Vibrio diabolicus: AL552_00985
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Entry
AL552_00985 CDS
T05332
Name
(GenBank) formate dehydrogenase subunit alpha
KO
K00123
formate dehydrogenase major subunit [EC:
1.17.1.9
]
Organism
vdb
Vibrio diabolicus
Pathway
vdb00630
Glyoxylate and dicarboxylate metabolism
vdb00680
Methane metabolism
vdb01100
Metabolic pathways
vdb01120
Microbial metabolism in diverse environments
vdb01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
vdb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
AL552_00985
09102 Energy metabolism
00680 Methane metabolism
AL552_00985
Enzymes [BR:
vdb01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.9 formate dehydrogenase
AL552_00985
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Molybdopterin
Pyr_redox_2
Molydop_binding
Fer4_20
Molybdop_Fe4S4
Pyr_redox
Pyr_redox_3
Fer2_4
NAD_binding_8
Fer4
Fer4_7
Fer4_9
Fer4_6
DAO
Fer4_8
FAD_oxidored
Fer4_16
FAD_binding_2
Fer4_2
NAD_binding_7
Thi4
HI0933_like
Fer4_10
FAD_binding_3
Fer4_18
Fer4_21
Amino_oxidase
Fer4_22
Fer4_4
Fer4_15
AlaDh_PNT_C
Fer4_3
Fer4_Nqo3
Fer4_17
2-Hacid_dh_C
Motif
Other DBs
NCBI-ProteinID:
AVF92444
LinkDB
All DBs
Position
2:complement(199517..203785)
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AA seq
1422 aa
AA seq
DB search
MIEIVIDGKYRIVEEGLTLLEAAKVCGVEIPSLCGMNKSNEKIPCDLCVVEVESGGTKRA
CDLKVYRGLNVVTQSEQLSEHRRKALNRIMTDHYADCEAPCKTACPAGVDIQSYLYHISQ
NDHQKAIEVIKRTLPMPLSIGRVCPAFCESECRRSLVDEPIAIRQLKRHAADADLAAHEA
YVPEKKPAKHRKIAVVGSGPGGLTAGYYLSNEGYDVTVFESMPKAGGWLRYGIPEYRLPK
DILDKEIELMCRNGMQVETNKKLGVDFTLSQLSEGYDAVCLAVGASQAVEMKYPGSELDG
CYLGVDYLKDYVTEQNYVTGKKVAVIGGGNTAIDCARTARRAGADTTLIYRRTRDEMPAE
DYEIVEAEHEGVKFHFLTNPAQNIADENGRVKAIRLERMALGEPDSSGRRSPKPTGEFFT
EAFDTVIAAVSQKPDLSFLENDELSIPLTRWNTSESDAQTMHTGTGNIFSIGDFRRGPAT
AVEAVGDGRVAAKAIDLFLNGDMADMPKPAFNSRKEKKLAQVDPLHFENIQKVARSIMPE
LTPAQREQSFAEVELGFDNDEAMKEAARCLECGCQANTDCALRDYSTEYHAEQHFDVSVD
VSSASVIGHQDWLDLRAKDLRHKYEVDRSSEFIEFDANRCISCGQCIQACREQAVHGVLS
FVSDKNGRPALRPDDRPRFRSDEKGASCSGLTLMGDSKCVQCGACVQACPTGAMVDSRDR
SQGRTEQLKAVDTICTYCGVGCKLTMFVDERQNKIRYVKGADSPVNQGMLCVKGRFGFDF
ISSEERLTTPLIRKDGWLQPATWDEAIQLVASKLSTIKQDFGSNALAGFSSAKTTNEDNY
AFQKFIRRELGTNNVDHCARLCHASSVTGLEASLGSGAMTNDIPSIKHSDVIFIIGSDTT
SAHPIIASHIKQAIRHHGARLIVADPKRVDMAEHAELYLAHRPGTDVMLLNGVMQQIIKN
GWYDQEYIEERVDGFDTLLQEVMSPAYNLDKVELVTGVKADDIFAMARMIGTAKRTAVYY
SMGITQHTTGHDNVRSIANLQLLCGNIGIEGGGINPLRGQSNVQGACDMGALPNCYPGYQ
