Verticillium dahliae: VDAG_09660
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Entry
VDAG_09660 CDS
T03450
Name
(RefSeq) ribosome assembly protein RRB1
KO
K14848
ribosome assembly protein RRB1
Organism
vda
Verticillium dahliae
Brite
KEGG Orthology (KO) [BR:
vda00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vda03009
]
VDAG_09660
Ribosome biogenesis [BR:
vda03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
VDAG_09660
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
WD40_CDC20-Fz
WD40
WDR55
Beta-prop_EIPR1
WD40_WDHD1_1st
Beta-prop_RIG_2nd
Beta-prop_EML_2
CAF1C_H4-bd
Beta-prop_EML
Beta-prop_CAF1B_HIR1
ANAPC4_WD40
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_IFT140_1st
Beta-prop_WDR19_1st
Beta-prop_HPS5
Beta-prop_WDR75_1st
WD40_RFWD3
MIOS_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
WDR90_beta-prop_4th
Beta-prop_WDR35_TULP_N
Beta-prop_Vps41
Beta-prop_TEP1_C
Beta-prop_SCAP
Beta-prop_DCAF12
Motif
Other DBs
NCBI-GeneID:
20711123
NCBI-ProteinID:
XP_009656916
UniProt:
G2XI10
LinkDB
All DBs
Position
7
AA seq
492 aa
AA seq
DB search
MSKRTADTEMGDGPLKAGDRPEKMDVDGDNEMGEFEDEFEDEFESESEDEILEAGVDGRP
DAEREAEEKGAMEVDQGTFIVGRSKLEPGQTLAPDLTTYQMLHNLNTPWPCLSFDLLRDN
LGDNRKVYPATMYSVSGTQAASDRAEENGLMVMKFSGLSRMDKLEEDESDEEEDDDDDED
SDPILESKTIPLNSTTNRIRAHQIPSQDASRPPTTLTATMTESTNIFIHDITPHLTSFDN
PGTTITAQQNKPVSTIRAHKAEGYAVDWSPIVPGGKLLTGDNDGLIYATTRTDGGGFVTD
TRPFQGHTSSVEDIQWSPSEQSVFASASSDGTVRIWDVRSKSRKPALTVQVSDTDVNVLS
WSRQTTHLLASGADDGVFGVWDLRHWKGTGDKPTPIASFDYHKEQITSVEWHPSDDSIIA
VAAGDNTVTLWDLAVELDDEESKDTGGVKDVPPQLLFVHYLSNVKELHWHPQITGSLVAT
GDEFSIFRTISV
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaagcgaacggccgacacagaaatgggcgacggccccctcaaggccggtgatcgt
cctgagaagatggacgttgacggcgacaacgagatgggcgagtttgaagacgagttcgag
gacgagttcgaaagcgaaagcgaggatgagattctggaggctggagttgacggacgacca
gacgcagagcgcgaggctgaggagaagggtgctatggaagttgaccaaggcactttcatc
gtcggccggagcaagctcgagccaggccaaacgctggcacccgatctcaccacgtaccaa
atgcttcacaacctcaacacgccgtggccctgcctttcgttcgaccttctccgcgacaac
cttggcgacaaccgcaaggtttaccccgccacaatgtactcggtttccggtacccaggcg
gcgagtgatcgcgctgaggaaaacggactgatggtcatgaagttcagcggtctgagccgg
atggacaagctcgaggaggacgagtcggacgaggaggaggacgatgacgacgacgaggat
tccgaccctatcctcgagtccaagacgatccccctcaactcgacgaccaaccgtattcgt
gcgcaccagattccctcacaagatgcctcgaggccacctacaacactgacggccacgatg
actgagtcgaccaacatcttcatccacgacatcactccgcacctcacatcgttcgacaac
cccggcaccacaatcaccgcccaacagaacaagcctgtgtcgacgattcgcgcgcacaag
gccgagggatacgcggtggactggtcgcctatcgtccctggaggcaagctcctcaccggt
gacaacgacggcctgatctatgcgaccacccgcactgatggcgggggcttcgttaccgac
acccgtcctttccaaggccacactagcagtgtcgaagacatccagtggagcccttcggaa
cagtccgtcttcgcctcggcgtctagcgacggcacggtgaggatttgggacgtcaggagt
aagagcaggaaacccgccctgacggtccaggtcagcgacacggatgtgaacgtgctgtcc
tggtctcgccagaccacccatttgctggcctctggcgccgatgatggtgtgtttggcgtc
tgggatctccgtcactggaagggaacgggcgacaagcccacccccattgccagctttgac
taccacaaggagcagatcaccagcgtggagtggcacccgtccgacgacagtatcattgct
gtggcggcaggtgacaacaccgtcacgctgtgggatctagctgtcgagctggacgacgaa
gagagcaaggatacgggcggcgtcaaggacgtgcctccccagctgctcttcgtccactat
ctctcgaatgtcaaggagctgcactggcacccccagatcacgggcagcttggtggccacg
ggtgatgagttcagcatcttccgtacgattagcgtttaa
DBGET
integrated database retrieval system