Verticillium dahliae: VDAG_10305 Help Entry VDAG_10305        CDS       T03450                                  Name (RefSeq) pre-mRNA-splicing factor spp42   KO K12856   pre-mRNA-processing factor 8 Organism vda  Verticillium dahliae Pathway vda03040   Spliceosome Brite KEGG Orthology (KO) [BR:vda00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     VDAG_10305  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03041 Spliceosome [BR:vda03041]     VDAG_10305 Spliceosome [BR:vda03041]  Complex B   U4/U6.U5 tri-snRNP components    U5 snRNP specific factors     VDAG_10305  Complex C    U5 SnRNP specific factors     VDAG_10305 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  PROCN PRP8_domainIV U6-snRNA_bdg PRO8NT U5_2-snRNA_bdg RRM_4 PROCT Hom_end_hint Hom_end Motif Other DBs NCBI-GeneID:  20711768 NCBI-ProteinID:  XP_009658069 UniProt:  G2XJP2 LinkDB All DBs Position Unknown AA seq 2874 aa AA seqDB search MSSQPPPPPPGWGPPPPPPPPPSSSLPPPPSAPAPPPPGYRPPTDPQIAKFAQKKKEWLR DQRARFGEKRKSGFVETQKADMPPEHLRKIVKDIGDVSQKKYTSDKRSYLGALKFMPHAV LKLLENMPMPWESAREVKVLYHVNGCLTLVNEIPRVIEPVFFAQWAMMWTFMRKEKADRR LFKRMRFPPFDDEEPPLSWSENLEDVEPAEPIQMELNEDEDAAVYEWFYDHRPLLDTPHV NGDSYKSWNLTLPQMATLFRLSRPLISDVVDKNYFYLFDRKSFLTGKALNVALPGGPRFE PLYKDIDPNDEDFGEFNAIDRIIFRNPVRTEFRVAYPYLYNSLPRSVHLAWHSYPQIVFK RSDNPDLPAFHFDHRINPISSRAVAPKNLTISHEDELFGVGNNEEDEDVFELPADVEPFL NEEELFNDDTAAAIELWWAPFPFDRRSGRMVRAQDVPLIKQWYLEHAPTDKPPVKVRVSY QKLLKNFVLNEVHKKKPKSQQQQNLMRSLRQTKFFQQTTIDWVEAGLQVCRQGFNMLNLL IHRKNLTYLHLDYNFNLKPVKTLTTKERKKSRFGNAFHLMREILRLTKLIVDAQVQYRLG NIDPFQLADGILYAFNHVGQLTGMYRYKYKLMHQIRSCKDLKHLIYYRFNSAPVGKGPGC GFWAPAWRVWLFFMRGVIPLLERWLGNLLSRQFEGRHSKGVAKTVTKQRVESHFDLELRA SVMADLMDMMPEGIKQNKVNTVLQHLSEAWRCWKSNIPWKVPGLPAPIENIILRYVKAKA DWWISVAHYNRERIRRGATVDKTVAKKNVGRLTRLWLKAEQERQHNHMKDGPYVSSEEAV AIYTTTVHWLESRKFSPIPFPSVSYKHDTKILILALERLREAYSVKGRLNQSQREELALI EQAYDSPGTTLERIKRFLLTQRAFKEVGIDMNDNYSTINPVYDIEPIEKISDAYLDQYLW YQADQRHLFPAWIKPSDSEVPPLLVYKWAQGINNLDKVWETENGECNVMIETELSKVYDK MELTLLNSLLRLIMDHNLADYITAKNNVQLTYKDMNHVNSYGMIRGLQFSAFVFQYYGLV LDLLLLGPQRASEIAGPPQSPNDFLQFRDKETETRHPIRLYTRYVDKIWVFLRFTAEDSR DLIQRFLTEQPDPNFENVIGFKSKKCWPRDSRMRLMRHDVNLGRAVFWDLKNRLPRSITT IEWDDSFTSVYSRDNPNLLFSMCGFEVRILPKIRNQNDEFPVKDSVWSLVDNTTKERTAH AFLQVTEDDIQKFNNRIRQILMSSGSTTFTKIANKWNTALIALFTYYREAAVSTIELLDT IVKCETKIQTRVKIGLNSKMPSRFPPAVFYTPKELGGLGMISGSHILIPASDKRWSKQTD TGVTHYRSGMTHDEETLIPNIFRYIIPWEAEFIDSQRVWTEYSQKRMEANQQNRRLTLED LEDSWDRGLPRINTLFQKDRSTLSFDKGFRARAEFKIYQLMKNNPFWWTSQRHDGKLWNL NAYRTDVIQALGGVETILEHTLFKATGFPSWEGLFWEKACLAKGTMLLRYDSTKVAVEDV