Verticillium dahliae: VDAG_09045
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Entry
VDAG_09045 CDS
T03450
Name
(RefSeq) transcription regulatory protein SWI3
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
vda
Verticillium dahliae
Pathway
vda03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
vda00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
VDAG_09045
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vda03021
]
VDAG_09045
03036 Chromosome and associated proteins [BR:
vda03036
]
VDAG_09045
Transcription machinery [BR:
vda03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
VDAG_09045
Chromosome and associated proteins [BR:
vda03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
VDAG_09045
PBAF complex
VDAG_09045
GBAF(ncBAF) complex
VDAG_09045
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIRM-assoc_1
SWIRM
Myb_DNA-binding
Myb_DNA-bind_6
Motif
Other DBs
NCBI-GeneID:
20710508
NCBI-ProteinID:
XP_009655143
UniProt:
G2XG66
LinkDB
All DBs
Position
5
AA seq
674 aa
AA seq
DB search
MDESTNYGSPVNAASPTSNALLAQPPLAPETGSTRPDNSEDIQMGEAVNNEPIVKQDSAT
PAPITASDNPLDAPDGPAAETTISRDEDDAEIGKDAGDEPDADAAVTGTEVEGQEGKTKE
SVEAAARDHLISQTHAIILPSYSTWFDMNMVHEIERKAMAEFFNSRNRSKTPVVYKDYRD
FMINTYRLNPAEYLTVTACRRNLAGDVCAIMRVHAFLEQWGLINYQVDGDHRPSNIGPPY
TGHFKVICDTPRGLQAFQPSADQEVTKGKQSVDTDNKASAAQAAKGDSKLEVSRNIYDGD
AKSTNLNATTEVKTNGETPTTNGVSASKEASTGPITKVNCHACAVDCTRLYYHAPTKEGS
AKAKYEICPSCFLDGHFPGDSSKSQYTRDGDGALVRHDNPTYTTVPERDAPWSDAELLRL
LEALERYDEEWTDIAEHVGTRTREECALQFLQLGIEDKYLESELTILGAHGDKQIPYNQA
DNPVMSVVGFLASLADPATTAAAAHSSADEMKRRLRNRLEGGESRETEASNGKGKERDGD
AMEVDVEQETTTTTVTTTTVRKMASIPLATTGARAVGLATEEEREMTRLVSAAANVTLQK
LDLKLKYFNEMEALLQAERRELERGRQQLFLDRLAFKRRVREVQQSFKTAAATVPGADTV
QPLSSGGKVQSLEI
NT seq
2025 nt
NT seq
+upstream
nt +downstream
nt
atggacgaatcgaccaactacgggtcgccggtcaatgccgcgtcacccactagcaatgct
cttctcgcgcagccgccgctcgcgcctgagacaggcagcaccaggccggataactctgaa
gatatccagatgggtgaagccgtgaacaatgaacccattgtcaagcaagacagcgccacc
ccagccccgatcacagcttcggataaccctctggatgcaccggatggtcccgcagccgaa
actaccatctcgcgcgatgaagatgacgccgagattgggaaagatgcgggtgatgaaccc
gatgccgacgctgctgtcactggcaccgaagtagaaggacaggagggcaagacaaaggaa
agcgtcgaggcagctgcccgtgatcatctcatttcccagacccacgccataatattgcca
agttacagcacttggttcgatatgaatatggtacacgagattgaacgtaaggccatggcc
gaattcttcaacagccgcaaccgcagcaagacccctgtcgtttacaaagactaccgcgac
ttcatgattaatacctatcgcctgaaccccgcggaatacttgaccgtcactgcttgcaga
cgaaacctggcaggtgatgtctgcgcaatcatgcgggttcacgcctttctcgagcaatgg
ggcctcatcaattaccaggtggatggagatcaccgaccctctaacattggtcccccctac
acaggccacttcaaggttatctgcgacacgccccgtggcctgcaagcctttcagccttcg
gccgaccaggaggtgaccaagggcaagcaaagtgtagacactgacaacaaggcctcggct
gcacaagctgcgaaaggagattccaagctagaggtgagtcgaaacatctacgacggagac
gccaaatcaaccaacctcaacgccacgaccgaggtcaaaaccaacggggagacaccaacc
acaaatggtgtgtcggcaagcaaggaggcatcgacgggccccatcacgaaggtcaactgc
cacgcctgtgccgtcgactgcactcgtctgtactaccatgctccaacaaaggagggtagc
gccaaggcaaaatatgaaatctgtcccagctgctttcttgatggtcacttccctggcgat
tcgagcaagtcacaatatactcgtgacggggacggtgcgcttgtccgccatgacaaccct
acgtatacaacggtgcccgagagagatgctccatggagcgatgcggaacttttgcgacta
ctggaggctctcgagcgttacgatgaagaatggaccgacattgcagagcacgtcggcact
cgtactcgcgaagaatgtgcgcttcagttcctgcaactcggtattgaggacaagtatctt
gaatcggaactcaccattcttggggctcatggtgacaagcaaatcccatacaaccaggcc
gacaacccagtcatgtctgtcgttggatttctagctagcttggctgacccagccaccaca
gccgcggctgcccactcttccgccgacgaaatgaagcgccgtctacgtaatcgtctcgaa
ggcggagagtcacgggagactgaagcctcgaatggcaagggcaaagaaagagatggtgat
gcaatggaggtggacgttgaacaggaaacgaccactacaaccgttaccacaacaaccgtc
cgcaaaatggcatcgataccactagcaacaacgggagcgcgcgctgttggtcttgccaca
gaggaggagcgtgagatgacgcgactggtgtcagcagcggccaacgtgacgctgcagaag
ctggacctgaagcttaagtatttcaatgagatggaggctctgctccaagccgagcgtcgc
gagcttgagagaggccggcagcagttattccttgaccgactcgcattcaagcgaagagtc
agagaggttcagcagtcgttcaagacagcggcggccacggttccaggagccgatactgtg
cagccattgagcagtggtggcaaggtgcagagcctggaaatttga
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