Verticillium dahliae: VDAG_10443
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Entry
VDAG_10443 CDS
T03450
Name
(RefSeq) rhamnogalacturonan lyase
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
vda
Verticillium dahliae
Brite
KEGG Orthology (KO) [BR:
vda00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
VDAG_10443
Enzymes [BR:
vda01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
VDAG_10443
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SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
fn3_3
CBM-like
RhgB_N
CarboxypepD_reg
Motif
Other DBs
NCBI-GeneID:
20711906
NCBI-ProteinID:
XP_009658000
UniProt:
G2XJW1
LinkDB
All DBs
Position
Unknown
AA seq
654 aa
AA seq
DB search
MAGMAQMVAAVLQTTETSNSYIIANDRLNATVTKTGGIIVDLTLDGQDLLGPATGSIGRG
PYLDCYCTPAGFWTPGRDRPTLALYSGEDATGTKYGGFKMSDTFPATGQVLEQYIFLREG
ETGLHMFSRVAYHNETTPFLRNLQELRTLFRPNTEMWTHLLTNPEQYGPLPSKDGVAKQV
VVQDATWDLSATPNDPYVKEFSEYFTKYTFQSTWENHKAHGMFADGSKTADGSTFGAWMV
MNTRDTLFGGPLFSDLTVDGIVYNYISSNHHGNQTPNITSGFDRTFGPYYYHFNKGPAGT
DIKELHADAAQYADPEWNSEFYDAIAPLVPNYVTTKGRTTWKLHVDLPKGAKKPIAVLSQ
NGVYFQDNVFDTKAYQYWTEVSESGDATIPMVKAGTYRLTIYAEGIFGQYIKDDVKIEVG
GRIRTTHARWREENAGTEIFRIGTPDRSSGEYRHGFEKDLSKPRQPAEHLIYWAAYDFPS
EFPDGVRYKVGESDPAKDLNYVHWSVFGGRGNSVRKDMYLGDGNVNNWTIVFDLEEAQVR
RKREATFTVQLAGAKTAAGNTDVFNASEPHANLAYTVNVNGQDLKPWVIPSSCAVRSAVV
CYQVGNKFSFHPSMLKAGENEIVLSLPYGATNYEPALLTQALYVQYDALRLEIR
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atggctggcatggcccagatggttgccgctgtcctccaaacgacagagacgtccaactcc
tacatcatcgccaacgaccgtctcaatgccacggtcaccaagactggcggtatcattgtc
gatctgacgctcgacggccaagacctcctcggtcccgccaccggcagcatcggtcgaggc
ccctacctcgactgttactgcacacccgcgggtttctggacccctggtcgtgatcgacct
acgctggccctctactctggcgaggatgccacgggaaccaagtacggcggcttcaagatg
tccgacaccttccccgccaccggccaggtcctcgagcaatacattttcctgcgcgagggg
gagaccggtcttcacatgttcagccgcgtcgcctaccacaacgagacgacgcccttcctg
cgcaacctgcaggagcttcgcaccctgttccgtcccaacacggagatgtggactcatctt
ctcacgaaccctgaacaatacggccccctgcccagcaaggacggtgtcgccaagcaggtt
gtcgttcaggacgctacctgggacctcagcgcgactcccaacgacccttacgtcaaggag
ttctccgaatacttcaccaagtacaccttccagtccacctgggagaaccacaaggcccac
ggcatgttcgccgatggcagcaagaccgctgacggctctacctttggtgcctggatggtc
atgaacaccagggacaccctgttcggcggccctctcttctccgacctcaccgtggacggt
attgtctacaactacatctcctccaaccaccacggcaaccaaacccccaacatcacctct
ggcttcgaccgcacctttggcccttactactaccacttcaacaagggacctgccggcacc
gacatcaaggagctgcacgccgatgccgcccagtacgccgatcccgagtggaactctgag
ttctacgacgccatcgcccccctcgtccccaactatgtgactaccaagggccgcacgact
tggaagctgcacgttgatcttcccaagggcgccaagaagcccatcgctgtcctctctcag
aacggcgtgtacttccaggataacgttttcgacaccaaggcctaccagtactggactgag
gttagcgagtcgggtgatgccaccattcccatggtcaaggccggaacctaccgtctcacc
atttacgccgagggcatcttcggtcagtacatcaaggacgatgtcaagatcgaggtcggt
ggccgcatccgaaccacccacgcacgctggcgcgaggagaacgccggtactgagatcttc
cgcattggtacccctgacaggagctctggcgagtaccgccacggcttcgagaaggacctg
tccaagccgaggcagcctgctgagcacctcatctactgggccgcttacgacttcccctcc
gagttccctgatggtgtcaggtacaaggttggcgagagcgaccccgccaaggacctcaac
tacgtccactggagcgttttcggaggccgtggcaactcggttcgcaaggacatgtacctg
ggagacggcaacgtcaacaactggaccattgtcttcgatctcgaggaggcgcaggtcagg
cgcaagagggaggccaccttcaccgtgcagctcgccggcgccaagaccgctgcgggtaac
actgatgtcttcaacgccagcgagcctcacgccaacctggcttacacggtcaacgtgaac
ggccaggacctgaagccctgggtcatccccagctcttgcgctgtccgctctgccgtcgtc
tgctaccaggtcggcaacaagttcagcttccaccccagcatgctcaaggctggcgagaac
gagatcgtcctcagcttgccctacggtgccaccaactacgagcccgctctcctgacgcag
gctctctacgtgcagtacgacgcgctgcgcctggagattcggtaa
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