Verticillium dahliae: VDAG_10031
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Entry
VDAG_10031 CDS
T03450
Name
(RefSeq) DNA repair helicase RAD3
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
vda
Verticillium dahliae
Pathway
vda03022
Basal transcription factors
vda03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
vda00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
VDAG_10031
09124 Replication and repair
03420 Nucleotide excision repair
VDAG_10031
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vda03021
]
VDAG_10031
03036 Chromosome and associated proteins [BR:
vda03036
]
VDAG_10031
03400 DNA repair and recombination proteins [BR:
vda03400
]
VDAG_10031
Enzymes [BR:
vda01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
VDAG_10031
Transcription machinery [BR:
vda03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
VDAG_10031
Chromosome and associated proteins [BR:
vda03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
VDAG_10031
DNA repair and recombination proteins [BR:
vda03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
VDAG_10031
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HBB
Helicase_C_2
DEAD_2
DEAD
ResIII
AAA_22
nSTAND3
SLFN-g3_helicase
SNF2-rel_dom
GARP
Motif
Other DBs
NCBI-GeneID:
20711494
NCBI-ProteinID:
XP_009654083
UniProt:
G2XIP9
LinkDB
All DBs
Position
4
AA seq
772 aa
AA seq
DB search
MKFFIDDLPVLFPYPRIYPEQYAYMCDLKSRSSMAETSPCQYADTALETLDAGGHCVLEM
PSGTGKTVSLLSLIVAYQQHYPEHRKLIYCSRTMSEIEKALAELRELMKYRTEQLGQEED
LTAGFVKEKKDKGENVDVCVYHDNLDLLEPHNLIPNGVWTFDGLLRYGEQHKQCPYFTSR
RMMQYCNVIIYSYHYLLDPKIAERVSRELSKDCIVVFDEAHNIDNVCIESLSTDITEDSL
RKAARGAQNLDRKIAEMKQTDQEQLQNEYLKLVEGLRDAGEARQEDAFMANPDDLLNEAV
PGNIRRAEHFVAFLKRFIEYLKTRMKVRNTISETPPSFLAHLKEFTFIEKKPLKFCAERL
TSLVRTLELTNIEDYQPLQEVATFATLVATYEKGFLLILEPFESEAAEVPNPVLHFTCLD
AAIAIKPVFDRFSSVIITSGTISPLEMYPKMLGFSTVVQESYSMTLARRSFLPMIVTRGS
DQASVSTSFQVRNEPSVVRNYGSLLTEFAKITPDGMVVFFPSYLYMESIISMWQGMGILD
EVWKYKLILVETPDAQETSLALETYRTACCNGRGAVLLCVARGKVSEGIDFDHQYGRAVL
NIGVPFQYTESRILKARLEFLRETYRIRENDFLSFDAMRHAAQCLGRVLRGKDDYGVMVL
ADRRFQKKRVQLPKWINQGLLDADTNLSTDMAVSSARRFLKQMAQPFRAKDQEGVSTWSY
EDLMRHKEKTELDRIRDLEDAANKNDQTQEFGGDDYGMDDDLDQDLMEIDGF
NT seq
2319 nt
NT seq
+upstream
nt +downstream
nt
atgaagttttttatcgacgacctcccggtcctgttcccgtatccgaggatctatcccgag
caatatgcctacatgtgcgatctcaagagtcggtcttccatggcagaaacctcaccatgt
caatatgctgataccgccctagagaccctagatgcgggggggcactgtgttcttgagatg
ccttcagggactggcaagacggtttccttgctctcgctcatcgtcgcataccagcaacat
tatcctgagcaccggaagctgatatactgctctcgtaccatgtctgaaattgaaaaggct
ctcgctgagttaagggaactcatgaaataccgtactgagcagctcgggcaagaggaagac
ctcactgctggtttcgtgaaggagaagaaggacaaaggggagaacgttgacgtgtgcgta
tatcacgataacctcgatctccttgagcctcacaatctcatcccgaacggagtctggacc
ttcgatggtctccttcgctacggtgaacagcacaaacagtgcccatatttcacctccagg
cgcatgatgcaatactgcaacgtcatcatctattcctaccattatctcctcgaccccaag
attgccgagagagtctcgcgagagctgtccaaagattgcatcgtagttttcgatgaagcg
cataacatcgacaacgtgtgcatcgagtcacttagcacagacatcaccgaggattctctg
cgcaaggcggcgaggggagcgcaaaacctggatcgtaagattgcggagatgaagcagact
gatcaagagcagcttcagaacgaatacctcaagcttgtagagggcctgcgtgatgcagga
gaagctcgccaagaggacgcattcatggccaatccagacgacctactcaacgaagccgtc
cctggaaatattcgtagggcggaacactttgttgcgttcttgaagaggttcatcgagtat
ctgaagactcgcatgaaagtcaggaacaccatctccgaaacacctccgtccttccttgcc
cacctcaaggagttcacctttattgagaaaaagccactgaagttctgtgccgagcgtctc
acgtctttggtcagaacactcgaactcaccaacattgaagattatcagccacttcaagaa
gttgcaacttttgctacgttggttgccacctatgaaaaaggctttctccttattctggag
ccatttgagtcagaagcagccgaggtgccgaatcccgtgctacacttcacctgcctcgac
gcagctatcgctatcaaacccgtgtttgacagattctcttccgtcatcatcacttccggt
accatttctccgttggagatgtaccccaaaatgctgggcttctcgactgttgttcaggag
tcttacagtatgaccctagccagacggtccttcctgcccatgatcgttacaagaggtagc
gatcaagcttcagtctcaaccagctttcaagtcagaaatgagccaagcgttgtccgcaat
tacggcagcctcctgacagaattcgccaaaatcacaccggatggcatggtcgtcttcttc
ccctcctacctgtacatggaatccatcataagcatgtggcagggcatgggtatcctggac
gaggtctggaaatacaaactaatcctcgtcgagacacctgacgcacaagagacctcgctg
gcgctggaaacctacagaaccgcctgctgcaacggccgaggcgctgtacttctttgcgtc
gcccgaggcaaggtgtctgaaggtatagacttcgatcatcagtacggccgggccgtgtta
aacattggtgttccattccaatacaccgagtcccgaatcctcaaagcaaggctcgagttc
ttgcgagaaacataccgcatccgcgagaatgatttcctctccttcgatgccatgcgtcac
gccgcccaatgtttaggccgagtccttcgtggaaaggacgattacggcgtcatggtcctt
gctgatcgtcggttccagaagaagcgcgttcagctacccaaatggatcaaccaggggttg
cttgatgcagacacaaatctcagcacagacatggccgttagtagcgcacgacgctttctc
aagcagatggcgcaaccgttccgagccaaggaccaagaaggcgtcagcacgtggagctac
gaagacctgatgagacacaaggagaagactgaattagatcgaatcagggacctcgaggat
gcggcgaacaaaaatgaccagacacaagaatttggcggcgacgactatggtatggacgat
gacctggaccaggacctcatggagatagacggattctag
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integrated database retrieval system
