Verticillium dahliae: VDAG_09472
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Entry
VDAG_09472 CDS
T03450
Name
(RefSeq) pre-rRNA processing protein Utp22
KO
K14544
U3 small nucleolar RNA-associated protein 22
Organism
vda
Verticillium dahliae
Pathway
vda03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
vda00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
VDAG_09472
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vda03009
]
VDAG_09472
Ribosome biogenesis [BR:
vda03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
VDAG_09472
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nrap_D4
Nrap_D5
Nrap_D2
Nrap_D3
Nrap
Nrap_D6
DNA_pol_phi
BUD22
DUF2457
Nop14
IFT57
Astro_capsid_p
Motif
Other DBs
NCBI-GeneID:
20710935
NCBI-ProteinID:
XP_009656728
UniProt:
G2XH40
LinkDB
All DBs
Position
7
AA seq
1127 aa
AA seq
DB search
MESGAKRRKVSHHGDALKSKRSVAMATATASPFVLQTEELLKEVKVDYAETFDGADALLK
QIKDVIDAIAPQEAAPISDATRKFQKKHHVQIPFPDPKPAADAPYKLAYAKPAACNVVGS
YVSRTMVQGQEDKCVDMIVQMPASLFQDKDFQAMRYFYRRAYYIATIAAGVREALGSSVD
LLFENLHENSLLPVLTVLPKVAEEKKGAGKAGKAGKAGKSEEDDSEEEDDSEDDDNEDED
DDDEDDDDDDDEDDDDDDSDAAYAIRIIPCAPDGLFSKSKLISTANNNKADGADAPTPFY
NSTLKAEETFVTYLRVLTRARTQCKAFADACILGKVWLEQRGLGGNMSGGGFGHFEWAIT
MALLLQKGGRNGQAALSSSLSSTELFKATVQFLGSTDFVAKPFVFGAHARGEEAIREAGP
VMFDADRELNILFKMSPWSANLLKYHAGITLELLNAHVADQFEAAFITKVDLPHQMYDIN
IEIEDIDLERNSAAADRQGPFWNFSSRVHKTLKKALNDRAALIHIKLPEQSAWELDTQPE
ASTPSVLIGVVFDLANMAKPMEYGPSAESQKEAARFRQFWGDKSELRRFKDGSILECVPW
KQTSAAGICEEITRYALKLHASVEESNIHFYGGKTPEGLEFTPVDKEAFDTARRAFQTME
HDLRSLEDLPLSIRRLAPVVPELRYASIRPPVIGFHKGTAVPMDVTLTFEASSKWPENVV
AIQEAKIEFLLDIDRRLKAAKDNITTCLGRDNAVRDSDNLAFLDVVYENGAAFRLRVHSD
PEETLLERQAKNKTLDPYVRLAAEETLHKIRWQNNDLPLHTQSIASFCTRLPALSPAIRM
TKHWFNSHKLTGHISEELIELLVLHVFLRPHPWKIPSSAQSGFLRTLLFLSRWDWRTQPL
VVDFSDDMSPEDAALSQTTLAAWRARDPNMNHAVLFVATSNDPTGQSYTRTAPTKLSATR
MTRLAKSAVRLVREQDVALEIDALFEPSLADYDLLLHLSSKEMKRVLRDAAADAGARHSA
FKNLDARTGKVPLPLARHPVDVLLGELEAAYEDSLIFFRGGRGDAVVGAIWQPKLRRQAF
RVGLPFNFSAVGDGDGDRDEVEVNKGAVLLEIARIGGAMIKRIEVAE
NT seq
3384 nt
NT seq
+upstream
nt +downstream
nt
atggagtctggcgccaaaagacgcaaggtctctcaccatggcgacgccctcaagtccaaa
cgatccgtcgccatggccacagccacggccagtcctttcgtcctgcagaccgaagagctt
ctgaaggaggtcaaggtcgactatgcagagacctttgacggcgccgacgccctgttgaag
cagatcaaggacgttattgacgccattgccccgcaggaggccgctcccatctccgatgcc
acgcgcaagttccagaagaaacaccacgtccagatcccctttcccgaccccaagcccgcc
gccgacgccccctacaagctcgcctacgccaagcccgccgcctgcaacgtcgtcggcagc
tacgtctcgcgcaccatggtccagggccaggaggacaagtgcgtcgacatgattgtgcag
atgcccgcctcgctcttccaggacaaggacttccaggccatgcgctacttttaccgtcgc
gcctactacatcgccaccattgccgctggcgttcgcgaggccctgggctcgtctgtcgac
ctgctgtttgagaacctccacgagaacagccttctgcctgttttgaccgtccttcccaag
gtcgcggaggagaagaagggtgcgggaaaggcgggaaaggcgggaaaggcgggaaaatcg
gaagaagacgactcggaagaggaggatgacagcgaagatgacgacaacgaagacgaagac
