Verticillium dahliae: VDAG_08829
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Entry
VDAG_08829 CDS
T03450
Name
(RefSeq) pre-mRNA-processing factor 31
KO
K12844
U4/U6 small nuclear ribonucleoprotein PRP31
Organism
vda
Verticillium dahliae
Pathway
vda03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
vda00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
VDAG_08829
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
vda03041
]
VDAG_08829
Spliceosome [BR:
vda03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
VDAG_08829
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nop
Prp31_C
Motif
Other DBs
NCBI-GeneID:
20710292
NCBI-ProteinID:
XP_009649441
UniProt:
G2XF97
LinkDB
All DBs
Position
1
AA seq
596 aa
AA seq
DB search
MSTLADELLQDFEDSGSENENEERQDDELGVAPSASSGLLGNGNGLNDMDVDDADDAEDD
DEEMNGIPRSASDAVEDAEDAKAKVEKMQLGAVDDVRSVASLMQTLEPVLEKIAQYQSQP
AASRVIGNIEDHPEYHLLTQSNSLSTLIDGEIILVHKYIRDHYSIRFPELETLITNPVEY
AKVVSILGNGPLDSENIKALQTSTDNPLKSTLKSVLDGPSLMIVTVEATTSKGREMSADE
LARVFRAAAMVLSLEKAKKTLTDYVQSRMNLFAPNLTVLIGSLTAAQLLNAAGGLTGLSK
TPACNIAAWGSKKGAGAAGMATNIGIRQQGFLYHSSIVQGIPNDLKKQAMRIVSAKLVLA
ARVDRIHSSPDGATGEELKSACLERLEKLTEPPPNKGARALPAPDEKLSRKRGGRRARKA
KEATAMTELRKAQNRMAFGKEEREVGYGTGEGTEGMGMIGQGSEGKIRNLQVDQRTRAKL
SAKNKGWGAASSLGGAASSFRGFGQAGASSMDLRGKGLRTSGVGSSLGGTGTGVASSLAF
TPVQGLELVDPKMQAELSRKRKAEEDRWFKGGTFTQGTSGQASPTSLCHSLASQTS
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacacttgcagacgagctcctgcaagatttcgaggactcgggctccgaaaacgaa
aacgaagagaggcaggatgacgagcttggcgttgcgccaagcgcaagcagtggcctactc
ggcaatggcaacggcctgaacgacatggatgtcgacgacgcagacgacgccgaagacgat
gacgaggaaatgaacggtatcccccggagcgcgtccgacgcggtagaggatgccgaggac
gccaaagccaaagtcgagaagatgcagctcggcgccgtagatgacgtccgcagcgtcgcc
agtctgatgcagacccttgagccagtgttagagaaaatcgcccagtaccagtcacaaccc
gccgcgtcgcgcgtgatcggcaacatcgaagaccatcccgaatatcacctcttgacgcag
tcgaacagtctttctacgctcattgacggcgagattatccttgtgcacaagtacattcgc
gatcactactccatccggttcccggaactcgaaacgctcatcacgaacccggtggaatat
gccaaggtcgtgtcgatcctcggcaacggccctctggactcggagaacatcaaggcgttg
cagacttcgacagacaaccctctcaagagcacgctcaagtcagtgctggacggaccctcg
ctgatgattgtcaccgtcgaggccaccacgagcaagggtcgcgaaatgtcggcggacgaa
ctcgcgagggttttccgggcggccgcgatggttctctcgttggagaaggcaaagaagact
ctcacggactacgttcagtctaggatgaatcttttcgcgcccaacctgacggtcctcatc
ggctcgctgacggcggcgcaactgctcaacgctgccggtggactcacgggcctttcgaag
acgccggcctgcaacattgcggcgtgggggtccaaaaagggggccggcgccgccggcatg
gccaccaatatcggaattcggcagcaggggttcctgtaccactcctcgatcgtgcagggg
atccccaacgacctgaagaagcaggcgatgcgcatcgtctccgccaagctcgtcctcgcc
gcgcgggtcgaccgcatccactcgagcccggacggcgcgacgggcgaggagctcaagtcg
gcgtgcctcgagcggctcgagaagctgacggagcctccgcccaacaagggcgcccgcgcg
cttccggcgcccgacgagaagctctcgcgcaagcgcggcggcagacgcgcgcgcaaggcc
aaggaggcgacggccatgacggagctccgcaaggcgcagaaccgcatggcgtttggcaag
gaggagagagaggtcggctacggcacgggcgagggcacggagggcatgggcatgatcggg
cagggcagcgagggcaagatcaggaacctgcaggttgaccagcgcacgcgggccaagctc
agcgccaaaaacaagggctggggcgctgcctcgtcgctgggcggcgcggcctcttccttc
cgcgggttcggccaggcgggcgcctcgagcatggacctccgtggcaagggtctccgcacg
tcaggcgtgggctcgtcactgggtggcaccggcacgggtgtggcatcgtcgctggcgttc
acgccggtgcagggcctcgaactcgtcgatcccaagatgcaggctgagctcagtaggaag
cgcaaggcggaagaggaccgatggttcaaggggggcaccttcacccaggggacgtcagga
caggcaagtcccacgtcgttgtgtcacagtctcgcgtcccagacttcctaa
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