Verticillium dahliae: VDAG_10309
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Entry
VDAG_10309 CDS
T03450
Name
(RefSeq) DNA repair and recombination protein RAD26
KO
K10841
DNA excision repair protein ERCC-6
Organism
vda
Verticillium dahliae
Pathway
vda03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
vda00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
VDAG_10309
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
vda03036
]
VDAG_10309
03400 DNA repair and recombination proteins [BR:
vda03400
]
VDAG_10309
Chromosome and associated proteins [BR:
vda03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
VDAG_10309
DNA repair and recombination proteins [BR:
vda03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
VDAG_10309
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
HDA2-3
DEAD
TFIIE_beta
Motif
Other DBs
NCBI-GeneID:
20711772
NCBI-ProteinID:
XP_009658073
UniProt:
G2XJP6
LinkDB
All DBs
Position
Unknown
AA seq
1116 aa
AA seq
DB search
MASDDTLDEEAALRNLTADVRDQEDLERDIGLQANAAIKEQQDKNDQAKIDKLEASKTRL
EAQRRKEREKLEANRNNVFQSRNIQKTLDKLELEIRQIDGDVADFKARLERRQEEVAAAE
QEVAQGKSLKLPNESRRDYLVRTGKITPFASIGGPRPEGFEGDFADTLLEAEDEAKEEAL
AANDKEPTSHQILRRPGFADAAPAPAAVETEFSLRPRKKRKVKQAGSDDDFDPASAATSD
APSPESAAAYTSEDDTSSRNLKRTTKARGKKTAATTENDDLSSIDDGNERSYQQRLADWT
ERRSEARKQRRLEAGDTSVEPSGPEWSKPSPDEEDYVINDDLRLPGDIHPSLFSYQKTGV
QWLAELYSQNVGGIVGDEMGLGKTVQAIAFIAALHYSKKLTKPVIIVAPATVLRQWVNEF
HRWWPALRVSILHSSGSGMINLREDDTDEETHNGRRDKSVRKIVDRVVKHGHVLVTTYNG
LQTYQDELLHVEWDYAVLDEGHKIRNPNAEITVLCKELRTPNRIILSGTPVQNNLSELWS
LFDFIYPMRLGTLVTFRTQFEVPIKQGGYAGATNLQILTAEKCAETLKEAISQYLLQRLK
IDVAADLPSKTERVLFCKMTDRQLEAYKQFLNSDAVNQILSARRKSLYGIDILRKICNHP
DLIDPHLQNKAGYDWGDPEKSGKMLVVRNLLQIWKKLGHKTLLFSQSKMMLNVIEKFLGG
LETVKYVRMDGETSIEKRQSLIDRFNTDPEIDIFLLTTRTGGLGVNLTGANRIIIFDPDW
NPSTDMQARERAWRLGQTRSVEIYRLMTAGTIEEKIYHRQIFKQFMTNKVLKDPKQRAAF
DLSDLYDLFTFGNSQDSKGNIDRSSILKDAQVKFDGTTPPKENAPASLVPISSVSSESRP
QTGCEETRQVQNIDGVQGMEETNNPEEVEDEKRMVEGIFARNVESAYEHDKVMNGKKTVQ
ADRGMITQEANAVAATAAASLRRAHVQARTITPGTVTWTGEVGEAGRPGAHNRRRGAAPS
SAGIMSRLAARQGMGASPSPVGQKVQTVDFGPKIIEFIKRHSGTVPTKSIVDHFNHEVKG
KAQVKERFMEALERVAKINKSGGAGRSTWSLRPAYK
NT seq
3351 nt
NT seq
+upstream
nt +downstream
nt
atggcttccgacgacacactggatgaggaggctgccctccgcaaccttaccgccgatgtt
cgagatcaagaagatctcgaaagagacatcggacttcaggccaatgcagccatcaaggag
caacaggataagaacgaccaggccaaaatcgacaagctcgaagctagcaagacgagactt
gaggcccaacgaaggaaggaacgtgagaagcttgaagccaaccgcaataacgtcttccag
tcacgcaatatccagaagaccctcgacaagctcgagctggagatcaggcaaattgacggt
gacgtggctgattttaaggctcgtctggagcgccgccaggaagaggtggccgccgccgaa
caggaagttgcgcagggaaagtcgctgaagctgcctaatgagagccgccgcgactacttg
gtgcggaccggaaagatcacgccatttgcctccattggcggccctcgccctgaagggttt
gaaggcgactttgccgacacgctgctggaagccgaggacgaggccaaggaagaggctttg
gcagccaacgacaaggaacccacctcccatcagattctccgtcgccctgggtttgcggat
gccgcacccgcacctgccgccgtggaaaccgaattcagtttacgtccccgcaagaagagg