KEGDLLLGPDGGPRRAFNIVSGNDRLYRIQVGGSKEDLVVTPNHILVLHRESPKGNVQVS ATERYDTVEMTATEFASLDPTEQGKHRLFRSPGFELPEQKVPVDPYFLGLWLGDRNRSSD TSYSNHEAEVRQFLVRHASDLDLHLVWHDRLGHTAVCRTRPAEPTLPQVNNAAQPDRKRP ARQTIMKQRLTAGWTVQPHRAPGEARVWTAPQAALCGGNDQRHALDSVSGSELDDVELDL LEIDDEDAETELLDEAQSDDEAPSGQNSDKQLSERKCIRLRMGRASYGDIQEEEQNQLLD DIVDRPPGKSGINTLRHALNELGLLSHGETGPEADRKRIPSEYMQNSRAVRLAVLAGLLD TDGSYVCSENVFGFAQSKRQHSTLFWDAVALARSLGFGVWTKERMAWNLERTAQFPQLFA QISGNLTEIPCLLLRKQTCERFIPQSHSFAIKSISLESEDTEWAGFRVDQDQLYLRHDYL VLHNSGFEESMKFKKLTNAQRSGLNQIPNRRFTLWWSPTINRANVYVGFQVQLDLTGIFL HGKIPTLKISLIQIFRAHLWQKIHESVVMDLCQVFDQELESLGISMVQKETIHPRKSYKM NSSCADILLFANHKWNVTRPSMLFDTKDVIEPTSTNKFWVDVQLRYGDYDSHDIERYTRA KYLDYTTDSASIYPSATGLMIGIDLAYNLYSAYGMYFPGLKVLIQQAMAKVMKANPALYV LRERIRKGLQLYASENTQEFLNSQNYSELFSNQTQLFIDDTNVYRVTIHKTFEGNLTTKP INGAIFIFNPRTGQLFLKIIHTSVWAGQKRLGQLAKWKTAEEVAALIRSLPVEEQPKQLI VTRKGLLDPLEVHLLDFPNISIRASELQLPFQAAMKVEKLGDMILRATEPQMVLFNLYDE WLKSLSSYTAFSRLILILRALHVNPDKTKLILRPDKTVITQDHHIWPTLSDEDWVKVEVQ LRDLILNDYGKKNNVNVSSLTSSEVRDIILGMEISAPSMQRQQAAEIEKQQQEQQQLTAV TTKTQNVHGEELVVTTTSQFEQQTFASKTEWRTRAIATSNLRTKSNNIYVSSVDNDSDDI TYVMPNNILKRFITIADLRVQVAGYLYGTSVPDNDQVKEIKCIVMIPQIGGLRNVQLPQQ LPQHEYLENMEPLGVIHTMSGSELPYMSAMDVTEHAKLLDTHSTWDKNDTITVAVAFTPG SVSLSAWGLTPQGYKWGAENKDLGSDQPQGFTTNMGTKRKLLLSPRFRGFFLVPETGKWN YSFMGSAFAGMEKKPVHVKLDTPLPFYSDQHRPIHFHSFAELEDIWVDRQDNFA NT seq 8625 nt NT seq  +upstreamnt  +downstreamnt atgtcctcacaaccaccaccgcctcctccgggatggggccctccgcctccgccgccgcct cctccttcgtcgtcgctgcctcctcctccatccgcccccgcgccgccaccacctggatac cgtcctccgaccgaccctcaaatcgcaaagtttgcccagaagaagaaggaatggcttcgg gatcaacgcgcccgctttggcgagaagcggaagagcgggtttgtcgagacgcagaaagct gacatgccaccggagcatctacgcaagatcgtcaaagacattggtgatgtgtcgcagaag aagtacaccagcgacaagcgaagctatctcggagctctcaagttcatgcctcacgccgtc ctgaagctgctggagaacatgcccatgccctgggagtcagcgcgcgaagtcaaggttctg tatcacgtcaacggatgcctgaccctcgtcaacgagatccctcgcgtcatcgagcccgtc ttcttcgcgcagtgggccatgatgtggacgttcatgcgaaaggagaaggccgaccgaagg ctgttcaagcgtatgcgcttcccaccatttgatgacgaagagcccccgctgtcgtggtct gagaacctcgaagacgttgagcctgcggagcctatccagatggagctgaacgaggacgaa gacgcagcagtttacgaatggttctacgatcacaggccgctccttgatacaccacatgtc aatggcgacagctacaagtcctggaaccttactcttcctcagatggccacgctcttcaga ctgagtcgacccctcatttcagacgttgtcgacaagaactacttctacctcttcgaccgc aagagtttcctgaccggaaaggcgctcaacgtcgcactaccaggcggaccgcgcttcgag cccctctacaaggacatcgatcccaacgatgaggacttcggagagttcaacgccatcgac cgaatcatcttccgtaatcctgtcaggacagagttccgcgtggcgtatccctatctctac aactctcttccccgaagtgttcatctcgcttggcattcataccctcagatcgtcttcaag cgttccgacaacccagacctgccagctttccacttcgatcacagaatcaatcccatctcg