gacgacgacgaagacgacgacgacgacgacgacgaagacgacgacgacgacgacagcgac
gctgcatacgccatccgcatcatcccctgcgcccccgacggcctcttttccaagtccaag
ctcatctccaccgcaaacaacaacaaggccgacggcgcagacgccccgaccccgttctac
aactcaaccctcaaggccgaggagacattcgtcacatacctgcgcgtcttgacccgcgcg
aggacccaatgcaaagcctttgccgatgcctgcatcctcggcaaggtctggctcgagcag
cgcgggctcggcggcaacatgtcgggcggaggcttcggtcactttgagtgggccatcacc
atggcgctgctgctgcagaagggtggcaggaacggccaggcggccctgtcgtcttccctc
agcagcacggagctgttcaaggccacggttcagtttctcgggtccacagacttcgtcgcc
aagcccttcgtctttggcgcgcatgctcgtggcgaagaggcgattcgcgaggcaggcccc
gtcatgtttgacgccgaccgtgagctcaacatcctgttcaagatgagcccctggtccgcg
aacctactgaagtaccacgccggcatcacgctggagcttctcaacgcccatgtcgctgac
cagttcgaggcggccttcatcacaaaggtcgacctcccgcatcaaatgtatgacatcaac
attgagattgaagacattgatctcgagcgcaacagcgccgcagcggaccgccaaggacct
ttctggaacttcagctcaagagtgcacaagacgttgaagaaggcactgaacgaccgcgcc
gctctcatccacatcaagctgccggaacagtcggcatgggagctcgacacgcagcccgag
gccagtacgccgagcgtgctcatcggagtcgtctttgacctcgccaacatggccaagccc
atggagtatggtccgtcggccgagtcgcagaaggaagccgccaggttccgtcagttctgg
ggtgacaagtcggagctgcgaagattcaaggacggcagcatcctcgagtgtgtcccctgg
aagcagacgtctgcggcgggcatctgcgaggagattacccgctacgcgctgaagctgcac
gcgagcgtcgaggagagcaacattcacttctacggcggcaagacgccggaaggcctcgag
ttcacgcccgtcgacaaggaggctttcgacacggcgaggcgcgccttccagacgatggag
cacgaccttcgcagtctcgaggacctgcccctctccatcaggcggttggcgcctgttgtt
cccgaactccgctacgcctcgattcggccgcccgtcatcggcttccacaaaggcaccgcc
gttcctatggacgtgacgctcacgttcgaagcgtcgagcaagtggcctgagaatgtcgtg
gcgatccaggaggccaagattgaattcctgctcgacattgacaggaggttaaaggccgcc
aaggacaacatcacaacgtgcctcggccgtgacaatgccgtccgcgactcggacaacctg
gctttcctcgacgtcgtctacgagaacggcgcggcgttccgcctgcgcgtccactcggat
cccgaggagacccttctcgagcgccaggcaaagaacaagacgctcgacccctacgttcgg
ctcgccgccgaggagacgctgcacaagattcgctggcagaacaatgacctgccgctccac
acgcagtccatcgccagcttctgcacgcgcctccccgctctctcgcccgcaatccgcatg
accaagcactggttcaacagtcacaagctgacgggccacatttccgaggagctcatcgag
ctccttgtgctccacgtcttcctgcgcccgcacccgtggaagatcccctcgagcgcgcag
tccggtttcctgcgcaccctcctcttcctctcccgctgggactggcgcacgcagccactg
gtcgtcgacttttccgacgacatgtctccagaggacgcggcgctgtcgcaaacgacgctc
gccgcctggcgcgcgcgcgaccccaacatgaaccacgccgtcctcttcgtcgccacgtcc
aacgacccaacgggccagtcgtacacacgcacggcgccgacgaagctctcggcgacgcgc
atgacgcgccttgccaagtcggccgtccgcctcgtccgcgagcaggacgtggcgctcgag
attgacgccctcttcgagccgtcgctcgcagactacgacttgctcctccacctctcgtcc
aaggagatgaagcgcgtgctccgcgacgccgccgccgacgcgggtgcgcggcactcggcg
ttcaagaacctcgacgcccggacgggcaaggtgccgctcccgctggcacggcatcccgtg
gacgtgctgctcggcgagctcgaggccgcgtacgaggacagcctcatcttcttccgcggc
gggcgcggggacgccgtcgtcggggccatctggcagcccaagctccggaggcaggcgttc
cgggtcggcctgccttttaacttttcggccgtcggggacggggacggggacagggacgag
gtcgaggtgaacaagggggctgtcttgttggagattgcgaggattgggggggccatgatt
aagaggatcgaggttgcggagtag
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