Verticillium dahliae: VDAG_10214
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Entry
VDAG_10214 CDS
T03450
Name
(RefSeq) hypothetical protein
KO
K13103
tuftelin-interacting protein 11
Organism
vda
Verticillium dahliae
Brite
KEGG Orthology (KO) [BR:
vda00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
vda03041
]
VDAG_10214
Spliceosome [BR:
vda03041
]
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
VDAG_10214
Other components
Complex C specific factors
VDAG_10214
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GCFC
G-patch
TIP_N
G-patch_2
ATP-synt_E
Motif
Other DBs
NCBI-GeneID:
20711677
NCBI-ProteinID:
XP_009658212
UniProt:
G2XJ82
LinkDB
All DBs
Position
Unknown
AA seq
862 aa
AA seq
DB search
MSAFPTFDPSRLTKKSAAAQYSSDSEEDNDDEFTTPIVDPAAEDDFHNSNPRKRRRVGES
KDRAALGIFASDSEDDGPGKRWKKKTLRGKGMSFVSTGTMANAQDEKEYSDDSDRNGPPA
AEEDDEEDDEEEEEAAGVGLGLRSATSGGLGFAPATKDEDTEMQGQDEAPYKPSFVKTKF
DGRNPLGRGFVPSSARQPVLTNFEDDEKPTKPTIARPSAFAPSRDGKGSTSKPNPKSFGA
RMMAKMGYVEGTGLGKESQGRNVIIEANLRPQGVGLGAVKEKSVSERREEKRQAELRGEV
VVDSDEEEKKKKRERKKRLGASGISSGTSTPRRQKTAFMTAEEIKRAAPGLHIPDAFAPI
LDMTGPGNKLLTSTSGLLTPTSAAAPESAEAIEARKIVRRAHADLAAFSEEWRSLEERKS
WVELELRQHEQETADLAADLERMGVFAGIVTNELPAATEWQDKIRCLQKAIDAVGPPSGE
VTDIAVAAIHPFFRDPDWILLEEPKRFATELNDMRGLLTKSATNEKSIDKMNTTANGLND
TDLYRQHHKATTPYETMMYKLWYPKARGGIRDWDVYDPVPLLAVLEAWNSLLPAFVRAQF
LQDVVRKLETAVSEWNPRKKRQSYKLPHLWLFPWLQYLPSYHLDPKGTGLVADVRRKFRQ
LVDVWEFDRGVVPGLTQWRDVLGSQWQPLIMSHVLPSMGRYLRENFRVDPGDQEPYLPML
MGTLRWSSVLGSKVLAEVIVAEVFPLWHDKLGEWLQLEEVNLEEVYACNDATSGDFLRSI
LLLWRNGVACVQDINPGCGVCRSHILKLQSESWRTNFRLWFDRTVAKACDTLHARTAAIM
DLCISLVLADSDTLSRQSKGYQ
NT seq
2589 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcatttcctacgttcgatccctctcgcctcacgaagaagtctgccgccgcgcaa
tactcgtctgattctgaagaagacaatgacgacgagttcaccactccgattgtcgatccc
gccgctgaagatgacttccacaactcgaatccacggaagcgccgtcgcgtcggcgagtcc
aaggaccgcgcagctttgggtatctttgcctctgacagcgaggatgacggcccaggcaag
cgctggaagaagaagacgcttcgcggaaaaggcatgagtttcgtatctacagggacaatg
gccaacgcccaagacgaaaaagaatactcggacgacagcgaccgaaacggaccaccagca
gccgaggaggatgacgaggaagacgacgaggaagaggaagaggccgctggggttggcctg
ggacttcggtcagcaacgtctggcgggctcggcttcgcaccggcgactaaagacgaagat
acagagatgcaaggccaagatgaagccccatacaagccttccttcgtgaaaacaaagttt
gacggacgcaacccactgggccgtggcttcgtaccatcgtcagcgcgacaacctgtgtta
acgaacttcgaagatgatgagaagccgacgaaaccgaccattgcacggccaagcgctttt
gcgccgtctcgagacggcaagggcagcacaagcaagccgaaccccaaatctttcggagcg
cgcatgatggccaagatgggctacgtcgagggtaccggtcttggtaaagagagccaggga
cgaaacgtcattattgaagccaaccttcgacctcaaggtgtcggtcttggtgcggtcaag
gaaaaatccgtgtctgaacggcgtgaagagaagcggcaggccgagctgcgcggcgaggtc
gtcgtcgactcggacgaagaagagaagaagaagaagcgcgagaggaagaagaggctgggc
gccagtggtatcagcagtggtaccagtactcctcgacgacagaagacggcattcatgacg
gcagaggagatcaagagggcggcgcctggtctacacattcctgatgcttttgcgcccatt
ctcgacatgacaggtccaggcaataaactgctgacatcgacatcgggattgttaacaccc
acatctgctgccgcgcctgagtcggctgaagcgatagaagcacgcaagatagtcaggcga
gcgcatgccgacttggcggctttctcggaggagtggcggagtctcgaggagcggaagagc
tgggtcgagctagagctgcgacagcacgaacaggagacggcagacttggccgctgacctg
gaaagaatgggtgtgtttgccggcatcgtcactaacgagctgccggcggccaccgagtgg
caagacaagatccgatgtcttcaaaaggccattgatgccgttggccctcccagtggcgag
gtcacggatatcgccgtcgcggcgatccacccattcttccgcgacccagactggattctg
ctagaagagccgaaacgctttgctaccgaactcaacgatatgcgtggccttctgaccaag
tctgcaaccaacgagaagagcattgataagatgaacaccacggcgaacgggctcaacgac
acggacctttatcgccaacatcacaaggcgacaacaccctacgagactatgatgtacaag
ctttggtaccccaaggccagggggggcatccgagactgggacgtgtacgaccctgtgccc
ctcctagcggtgctagaggcatggaactctctactgccagctttcgtgcgcgctcagttc
cttcaggacgtggtgcggaagctggagacagccgtcagcgaatggaacccgcgcaagaag
cgccagagctacaagctccctcatctgtggcttttcccctggctgcagtaccttccgtcc
taccatctggatccaaagggcaccggccttgtggccgatgtgcggcgcaaattcaggcaa
cttgttgacgtgtgggaatttgacaggggcgtcgtgcctggtctcacgcagtggcgcgac
gttctgggaagtcagtggcagccgctcatcatgtcacatgttttgccgagcatggggcgc
tacctgcgggagaatttccgcgtcgatcctggagaccaagagccttacctccccatgctc
atggggacgctcaggtggtccagcgtgctgggatccaaggtcctggctgaagtcatcgtg
gccgaggtgttcccgctctggcacgacaagcttggcgagtggcttcagctggaggaggtc
aatcttgaggaagtgtacgcatgcaacgacgccacgtcgggcgactttctgaggtccatt
ctcctcctctggcgcaatggagtggcttgcgttcaggatatcaacccgggttgtggggtc
tgcaggagtcacatcctgaagctccagtctgagagctggcggacaaacttccgattgtgg
ttcgacagaactgtggcgaaagcctgtgacacgctacatgctaggactgctgctatcatg
gatctctgcatcagcttagtcctggcagatagcgatacgctttctaggcaatctaaaggg
tatcaatag
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