Verticillium dahliae: VDAG_09730
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Entry
VDAG_09730 CDS
T03450
Name
(RefSeq) tRNA pseudouridine synthase
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
vda
Verticillium dahliae
Brite
KEGG Orthology (KO) [BR:
vda00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vda03016
]
VDAG_09730
Enzymes [BR:
vda01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
VDAG_09730
Transfer RNA biogenesis [BR:
vda03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
VDAG_09730
Prokaryotic type
VDAG_09730
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_1
TRPM_tetra
Motif
Other DBs
NCBI-GeneID:
20711193
NCBI-ProteinID:
XP_009652884
UniProt:
G2XHH6
LinkDB
All DBs
Position
3
AA seq
626 aa
AA seq
DB search
MASEANPSSESAAAAPAVDTTMDGGSNGTDSAPRAAQPTTGETGSPAAAEGGARGQERGN
DKKQQQQGKKNKQGGRNEWRRQMNDKRKQLGDARQAKRRKLDENGNAIDADNEIQEAVVV
DPRKANPFSISEIAAEERRPKRKVAVMVGYSGTGYYGLQINWDEKTIEGDLFKAFITAGA
ISKANADDPKKSSLSRCARTDKGVHAAGNLISLKLIIEDDDIVDKINAHLPDQIRVWGLQ
RTSNSFSAYQACDSRWYEYLLPTYCLLPSHPDSFLWKKLVESAQEKGYYDDFQSKLADMD
GFWAEVEEKAIKPILEQLEPQVRAEVLERIHASEDHPESALKKSALNDAMQVVPPATAVT
GEATSAEDTSTIATTGKTKNLGPVDFALRDMKNAYVKAKRAYQVTPERLDQLQAALDQYV
GTYNFHNYTIQKSFKDPSAKRHIKSFQVNKTPIQIRDTQWVSIKVHGQSFMMHQIRKMIS
MATLVVRCATPLTRIKESYGEDRIAIPKAPGLGLLLERPVFEGYSRKAVDSLGREPIDFT
KHDDKIQAFKDKEIYQRIFEVEEKENIFHTFFQQVDNFKSDYFLWLTAGGIQAGAIRASK
PFSKDDKASNVALVDDEDEDPEGGEG
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atggcttccgaagcaaacccttcgtcagagtctgccgctgcggcgcccgcggtcgacacc
accatggatggcggctcgaatgggaccgattctgcgcctcgcgcagcgcaacctaccaca
ggtgagactgggtcacctgcggcggcggaaggaggcgccagaggccaggaacgtggtaat
gataagaagcaacagcagcaaggcaagaagaacaagcagggcggtcgtaacgaatggcgg
cgccagatgaacgacaagcgcaagcagctgggcgatgccagacaggccaagcgacgcaaa
ctcgacgagaatggcaacgcaattgacgcagacaatgaaatccaggaggctgttgtggtc
gatcctcgaaaggcgaaccctttctcgatctccgaaatcgcggctgaagagcgacgcccg
aagcgcaaggttgctgtcatggtcggctactcagggaccgggtactacggcctgcagatc
aactgggacgagaaaacgatcgagggggacttgtttaaggccttcattactgcaggtgcc
atctccaaagcaaacgcagatgatcccaagaagtcgagtctttcgcgctgcgcgaggact
gacaagggcgtgcatgccgctggcaacctgatcagtctcaagctcatcatcgaagacgac
gacattgtcgataagatcaacgcacatctacccgaccagatccgagtctggggcctccag
cgaacgagcaattcttttagcgcctaccaggcctgtgactctcgatggtacgaataccta
ctgccgacatactgcctacttccctcccaccccgacagcttcttgtggaagaaactcgtc
gagtccgcacaagagaagggatactacgatgacttccagtccaaattagccgatatggat
ggcttctgggccgaggtcgaggagaaggcgatcaagcctatcctggaacaattagaaccc
caagtcagggctgaggttttagaaagaatccacgcatcagaggaccaccctgagtctgca
ctcaagaagtcggcgctcaatgatgccatgcaagtggtccctcctgctaccgccgtcacg
ggcgaggcgacgagcgccgaagatacaagcaccatagcaaccacgggcaagacgaagaat
cttggccccgtggactttgccctacgagacatgaagaacgcctacgtcaaagcgaagagg
gcgtaccaagtgacacctgagcgtctcgaccagctgcaagcggctctcgatcaatatgtt
ggcacctataactttcacaactacacgattcagaagagcttcaaggatccctccgctaaa
cgccatatcaagtctttccaagtcaataagacaccgatccagatccgtgatacgcagtgg
gtgtccatcaaggtccacgggcagagcttcatgatgcaccaaatccgcaagatgatcagc
atggcgaccctcgtcgttcgttgcgccacgcctttgacgcggatcaaggagagctacggc
gaagatagaatcgcgatccccaaggcgcccggtcttggcctgctattggagaggcccgtt
ttcgaaggctatagccgcaaggcggttgactcgctgggccgggaacccattgacttcacc
aaacacgacgataagatccaggctttcaaggacaaggagatctatcagcgtatcttcgag
gttgaggagaaagaaaacatcttccatacgttcttccagcaagtcgacaacttcaagtcc
gactacttcctctggttgaccgctggcggcattcaagcaggcgcgatcagggcgtccaaa
cctttcagcaaggatgacaaggcatccaatgttgcgctagtagatgacgaggatgaggat
cccgagggcggcgaaggctaa
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