tcccgtgccgtagcaccgaagaacctcaccatcagccacgaggacgagctctttggcgtc ggcaacaacgaggaggacgaggatgtgtttgagctgccagccgacgtcgagccattcttg aatgaagaggaactctttaatgacgacacggctgctgccattgagctgtggtgggcgccg ttcccctttgatcgtcgctccgggcgcatggtccgcgcccaggatgtacctctcatcaag caatggtacctcgaacacgcgccaacggacaagcctcccgtcaaggttcgcgtgtcgtac cagaagctcttgaagaacttcgttctgaacgaggtccacaagaagaagccaaagtcacag cagcaacagaacctgatgcggagtctcaggcagaccaagttcttccagcagaccaccatc gactgggtcgaagccggtttgcaggtctgccgacaaggtttcaacatgctcaatctcttg attcaccgcaagaaccttacctaccttcatctcgactacaacttcaacctgaagcctgtc aagaccctcacaaccaaggagcgaaagaagtctcgcttcggcaacgctttccacctgatg cgtgagatcctgcgtttgaccaagctgatcgtcgatgcccaggttcaataccgcctcggc aacatcgaccctttccaactggctgacggcatcctctatgctttcaaccatgtgggtcag ctaacgggaatgtaccgttacaagtacaagctgatgcaccagattcgttcctgcaaggat ctgaagcatctgatttactaccgcttcaactctgctcccgtcggcaagggccccggctgc ggtttctgggctcccgcctggcgagtttggctgttcttcatgaggggtgtcattccactc ttggagcgatggcttggcaaccttctgtctcgtcagttcgagggccgccacagcaagggt gtcgccaaaaccgtcacgaagcagcgtgtcgagtctcactttgatcttgagcttcgcgct tcggtcatggcggacttgatggacatgatgcccgaaggcatcaagcagaacaaggttaac actgtgctccagcatctttccgaagcgtggaggtgctggaagagtaacattccttggaag gtgcctggcttgccagcgcccattgaaaacatcattctgcgttacgtcaaagccaaggcg gattggtggatctcagttgctcactacaaccgagagcgtattcgacgtggtgcaacggtc gacaagactgtggctaaaaagaacgtcggtcgtttgactcgtctctggctgaaggctgag caggagcgccagcacaaccacatgaaggacggtccttacgtctcttctgaggaggccgtg gctatctacaccaccaccgtgcactggctcgagtcgcgaaagttttctcccattcccttc cccagcgtgtcctacaagcatgacaccaagattctcatcctcgccctagagcgcctccgt gaggcctactctgtcaaggggcgtctgaaccagagccagcgtgaggagttggccctgatc gagcaggcttacgacagccctggcacaactctcgaacgcatcaagcgcttcctcctgaca cagcgtgctttcaaggaggtaggcatcgacatgaacgacaattacagcacaatcaatcct gtgtatgatatcgagcccattgagaagatcagtgatgcctaccttgaccagtatctctgg taccaggctgatcaacgccacctgttccctgcgtggatcaagccttcagattcggaagtg cctcccctcctggtgtacaagtgggcacagggcatcaataacttggacaaggtttgggaa accgaaaacggagagtgcaacgtcatgatcgagaccgagttgtccaaggtgtacgacaaa atggaactaactctgctcaactcactgttgagactgatcatggaccacaacctggcagac tacatcactgccaagaacaacgttcagctgacctacaaggacatgaaccacgtcaacagc tacggtatgatccgtggcttgcagttctcggccttcgttttccagtactacggtctcgtc ctggacctgctgcttcttggcccccaaagagccagcgagattgcgggcccccctcaaagc cccaatgacttcctgcagttccgtgacaaggagacggaaacccgtcacccgattcgtctt tacacccgttatgtcgacaagatctgggtgttcctgcgtttcactgcggaagattcgcgt gacctgatccaacgtttcctcacagaacaacccgacccaaactttgagaatgttatcggc ttcaagagcaagaagtgctggccaagagattctcgcatgaggctgatgaggcacgatgtc aacctgggaagggctgtcttctgggacctcaagaaccgcctcccgcgatccatcaccacc attgagtgggatgacagcttcacgagcgtttacagtcgggataaccccaacctcctcttc