Vibrio diabolicus: AL552_02995
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Entry
AL552_02995 CDS
T05332
Name
(GenBank) 3-methyladenine DNA glycosylase
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
vdb
Vibrio diabolicus
Pathway
vdb03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
vdb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AL552_02995
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vdb03000
]
AL552_02995
03400 DNA repair and recombination proteins [BR:
vdb03400
]
AL552_02995
Enzymes [BR:
vdb01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
AL552_02995
Transcription factors [BR:
vdb03000
]
Prokaryotic type
Helix-turn-helix
AraC family
AL552_02995
DNA repair and recombination proteins [BR:
vdb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
AL552_02995
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HTH_AraC
HhH-GPD
HTH_3
Motif
Other DBs
NCBI-ProteinID:
AVF92807
LinkDB
All DBs
Position
2:complement(613287..614654)
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AA seq
455 aa
AA seq
DB search
MFIHPHTSLTFEQCHKARVARDSRFDGRFYVAVKTTGIFCRPICPANLPKEENVEYFTDK
AQALQAGYRPCLRCRPDSAPGSWAWKGVETTFQRAILLIDRGELHHHSVSELAERVGISD
RYLRMLFEQYLGMSPKQYAQYQQLMFAKQLLHSSSMSVTEVGFASGFNSTRRFNDAFQKF
LKLTPSQVRRKEFDGMGSNRIALPYRGELNWQHMLNFYRLRAIEGVELVSDESYQRNVCL
DTSKAWFKATKGEGYLELAFEIEDVTKLQNLVSDIRRMFDLDADICTVEQHLDYVAPGLV
SSKGIRIPGVWNAWEAGVRAILGQQVSVKAAIGQLNLLVTTLSGESEKRFFPTPDAIANT
DVSFLRMPQSRKETLVRFAQFMQDNSETDPQQWLALKGIGPWTVSYAQLRGQSHPDCFLD
KDLVVKKAMQRYPSLNTHTAAPWGSYATFHLWNQS
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgtttattcacccccatacctcactgactttcgagcagtgtcataaggcgcgagtcgcg
cgagacagccgctttgatgggcgattttatgtggcagtgaaaacaacggggatcttttgt
cgcccaatttgtccggctaatttacctaaagaagaaaatgtagagtacttcaccgataaa
gcgcaagctctccaagcggggtaccgtccttgtttgcgttgtcgacctgatagcgcgccg
ggttcttgggcatggaaaggcgtagaaacgacctttcaacgagcgattttgttaattgat
cgaggggaactgcatcaccactcggtgtctgagctagcagagcgtgttgggatttcggat
cgctacttacgtatgttgtttgagcagtatctaggcatgtcacccaagcagtatgcgcaa
tatcaacaattaatgttcgccaaacagttgcttcattccagttctatgtcggtcaccgaa
gtggggtttgcgtctggttttaacagtacacgccgctttaacgatgctttccaaaagttt
ctcaaactgacgccttctcaagtccgtcgcaaagagtttgacggtatgggtagcaatcga
attgccttgccttatcgaggtgaattgaattggcagcacatgttgaacttttaccgttta
cgagcgattgagggggttgagctggtgagtgatgagagttaccagcgcaatgtttgtctg
gataccagtaaagcatggtttaaagcgaccaaaggtgaagggtatctagagctagcgttt
gaaattgaagatgtaacgaagctgcaaaacttggtgtctgatattcgtcgtatgttcgat
cttgacgccgatatttgtactgttgagcagcatttggattatgttgcaccagggcttgtg
tcgagtaaaggtattcggattcctggtgtatggaatgcatgggaggctggagttcgagcg
attttaggccaacaagtgtcggttaaagcggcgattggtcaacttaacttattggtgacc
acacttagtggagagtcagaaaaacgctttttcccgacaccagatgcgatagctaatacc
gacgtgagctttttgcgcatgccgcaaagccgtaaagagacgctagtgcgcttcgcccag
ttcatgcaggacaactcagaaaccgacccccagcagtggctagctttgaaaggcattgga
ccttggacagtcagttatgctcaactgcgagggcaatctcaccccgattgctttttagat
aaagacttagtggtgaaaaaggcgatgcagcgttacccatcactgaatacgcacactgcg
gccccttggggaagctacgcaacgtttcacttatggaatcaatcatga
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