KEGG   Verticillium dahliae: VDAG_09227
Entry
VDAG_09227        CDS       T03450                                 
Name
(RefSeq) ATP-dependent rRNA helicase SPB4
  KO
K14809  ATP-dependent RNA helicase DDX55/SPB4 [EC:5.6.2.7]
Organism
vda  Verticillium dahliae
Brite
KEGG Orthology (KO) [BR:vda00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:vda03009]
    VDAG_09227
Enzymes [BR:vda01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     VDAG_09227
Ribosome biogenesis [BR:vda03009]
 Eukaryotic type
  Pre-60S particles
   Helicases
    VDAG_09227
SSDB
Motif
Pfam: DEAD ResIII
Other DBs
NCBI-GeneID: 20710690
NCBI-ProteinID: XP_009653824
UniProt: G2XFV3
LinkDB
Position
4
AA seq 421 aa
MALSATVTEKKKDPRDWRGLTPPLAEWILDFVASQGYQRMTPVQAATIPQFLGNKDVVVE
AVTGSGKTLAFLLPIVQKLLRLSEPTKRGHVFAIIVSPTRELAQQIYNVLMGLIAFHTAS
SEMLPFLKEDDKRPDSAVPIVVPQLLVGGTTTTQQDLSFFVRHSPNILVSTPGRLVELLA
SPHVHCSQSTFDMLVLDEADRILDMGFRQDLQRILSHLPKQRRTGLFSASVSEAVSQIIT
VGLRNPVKIAVRVKSLRDGNIIEDRKIPASLQMAYLLTPASQKMPALAQILDKLNPRPQR
SIIFLSTCAAVDYFQHILPDMLPAGFSLVPLHGKLPPKAGDVDRNKRKRRTNEAWSDKHE
KAEVRVERREKRQKKRDKERESKMTEDEKIEARELQDLIKEVRRKNGAKEAKEEEFGGFD
D
NT seq 1266 nt   +upstreamnt  +downstreamnt
atggcactctcagcgacggtcacagagaagaagaaggaccccagagactggcgcggtctt
acccctcccctggcagaatggatccttgatttcgtcgcaagtcagggctatcagcgcatg
acgcctgttcaggccgccaccattccccagtttctcggcaacaaggacgtcgtcgtcgaa
gctgtcaccggcagcggcaagaccctggcgtttctgctccccatcgtgcagaagctgctt
cgcctctccgaacccactaagcgcggccatgtcttcgccattatcgtctcaccaactcgc
gagcttgctcagcagatttacaacgttctcatgggcctcatcgccttccacactgcctcc
tcggagatgcttcccttcctgaaggaggatgacaagcgccccgactcagccgtgcccatc
gtcgtgccccagctgctcgtcggaggcacgaccacgacgcagcaagatctcagcttcttc
gtgcgccactctcccaacattctcgtctccacgcccggccgcctcgtcgagcttctcgct
tcgccccacgtccactgcagccagtccacctttgacatgctcgtcctcgacgaagccgat
cgcatcctcgacatgggcttccgccaggacctccagcgcatcctctcccacctgcccaag
cagcgccgaaccggtctcttcagcgcctccgtctccgaggccgtctcccagatcatcacc
gtcggcctgcgcaaccccgtcaagatcgctgtgcgcgtcaagtccctgcgcgacggcaac
atcatcgaggaccgcaagattcccgcgtctctgcaaatggcatacctcctcacgccggcc
tcccagaagatgccggccctcgcccagatcctcgacaagctcaacccgcgcccccagcgc
agcatcatcttcctctccacctgcgccgccgtcgactacttccagcacatcctccccgac
atgctccccgccggcttctccctcgtgcccctgcacggcaagctgccgcccaaggccggc
gacgtcgacaggaacaagcgcaagaggcggaccaacgaggcctggagcgacaagcacgaa
aaggccgaggtgcgcgtcgagaggcgggagaagcggcagaagaagagggacaaggagcgc
gagagcaagatgaccgaggacgagaagatcgaggccagggagctgcaggacctcatcaag
gaggtaaggaggaagaatggcgccaaagaggctaaggaggaggagtttgggggctttgac
gattag

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