KVYNPIVRQKFAIEWDAPNLPSEQGLTLTEIIDAACKREVRGMYIMGENPVLSDPNQAHV
IEGLEALDFLVVQDIFLTETAQYADVVLPSCSFAEKSGHFTNTERRVQRVNAAVKAPGEA
KEDWWIIQAIANAMGSDWHYQCVSEITSEIARVTPQYAGLRWDAITPNGVQWPSNKNNPN
GTRIMHQTQFTRGKGQMVGVPFRYAAELPDEEYPLVLTTGRVLEQFHTGTMTRKTKGLDN
LAGPRAMISVEDAEAIGIHNGQRLKVSTRRGSIEIDAFVTKRMQKGVVFIPFHFVESPVN
RLTTTATDPHAKIPEFKVAAVKIEISETAAQPEPVEEAVHYV
NT seq
4269 nt
NT seq
+upstream
nt +downstream
nt
atgatagaaattgtcatcgatggaaaatatagaattgtagaagaggggctaacccttctg
gaagcagccaaagtgtgcggggtcgaaatcccttcactgtgcggaatgaacaaaagtaac
gagaaaattccgtgtgatttgtgtgtggtcgaagtggaaagtggcggaactaagcgcgcc
tgtgatctcaaagtgtaccgcggtctcaatgtcgtcacacaatcagaacaacttagtgag
caccgcagaaaagcgctcaaccgaatcatgacggaccactacgcagactgtgaagctcca
tgcaaaacggcgtgtcctgctggggtagacatccaatcttatctctaccatatctcgcaa
aacgatcatcaaaaagcgattgaagttattaaacgcacactaccaatgccgttatcgatt
gggcgtgtgtgtccggcattctgcgaaagtgagtgtcgccgttctttggtggatgagccg
attgccattcgccaactcaaacgccatgccgcagacgcagatttagcggcgcatgaagcg
tatgtcccagagaaaaaaccagcgaagcatcgcaagatcgccgttgttggtagtggcccc
ggtggcttaacggcaggttattacttgtcgaatgaaggttatgacgtcaccgtatttgag
tccatgccaaaagcaggcggttggctacgctatggcattcctgaatatcgcctacctaaa
gacattctagacaaagaaatcgaactgatgtgccgcaacggcatgcaagttgaaaccaac
aaaaagcttggtgttgatttcacgctgtctcaattgagtgaaggctacgatgctgtctgt
ttggcagtgggggcgtctcaagcggtagaaatgaagtatcctggtagcgagttggacggt
tgctacctcggtgttgattacctgaaagattacgttacagagcaaaactacgttacgggc
aaaaaagttgccgtgattggtggtggtaacactgcgatcgactgtgcgcgtacggcgcgt
cgtgcgggtgccgataccactttgatctatcgtcgaactcgcgacgaaatgccagccgaa
gactacgaaatcgtcgaagctgaacatgagggtgtgaagttccatttcttaacgaatccg
gcgcaaaacatcgcggatgaaaacggccgcgtgaaggcaattcgattagaacgaatggcg
ttaggtgagccagattcgtctggtcgtcgtagtccgaaaccaacgggtgagttctttact
gaagcatttgataccgtgattgcagcggtatcgcaaaagccggatctcagcttcttagaa
aacgatgagctctccattcctctaacgcgttggaacacatctgaatccgatgctcaaacc
atgcacacgggtacgggcaatatcttcagtatcggtgattttcgtcgtggtcctgcaaca
gcggttgaagcggtgggcgatgggcgagttgcggcaaaagcgattgatctgttcctcaat
ggcgatatggcggatatgccgaaacctgcgttcaactctcgtaaagagaaaaaactagcg
caggtagaccctcttcatttcgaaaatatccaaaaagttgctcgttcaatcatgccggag
ttgactccagcgcagcgtgagcagagttttgctgaagtggagctgggctttgataacgat
gaagccatgaaagaagcggcgcgctgcttagagtgtggttgccaggcgaataccgactgt
gccttgcgagattactccacggaatatcatgccgaacaacatttcgatgtttccgtggac
gtttcctctgctagcgtgattggtcatcaagattggctcgatttgcgagcgaaagatctt
cgtcacaaatacgaagtagaccgcagttctgagttcattgaatttgatgctaaccgctgc
atcagttgtggtcagtgtattcaagcatgccgtgagcaagcggtacatggtgtgttgagt
