcctgtccgtcgggggcgacaagacgaaggcgctcgaggcc
gtcgccgccgtcgccgagggcgaccccaccgccgagcccatggagctcgacaaccacgtc
gcgcagcaggcccacgtgtcgcagacggcctggggcggccgcgcgctcaagacgctcatc
gccggcggcaagtacaacaagcagacgggcaaggtggagcaggtcgagcccccgctcaag
tttgccgacgcgctgtaccccgtcatcgaggaccacgtcgttcagtgggccacgggcccc
agctcgctcgtggtgctcgcgcttctcgagagccccgactttagccacggcaaggagctc
aaggcgacgctcaagaagagcaagaagcagctgcaggctgccgcgacggaagagacggcg
gagcagaaggccaggcgcgaggccgacgcggcggaggaggacagcgacaagggtgacaag
aaggccaaaaaggcaaagaagggcggcgccaagcccgagaggccagtaggcaactctggc
accagactgctgctggaaaacttgtaa
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