Verticillium dahliae: VDAG_09844
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Entry
VDAG_09844 CDS
T03450
Name
(RefSeq) mRNA 3'-end-processing protein RNA14
KO
K14408
cleavage stimulation factor subunit 3
Organism
vda
Verticillium dahliae
Pathway
vda03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
vda00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
VDAG_09844
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vda03019
]
VDAG_09844
Messenger RNA biogenesis [BR:
vda03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
VDAG_09844
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Suf
TPR_14
Motif
Other DBs
NCBI-GeneID:
20711307
NCBI-ProteinID:
XP_009649484
UniProt:
G2XI62
LinkDB
All DBs
Position
1
AA seq
990 aa
AA seq
DB search
MATPDPQENEQEFEGASWEEEEEEGYEGANETQHSDQKDQEPDSALAQPSHGEPEEPEDE
GDDDEDGEDDGEDDGEDGEEDDQEDMEEQDETEELEEQQQDDDNDGDGDGSDDGAEYDPE
SVSITPIPQITEPASAPAPATAPAPAAPAKPRAAKPKVSGGFLVGDSDDEDDDAPRSNSA
LGQVASISRPQSALNVSTPNQAQVGASSTPVNGGPYAPPASVAAASAPALATSASPSVSA
PHTATTPAGRDPGDVVGRLEDRIKEDPRGDMDAWLALFAELRRLSHVDALRQAYDRFVTT
FPQAADIWVEWIKLELDSMNTTAAEALFQRSLLTVSDVQLWTTYINYIRRRNDLSNDPNG
QARQVISQSYEFIIDNVGMDRESGSLWKDWIQFIKSGPGVVGGPGWQDQQKMDQLRKAYH
RAITVPMSALTELWKDYDQFELGLNKATGRQFIQKRSPGYMTAKSASLQMDRKIGNLNRT
SLPRLPPAPGFAGATEYMEQVNIWKQWIQWEKEDPLVLADDEPEVLKQRILYVYKQALMA
LRFWPEMWVDAAEWCFENNIFKDGVDLGIKFLTDGIAANPESVLLALKHGDRIEMTLPVA
DTEESKEERAKAIRAPYDQVLETLYHMMQKLKEREKNELAKIEKAATEHAGRNDGDDNDD
QDQTLALEQRTQAVKQGFSLQTELLKRTISFIWIALCRAMRRTQGKGSQTKGLRQVFTEA
RGKGQLTSDVYVAVALIESVVYKDPAGGKIFDRGAKLFPEDEGFMLEYIKYLHLKDDTTK
RYSVDSFDPIAYRLIISPAVQLRPNLVMPSIEQATSVRDATPLPTASPVPQYLGTTNSPK
RPYPGDDQEEYNRPRKLARGQSPLKGAAGRRLDQQRQNQGAPLARDITFFLGILPPTHSY
NAQLFSASGLVNLLRDTPVPDYKSGATFEGSSGAYRRDAQQQFTQPPPGQWPPPSAPQYE
GSAPSSWPPPPNGYSGYTAPPTQQYGQYQY
NT seq
2973 nt
NT seq
+upstream
nt +downstream
nt
atggcgactccggatccccaagaaaacgagcaagagttcgaaggtgcttcctgggaagaa
gaggaggaagaagggtatgagggtgccaatgagactcagcatagtgaccaaaaagatcaa
gaacccgactctgcacttgctcaaccttcccacggtgaaccagaagaaccagaagacgaa
ggcgacgatgacgaggatggagaagatgatggcgaagatgatggcgaagatggcgaagag
gacgaccaagaggacatggaggaacaggacgagacggaggagctggaggaacagcagcaa
gacgatgacaacgatggcgatggtgatggcagcgacgatggcgccgagtacgaccccgag
tccgtttcgatcacaccgatccctcagatcacagaacctgcctccgcccctgctcctgcc
actgcccccgcgccggccgcgccggccaagccaagggctgcgaagcctaaggtgtccgga
ggattcctagtgggagactcggacgatgaggacgatgatgcgccccgttccaactctgca
ctgggtcaggtggcttccatttcccgcccacaatccgccctgaatgtgtcaacacccaac