aaggtcaagcaagctggttctgacgatgattttgaccctgcttcggctgccacatcggat
gcgccgtcgccagaatccgctgcagcctacacctcagaggatgatacgagttcacgcaac
ctcaagcgaacgaccaaggccagaggcaagaagactgcagccacaacggaaaacgacgat
ctgagcagcattgacgatggaaacgagcgttcgtaccaacagcgtctggcagactggacc
gagaggcggagcgaagctcggaaacagcgacgattagaagctggcgatacgtcagtggaa
cccagtggcccggaatggtccaagccttcgccagacgaggaggactatgtgatcaatgat
gatctcaggcttcctggcgacatacatccctctctgttttcgtaccaaaaaactggtgtt
cagtggttggccgaattatattcgcaaaacgttgggggtatcgtcggtgacgagatggga
cttggcaagacagtacaagccattgccttcattgcggccttgcattacagcaagaagctt
accaaacccgtcatcattgttgctcccgccacagttttgcgtcaatgggtgaacgaattc
caccgctggtggccggctctacgtgtttccatcctacactcgtcaggaagcggcatgata
aacctgcgcgaggatgacacagacgaggaaacacacaacgggaggcgtgacaagtctgtc
cgtaaaatagttgatagagtggtcaagcatggacacgtgctagtgactacctacaacggt
ctccagacataccaagacgagctgctccatgtggagtgggattatgcagtactcgatgaa
ggccacaagatccgcaatcccaacgccgagatcacagtcctgtgcaaggagctgcggacc
cccaaccgaatcatcctctctggcacacctgtgcaaaataatctttcggaactctggtcg
cttttcgatttcatctaccctatgcgattgggcactctggttacgttccgcacccagttt
gaggtgcccatcaagcagggcggttatgctggtgctacaaatctgcaaatcctgacagct
gagaaatgtgccgagactctcaaagaagccatcagccaatacctcctgcagcggctcaaa
attgacgttgccgccgaccttccctccaagacagaacgggtcctgttctgcaagatgaca
gataggcagctcgaagcttacaaacagtttctgaattctgatgcggtcaaccagattcta
agcgcccgacggaaatccctttatggtattgacattctgcgcaaaatctgcaatcaccct
gaccttatcgaccctcaccttcaaaacaaggcaggctacgattggggagaccctgagaaa
tcagggaagatgttagttgtgcggaatctcctccaaatctggaaaaagcttggccacaag
acactgctcttctcacagagcaaaatgatgctgaatgtcatcgagaaatttctgggtggt
cttgagacagtcaagtacgttcgcatggacggcgaaacctccatcgagaagaggcagagt
ctcattgatcggttcaacacggatcccgagattgacatctttctcctgacaacccgtacg
ggtggtcttggagtcaacctgacgggtgcaaaccgaatcatcatttttgatcctgactgg
aacccttccacagacatgcaggctcgtgagagagcatggcgtcttgggcagactcgatct
gttgaaatctaccgtctcatgactgctggcactattgaagagaagatctatcatcgccaa
atcttcaagcagttcatgacaaacaaggtattgaaagaccctaaacagcgagctgctttc
gatctatcggatctttacgacctcttcacattcggcaattctcaagacagcaagggcaat
atcgaccggagcagtattctcaaagatgcccaagtcaaattcgacggaaccacacctccc
aaagagaatgctcctgccagtctagtgccaatctcatccgtgagcagtgaaagcagaccc
cagactggctgcgaggaaacgcgtcaagttcagaatatcgatggcgtacaaggcatggaa
gagacaaacaacccagaggaggttgaggacgagaagcgcatggtagaaggcatctttgct
cgcaatgtcgagagcgcttatgaacacgacaaggtcatgaatggcaagaagacagtgcag
gccgatcgcggaatgatcacgcaagaggcaaatgccgtcgcagccacagccgcagcgagt
ttacgccgagcgcatgtccaggcgcgcaccattaccccgggaacagtaacttggaccggc
gaagttggcgaagcgggacgtcctggtgcacacaaccgccgtcgcggcgcagcaccgagc
agtgctggcataatgagtcgtcttgctgcccggcaaggtatgggcgcatcgccttcacct
gtcggacagaaagtgcagaccgtagattttgggcccaaaatcattgagttcatcaagcgg
cacagtggcacggtacctacgaagtcgatagtggatcacttcaaccacgaggtaaagggc
aaggcgcaggtgaaggagcgattcatggaggccttggagagggtcgctaagatcaacaag
tccggaggcgctggtcgtagcacatggtctttgcggccggcttacaaatga
DBGET
integrated database retrieval system
