Verticillium dahliae: VDAG_10422 Help Entry VDAG_10422        CDS       T03450                                  Name (RefSeq) pre-mRNA-splicing factor SYF1   KO K12867   pre-mRNA-splicing factor SYF1 Organism vda  Verticillium dahliae Pathway vda03040   Spliceosome Brite KEGG Orthology (KO) [BR:vda00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     VDAG_10422  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:vda03019]     VDAG_10422    03041 Spliceosome [BR:vda03041]     VDAG_10422 Messenger RNA biogenesis [BR:vda03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     Other transport factors      VDAG_10422 Spliceosome [BR:vda03041]  Complex B   Other components    Prp19-related factors     VDAG_10422  Complex C     VDAG_10422 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  HAT_Syf1_CNRKL1_C HAT_Syf1_M HAT_Syf1_CNRKL1_N HAT_PRP39_N HAT_PRP39_C TPR_14 Suf Mad3_BUB1_I TPR_15 NRDE-2 Motif Other DBs NCBI-GeneID:  20711885 NCBI-ProteinID:  XP_009657979 UniProt:  G2XJU0 LinkDB All DBs Position Unknown AA seq 822 aa AA seqDB search MPALTVINGGRVRSDMNLVADEDSVYEQDILRNSGSTKPWLAYIQFKLQHGTIHEQAFVF ERACLQLPRSYKLWKMYLEFRVKHVSRLNAAIFAAEYRKVNALFERSLILLNKMPRVWEL YLKFLLRQPLVSNTRRAFDRALRALPVTQHSRIWRLYRPFANSLSGISAVKIWRRYIQIH PEDTEDFIELLVQVGLYTEAVKKYINILNNTRFISKHGKGHFELWSEMVDLIVDHATEIL TGHETGIDVERIIRSGIARYADQRGKLWCGLATYWIRRGSFERTRDVFEEGIVTVMTVRD FTMIFDSYIEFEESVIGALMEVASNRAAKGVVDEDADFELDIRMLRFEQLMDRRPFLLND VLLRQNPNNVLEWEKRIALWGDNKQEVVQTYTAAIAAIQPKKAVGSFYQLWAGYAKFYER GGDMRNARIIAEKAVKVPFRSVAELADMWIEWAEMELRNDNFDDAVRIMAKAVQAPKRSA VDYFDETLSPQQRVHKSWKLWSFYVDLVESVGSLDDTKKVYERIFELRIATPQTVVNYAN LLEEHEYYEESFKIYERGLDLFSYPVAFELWNMYLTKAVDRKIGIERLRDLFEQAVEDCP PKFAKTIYLMYGNLEEERGLARHAMRIYERATRAVADEDRAGMFNFYITKSASNFGLPST RPIYERAISSLPDTEARDMCMKFADMEKRLGEIDRARAIYGHASQFCDPRTSPEFWTKWE SFEVQHGNEDTFKEMLRIKRSVQAQFNTDVSFIASQALARSQRRPEDAADADAADAMVAL ERQARAPAGFVAATDGPTVSGADDDDTAAANPDAIDIDDADE NT seq 2469 nt NT seq  +upstreamnt  +downstreamnt atgccggcgctcacggtcatcaacggtggtcgcgtccgctctgacatgaaccttgtagca gacgaggactcagtttacgaacaggacatactccgaaacagtgggagcactaagccatgg ctggcatacatccaattcaagctgcaacatggcacgattcatgaacaagccttcgtcttt gaaagagcctgcctgcagctcccgaggtcctataagttatggaagatgtatctcgagttc cgcgtcaaacacgtcagtcgtttgaatgccgctattttcgctgccgaatatcgcaaggtt aacgcccttttcgaacgctctttgatcttactcaacaagatgcctcgtgtatgggagctt tatctcaagtttctgcttcgacaacccttggtgtcaaacactcgacgtgcgttcgaccgt gcattacgcgcgctacctgtcacccaacactcgcgcatctggagactttacaggcctttt gccaactcactctcaggcatcagcgcagtaaagatctggcggcggtacatacagatccat cctgaagatactgaagacttcatcgaactattggttcaggttggcctctacaccgaagct gtcaagaaatacatcaacatcttgaacaacactcgcttcatcagcaagcatggcaaaggc catttcgaactttggagtgaaatggtggacctaatcgttgaccatgctactgagatactt acgggtcatgaaaccggtatcgatgttgagcgcatcatcagaagcggcatcgcacggtac gctgatcaacgaggcaagctttggtgtggtttggccacgtattggatcagacgtggaagc ttcgagcgcacaagggacgtatttgaagaaggtatcgtaacagtcatgactgttcgggat ttcaccatgatcttcgactcatacatcgagttcgaagagtcggttatcggggcgttgatg gaggttgcctccaatcgagctgcgaaaggcgttgtggatgaggatgcggactttgaactt gatattcggatgttaagatttgaacagctcatggaccgcaggccgtttctactaaacgac gtacttctccgccaaaatccgaacaatgtcctcgagtgggagaagcgaatcgcactctgg ggtgacaataagcaggaagttgtccagacatacaccgccgctattgctgccatacaaccg aaaaaggcagttggctcgttttatcagctctgggctggctacgccaaattctatgagcgc ggtggcgacatgcgcaacgcccgcatcattgcagagaaggcggtcaaggtgcctttccga tctgtcgcggagcttgccgatatgtggattgaatgggctgagatggagctgcggaacgac aactttgatgacgcagtccgcatcatggcgaaagctgttcaggcgcctaaacggtcggct gtcgattactttgacgaaacgctgtcgcctcaacagcgtgtacacaagagctggaagctg tggagcttctatgtcgatcttgttgaaagcgttggctcgttggacgatacaaaaaaggtt tacgaaagaatctttgagttgcgcatcgcaactccccaaactgtcgttaattacgcaaac ctcttggaggagcacgaatactacgaagaatcgttcaagatctatgaacgcgggctggac ctcttcagctacccggttgctttcgagctctggaatatgtatcttaccaaggctgtcgac cgtaagattggcattgagcgtcttcgtgacctcttcgaacaggccgttgaggattgtcca ccgaagtttgccaagacgatttatctcatgtacggcaacttggaggaggagcggggtctt gcaagacatgccatgcgcatatacgaacgagccacacgggctgttgccgatgaagaccgc gccggaatgttcaacttctacattaccaaatcggcctccaacttcggcttgccatcaact cgtcctatttacgaaagggccatatcatcgttgccagacacggaagcacgagatatgtgc atgaaatttgcagatatggaaaagcgactcggagaaattgatcgagcaagggcaatttat ggtcacgcatcgcaattctgtgaccctcgcacaagcccagaattctggaccaagtgggag tcgtttgaggtccagcatggcaacgaggacacgttcaaggagatgcttcgtatcaagagg agcgtgcaggctcagttcaatacagacgtcagcttcattgcgtcacaggccctagctcgc agccagcgaagaccggaggacgctgcagacgcagatgcggccgatgcaatggttgcattg gaacgccaggctagggcgcctgcaggctttgtagctgctaccgatggtcctacagtttct ggggctgatgacgacgacactgcagcagccaaccccgatgccatcgatattgatgatgcg gacgagtga

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