tctatgtgcggcttcgaagttcgcattctccccaagattcggaatcagaacgatgagttc ccggtcaaggacagcgtgtggtcgcttgttgacaataccacgaaggagagaacagcacac gctttcctccaggtgactgaagatgacatccagaagttcaacaaccgtattcgtcagatt ctcatgtcttctggttccactacattcaccaagatcgccaacaagtggaacacggccttg atcgctcttttcacctactaccgcgaggctgcagtctccaccattgagctactagacacc attgtcaagtgtgagacgaagattcagactcgtgtcaagattggcctgaattccaagatg ccgtctcgattcccgcctgcggtgttttacactcctaaggaactgggtggtctgggtatg atctctggttctcacattctcatccccgcgagtgacaagcggtggtccaagcaaacggat acaggtgtcacgcactaccgttctggtatgacccatgacgaagagactctcattcccaac attttccgatatattattccttgggaagccgagttcatcgactcgcagcgtgtctggacc gaatactcgcagaagcgcatggaagccaaccaacagaaccgtcgcctgacgctcgaggac ctcgaggacagctgggaccgcggtctgcctcgcatcaacacactcttccagaaagatcgc agcacgcttagctttgacaagggcttccgcgctcgtgctgagttcaagatctaccaactc atgaagaacaacccattctggtggacgagtcaacgtcacgacggcaagctctggaacctc aacgcctaccgcactgacgttatccaagcacttggtggtgtcgagaccattctcgagcac acgcttttcaaagccacgggattcccgtcctgggaaggcctcttctgggagaaggcgtgc ttggccaagggaacaatgctcctgcgatacgacagcaccaaggttgcggttgaagacgtc aaagagggtgacttgctgctgggacctgacggcggcccgcgacgtgccttcaacatcgtc agcggaaacgatcgtctttaccgcatccaagttggcggcagcaaggaagatcttgtcgta acgccaaatcacatcctggtccttcatcgagaaagcccgaagggcaatgtccaggtctcg gccacagagcgctatgatacagttgaaatgaccgctacagagttcgcatctcttgatcct accgaacaaggcaaacaccgactgttcagatcccctgggttcgagctgcccgagcaaaaa gtacccgtcgatccatacttcctgggcctctggctcggcgatagaaaccgatctagcgac acgtcctactccaatcacgaggcggaagtacgccaattccttgttcgtcatgccagtgat ctcgatcttcaccttgtatggcatgatcgacttggccacactgctgtgtgcagaacccga ccagcagagccaacgcttcctcaggtgaacaacgcggcacagcctgatcgcaagcgcccc gccaggcagactattatgaagcaacgactgactgcgggctggactgttcaaccccatcgt gctcccggcgaggctagagtttggaccgcgccccaagctgctctgtgcggtggcaacgac caaaggcacgcattggactctgtttctggcagcgaattggacgacgtcgaactggaccta cttgagatcgacgatgaagacgctgagacagagcttctagacgaagctcagtctgacgat gaagcgccctctggacagaattctgacaaacaactctcggagcgcaagtgcatccgcctt cgcatgggtcgtgcttcttacggcgacatccaagaagaggaacagaaccagctactcgat gatattgtggatagacccccaggcaagtctggtattaacacacttcgtcatgccctcaac gagcttgggctactctctcacggcgagactggacccgaggctgatcgcaagcgaattccc tctgaatacatgcagaactcgcgagcggttcgcctggctgttcttgcaggccttctcgat acagatggcagctacgtttgctcggagaacgtattcggcttcgctcagagcaagcgtcag cactctactctgttctgggatgctgtcgccctggctcgctctctgggctttggtgtatgg accaaggaacgcatggcgtggaacctggaacgcactgctcagttccctcagctctttgct cagatctctggaaacctgactgagattccctgcctactcctgcggaagcaaacctgcgag cgcttcatcccgcagagccatagcttcgccatcaagtcaatctctctggaatccgaggat acggaatgggcagggttcagagtcgatcaagatcagctctacttgcggcacgattacttg gttctccacaacagtggttttgaagagtccatgaagttcaagaaactcacgaacgcgcag