KEGG   Verticillium dahliae: VDAG_08829
Entry
VDAG_08829        CDS       T03450                                 
Name
(RefSeq) pre-mRNA-processing factor 31
  KO
K12844  U4/U6 small nuclear ribonucleoprotein PRP31
Organism
vda  Verticillium dahliae
Pathway
vda03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:vda00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    VDAG_08829
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:vda03041]
    VDAG_08829
Spliceosome [BR:vda03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6 snRNP specific factors
    VDAG_08829
SSDB
Motif
Pfam: Nop Prp31_C
Other DBs
NCBI-GeneID: 20710292
NCBI-ProteinID: XP_009649441
UniProt: G2XF97
LinkDB
Position
1
AA seq 596 aa
MSTLADELLQDFEDSGSENENEERQDDELGVAPSASSGLLGNGNGLNDMDVDDADDAEDD
DEEMNGIPRSASDAVEDAEDAKAKVEKMQLGAVDDVRSVASLMQTLEPVLEKIAQYQSQP
AASRVIGNIEDHPEYHLLTQSNSLSTLIDGEIILVHKYIRDHYSIRFPELETLITNPVEY
AKVVSILGNGPLDSENIKALQTSTDNPLKSTLKSVLDGPSLMIVTVEATTSKGREMSADE
LARVFRAAAMVLSLEKAKKTLTDYVQSRMNLFAPNLTVLIGSLTAAQLLNAAGGLTGLSK
TPACNIAAWGSKKGAGAAGMATNIGIRQQGFLYHSSIVQGIPNDLKKQAMRIVSAKLVLA
ARVDRIHSSPDGATGEELKSACLERLEKLTEPPPNKGARALPAPDEKLSRKRGGRRARKA
KEATAMTELRKAQNRMAFGKEEREVGYGTGEGTEGMGMIGQGSEGKIRNLQVDQRTRAKL
SAKNKGWGAASSLGGAASSFRGFGQAGASSMDLRGKGLRTSGVGSSLGGTGTGVASSLAF
TPVQGLELVDPKMQAELSRKRKAEEDRWFKGGTFTQGTSGQASPTSLCHSLASQTS
NT seq 1791 nt   +upstreamnt  +downstreamnt
atgtcgacacttgcagacgagctcctgcaagatttcgaggactcgggctccgaaaacgaa
aacgaagagaggcaggatgacgagcttggcgttgcgccaagcgcaagcagtggcctactc
ggcaatggcaacggcctgaacgacatggatgtcgacgacgcagacgacgccgaagacgat
gacgaggaaatgaacggtatcccccggagcgcgtccgacgcggtagaggatgccgaggac
gccaaagccaaagtcgagaagatgcagctcggcgccgtagatgacgtccgcagcgtcgcc
agtctgatgcagacccttgagccagtgttagagaaaatcgcccagtaccagtcacaaccc
gccgcgtcgcgcgtgatcggcaacatcgaagaccatcccgaatatcacctcttgacgcag
tcgaacagtctttctacgctcattgacggcgagattatccttgtgcacaagtacattcgc
gatcactactccatccggttcccggaactcgaaacgctcatcacgaacccggtggaatat
gccaaggtcgtgtcgatcctcggcaacggccctctggactcggagaacatcaaggcgttg
cagacttcgacagacaaccctctcaagagcacgctcaagtcagtgctggacggaccctcg
ctgatgattgtcaccgtcgaggccaccacgagcaagggtcgcgaaatgtcggcggacgaa
ctcgcgagggttttccgggcggccgcgatggttctctcgttggagaaggcaaagaagact
ctcacggactacgttcagtctaggatgaatcttttcgcgcccaacctgacggtcctcatc
ggctcgctgacggcggcgcaactgctcaacgctgccggtggactcacgggcctttcgaag
acgccggcctgcaacattgcggcgtgggggtccaaaaagggggccggcgccgccggcatg
gccaccaatatcggaattcggcagcaggggttcctgtaccactcctcgatcgtgcagggg
atccccaacgacctgaagaagcaggcgatgcgcatcgtctccgccaagctcgtcctcgcc
gcgcgggtcgaccgcatccactcgagcccggacggcgcgacgggcgaggagctcaagtcg
gcgtgcctcgagcggctcgagaagctgacggagcctccgcccaacaagggcgcccgcgcg
cttccggcgcccgacgagaagctctcgcgcaagcgcggcggcagacgcgcgcgcaaggcc
aaggaggcgacggccatgacggagctccgcaaggcgcagaaccgcatggcgtttggcaag
gaggagagagaggtcggctacggcacgggcgagggcacggagggcatgggcatgatcggg
cagggcagcgagggcaagatcaggaacctgcaggttgaccagcgcacgcgggccaagctc
agcgccaaaaacaagggctggggcgctgcctcgtcgctgggcggcgcggcctcttccttc
cgcgggttcggccaggcgggcgcctcgagcatggacctccgtggcaagggtctccgcacg
tcaggcgtgggctcgtcactgggtggcaccggcacgggtgtggcatcgtcgctggcgttc
acgccggtgcagggcctcgaactcgtcgatcccaagatgcaggctgagctcagtaggaag
cgcaaggcggaagaggaccgatggttcaaggggggcaccttcacccaggggacgtcagga
caggcaagtcccacgtcgttgtgtcacagtctcgcgtcccagacttcctaa

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