KEGG   Verticillium dahliae: VDAG_09973
Entry
VDAG_09973        CDS       T03450                                 
Name
(RefSeq) hypothetical protein
  KO
K14285  NTF2-related export protein 1/2
Organism
vda  Verticillium dahliae
Pathway
vda03008  Ribosome biogenesis in eukaryotes
vda03013  Nucleocytoplasmic transport
vda03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:vda00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    VDAG_09973
   03015 mRNA surveillance pathway
    VDAG_09973
   03008 Ribosome biogenesis in eukaryotes
    VDAG_09973
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:vda03019]
    VDAG_09973
   03009 Ribosome biogenesis [BR:vda03009]
    VDAG_09973
Messenger RNA biogenesis [BR:vda03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     VDAG_09973
Ribosome biogenesis [BR:vda03009]
 Eukaryotic type
  Pre-60S particles
   Export and cytoplasmic maturation factors
    VDAG_09973
SSDB
Motif
Pfam: NTF2 SnoaL_2
Other DBs
NCBI-GeneID: 20711436
NCBI-ProteinID: XP_009654025
UniProt: G2XIJ1
LinkDB
Position
4
AA seq 227 aa
MSLPTREVQIKQASDNAATAVDAATAVDAATAVDAATAVDAARADKPAAKIFVDAYYDAL
NRRKPSAIAAFYTTASTSYASHPPDLSINGLPLTDPAAYARLLDDHYHEAPLPGVPAPKA
SSSSSSSAASTTPLVRLELESFDAHVVNPDYVVAAPPGIADTPDKTGAKCSVLVQVTGRL
YYGRGREAAAKTFNEVFVLVPNWDTFGRNAPKGARRWLISSQNFRSL
NT seq 684 nt   +upstreamnt  +downstreamnt
atgtcgctccccacgcgcgaggtccagatcaagcaggccagcgacaatgctgccacagct
gtagatgctgccacagctgtagatgctgccacagctgtagatgctgccacagctgtagat
gctgccagagctgacaagccagccgccaaaatcttcgtcgacgcctactacgacgccctc
aaccgccgcaagccctccgccatcgccgccttctacacaaccgcctcgacctcctacgcc
tcgcacccgcccgacctctccatcaacggcctgcccctcaccgacccagccgcctacgcc
cgcctcctcgacgaccactaccacgaggcgcccctccccggcgtgccggcccccaaggcc
tcttcctcctcctcctcgtcagccgcctcgacgacgcccctcgtgcgcctcgagctcgag
tcgttcgacgcccacgtcgtcaaccccgactacgtcgtcgccgcgccccccggcatcgcc
gacacgcccgacaagacgggcgccaagtgcagcgtcctcgtccaggtcacgggccgcctc
tactacggacgcggccgcgaggctgccgccaagacgttcaacgaggtctttgtgctcgtg
cccaactgggacacctttggccggaacgcgcccaagggggcccgccgctggctcatttcg
agccagaactttcgctctctgtag

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