cgttccggtttgaaccagatcccgaaccgtcgcttcactctttggtggtcacccacgatc aaccgcgccaacgtttacgtgggtttccaggtccaacttgatttgactggtatcttcttg cacggcaagattcctactcttaagatctcgctgattcagatcttccgtgcccatctgtgg caaaagattcacgaatctgtggtgatggacttgtgtcaagtctttgaccaggagctcgag tcccttggtatcagcatggtgcagaaagagacgatccatccccgtaaatcatacaagatg aacagctcttgcgccgatattctgctcttcgccaaccacaagtggaatgtcaccaggccg tcaatgctgtttgacaccaaggacgtcattgagccgacaagtacgaacaagttctgggtc gacgttcaacttcgctatggcgactacgactcacacgacattgagcgttacacacgtgcg aagtatctcgactacacgaccgatagcgcgagtatttacccgtctgccaccggtctaatg attggcattgatctcgcatacaacctgtactccgcttatggcatgtacttccccggtctc aaggtacttattcagcaggccatggccaaggtcatgaaggccaaccctgccttgtatgtt cttcgcgagcgtatcagaaagggtctgcagctctacgcttcggagaacacccaggagttc ctaaattcgcagaactattctgaactcttcagcaaccagactcagctgttcattgatgac accaacgtctaccgtgttacaattcacaagacattcgaaggcaacttgacgacaaaacca atcaacggagccatcttcatcttcaaccctcgcaccggtcagctcttcctcaagatcatt cacacaagcgtctgggcaggccagaagcgtctcggtcagctcgcaaagtggaagactgcc gaggaagttgcagccctgatccgctccctgcccgtggaggaacagccgaagcagctgatt gtcacccgcaagggtctccttgaccctctcgaggtccatctgctcgacttccccaacatt tccattcgcgcctccgagctgcaacttccgttccaggctgcgatgaaggttgagaagctg ggtgacatgattcttcgtgctaccgagccgcagatggttttgttcaacctttatgacgag tggctcaagtctctttcgtcatacacggcattctcgcgtctgattctcattcttcgagct ctgcacgttaatcccgacaagaccaagctcattcttcgacctgacaagacggtcatcaca caagaccaccatatttggcccacactgtcggacgaagactgggtcaaggtcgaagtgcag cttcgcgacctcatcctgaatgactacggaaagaagaacaatgtcaacgtgtcgagtctg accagcagcgaggttcgcgacattattctcggcatggagatctcggcgccctcgatgcag aggcagcaggctgcggagattgagaagcagcagcaggaacagcagcagctgaccgctgtc acgaccaagacacagaacgtgcacggcgaggagctcgtcgtgacgacgacgtctcagttc gagcagcagactttcgcctccaagacggaatggagaactcgcgcgattgccacgtccaac ctacgcaccaagtcgaacaatatctacgtctcctccgtggacaatgactcggatgacatc acctatgtaatgcccaacaacattctcaagcggttcatcaccattgccgatcttcgcgtt caggtcgccggctatctgtacggaacctctgttcccgacaacgaccaagtcaaggagatt aagtgcatcgtcatgatcccccagatcggcggtctccgcaacgtgcagctcccccagcag ctgccgcagcacgagtacctcgagaacatggaacccctcggcgtcatccacaccatgtcc ggctcggagctgccgtacatgtcggccatggatgttaccgaacacgccaagctgcttgac acacactcgacctgggacaagaacgacaccatcactgtcgccgtcgccttcacgcccggc tccgtctcgctctcggcctggggtctcacgccgcagggctacaagtggggcgccgagaac aaggacctcggaagcgaccagccgcagggcttcacgacgaacatgggcaccaagcgcaag ctgctcctcagcccccgtttccgcggcttcttcctcgtgccggagacgggcaagtggaac tacagcttcatgggcagcgcctttgcgggcatggagaagaagcccgtgcacgtcaagctc gacacgccgctgccgttctacagcgaccagcaccgtcccatccacttccacagcttcgcc gagctggaggacatttgggtggaccgacaggacaactttgcgtaa

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