tttgtgtcggataaaaatggccgaccagctttacgaccagatgatcgtccacgattccgc
tccgatgaaaaaggcgcaagctgcagcggtttgacgctcatgggcgattcaaaatgcgtg
caatgtggggcgtgtgttcaggcatgtccaacgggcgcgatggtggacagccgtgaccgc
tctcaaggcagaaccgaacagctaaaagccgtcgataccatttgtacctactgcggtgtg
ggttgtaagttgaccatgtttgtcgatgagcgacaaaacaaaatccgctatgtaaaaggg
gcggattcgccagttaaccaaggtatgctgtgcgtgaaaggccgttttggttttgatttc
attagcagcgaagagcgtttaacgacaccactgattcgtaaagatggttggttgcagcca
gcaacttgggacgaagcgattcagctagtggcttcgaagctttcgaccatcaagcaagat
tttggtagcaacgcactggccggattctcttcagcgaaaaccactaacgaagataactac
gcgtttcaaaaattcatccgtcgtgaacttggtacgaacaacgttgatcactgcgcacgt
ttgtgtcacgcatcaagtgtgacagggcttgaagcatcgttggggagtggtgcgatgacc
aacgacattccaagcattaagcattccgatgtgatctttattatcggttctgacaccaca
tctgcgcacccgatcatcgcttcgcacatcaaacaggcgattcgtcatcacggggcgcgc
ttgattgtggcagacccgaaacgagtggacatggctgaacatgcagagctgtacttagcg
catcgaccgggtacggatgttatgttgctcaacggcgtgatgcagcaaatcatcaaaaat
ggttggtacgatcaagaatacatcgaagagcgcgtagacggctttgataccttgcttcaa
gaggtgatgtcgccagcgtacaacctcgacaaagttgagttagtgacgggcgtaaaagcg
gacgatattttcgcgatggcgcgaatgattggtacggcaaaacgcacggcggtgtattac
tcaatgggtattacccagcatacaacaggtcacgacaacgttcgttcgattgcaaacctg
caattgttgtgtggcaacatcggtattgagggtggtggtattaacccactgcgcggtcaa
tcaaacgtacaaggtgcgtgtgatatgggcgctttaccgaactgttatccgggatatcaa
aaagtgtataacccgattgttcgtcagaaattcgcgattgagtgggatgcgccgaactta
ccttctgagcaagggcttaccctaacggaaatcatcgatgcggcgtgcaaacgagaagtt
cgcgggatgtacatcatgggcgaaaacccagtactgagcgatccaaaccaagcacacgtg
attgaagggttggaagcactcgactttttggtcgtgcaagacatcttcctcaccgagacg
gcgcagtacgccgatgtggtattgccttcttgttcatttgcggaaaaatccggtcacttc
accaatactgagcgacgcgtgcagcgcgttaatgcggcagtgaaagcgccgggtgaggcg
aaagaagattggtggatcattcaagcgatcgcaaacgcgatgggcagcgattggcattac
cagtgcgtttctgaaatcactagcgagatcgcgcgtgtaacgccgcaatatgcagggttg
cgttgggacgcgatcacgccgaacggtgttcaatggccaagtaacaagaacaatccaaac
ggtactcgtattatgcaccaaacccaatttacccgagggaaagggcaaatggtgggcgtg
ccgttccgctatgcagctgagttgcctgatgaagagtatcctttggtgcttacaacaggg
cgtgtgctagaacagttccacaccggtacgatgacacgcaaaacgaaagggttggataac
cttgctgggccaagagcgatgatcagtgttgaagatgccgaagcaattggtatccataat
ggtcagcgcctaaaagtgtcgactcgtcgtggcagcatcgaaattgatgcgtttgtgacc
aagcgaatgcaaaaaggcgtcgtgtttattcctttccatttcgttgagtcgccagttaac
cgattgacgactacggcaacggacccgcatgcgaaaattcctgaattcaaagtcgcagcg
gtgaagattgaaatcagtgaaacggctgctcaaccagagcctgtcgaggaagcggtacac
tacgtctaa
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