caggcccaagtaggcgcctcgtccacgccggtcaacggtgggccatatgctcctcctgct
tcagttgctgctgcttccgcgcccgcgttggccacaagcgcttctcctagcgtaagcgca
cctcacactgccacaacacctgctggcagggatccaggtgacgttgtcggccgacttgag
gatcggatcaaggaagaccctcgaggcgatatggacgcatggcttgcgctcttcgcagag
ctccgccgcctcagccacgtcgatgctctgcgtcaggcctacgaccgcttcgtcacaaca
ttcccacaagctgccgacatatgggttgagtggatcaagcttgaactcgacagcatgaat
acaactgccgccgaggcactttttcaacgcagccttctcaccgtctcagatgttcagctg
tggactacctatatcaactacatccgccgccgcaatgacctcagcaacgatcccaacggc
caggcacgccaggtcatcagccaatcctacgaattcatcatcgataacgtgggcatggac
cgcgaatccggctcactgtggaaggactggatccagtttatcaagagcgggcctggcgtc
gtcggtggccctggctggcaggaccagcagaagatggaccagctacgcaaagcttaccat
cgtgctattaccgtgcccatgtcagccctaacggagctctggaaggattacgatcagttt
gaattgggcctgaacaaggctacgggccggcaattcatccagaagaggtcgcctggctac
atgacggccaagtctgcttccttacaaatggatcgcaagattggcaacctcaaccgcact
tccctgccccgtcttcctccagcaccaggttttgctggtgctaccgagtacatggagcaa
gtcaacatctggaagcagtggattcaatgggaaaaagaagacccgctcgttcttgcggat
gacgaacctgaggtactgaagcagcgcattctctacgtttacaagcaagccctgatggca
ttgcgtttctggcccgagatgtgggtggacgctgccgagtggtgttttgagaacaacatc
ttcaaagacggggtcgatttgggcatcaagtttctcacagacggcattgcggcaaacccc
gagagcgttctactggctctcaaacatggcgaccggatcgaaatgacacttcccgttgcc
gatactgaggaaagcaaggaggagcgagcaaaagcaatccgcgcgccctatgaccaagtc
ttggagacgctctaccatatgatgcaaaagttgaaggaacgcgaaaagaacgagcttgcc
aagatcgaaaaggcagcgacggagcacgctgggcgtaacgacggggacgataatgacgac
caggaccagacacttgccctcgagcagcgaacgcaggctgtcaaacagggcttcagcctt
cagactgagctgctgaagcgtactatttcctttatctggatcgctctttgtcgcgcgatg
cgtcgcacgcagggcaagggatcacagaccaagggccttaggcaggtcttcaccgaagcc
cgtggcaagggtcagctgacaagcgatgtctatgtggctgtcgccttgatagagtccgtg
gtatacaaggatcctgcaggtggtaagatctttgaccgtggcgccaaactgtttcccgag
gatgaaggtttcatgctggagtacatcaagtacttgcacttgaaggatgacacaacgaag
cggtactccgtcgatagcttcgaccctattgcttatcgactgatcatctcacctgccgtc
cagctgcggcccaatctcgtcatgccctcgattgagcaggccacatctgtccgtgacgct
actccgttgccaacagcgagcccagtgcctcagtacctcggtacgacaaattctccaaaa
aggccttatcccggcgacgaccaggaggaatacaaccgcccacgcaagctcgctcgtgga
cagtcgcctctcaagggtgcagcaggtcgccgtcttgaccagcagcgacagaaccagggc
gcaccgcttgctcgagacatcacatttttccttggtatcctaccaccgacgcactcgtac
aatgcccagctcttcagcgccagtggcctcgtgaaccttctgcgggacactcccgtacca
gattacaagtccggtgccacatttgaaggtagttccggagcctaccgccgagatgcgcag
cagcagtttacgcaaccacctccaggccagtggccgccgccgagcgcgccacagtatgaa
ggcagtgccccttcgagctggccgccgccaccgaatggctactctggatatacagccccc
cctacgcagcagtatggacaatatcagtattag
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