Vibrio diabolicus: AL552_03910
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Entry
AL552_03910 CDS
T05332
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
vdb
Vibrio diabolicus
Brite
KEGG Orthology (KO) [BR:
vdb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vdb03400
]
AL552_03910
Enzymes [BR:
vdb01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
AL552_03910
DNA repair and recombination proteins [BR:
vdb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
AL552_03910
Prokaryotic type
AL552_03910
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
AVF92981
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Position
2:complement(828299..829780)
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AA seq
493 aa
AA seq
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MQTINVVWLKRDLRLTDHQPLTQALSSKHPTVLLYIVEPLLLNNPHYSERHWRFVWQSLQ
DMNETLKAYGHRITALFGDALACFQSIQMQYQINAVFSHQEIGLNCTFERDKQIADWLHE
QNITWFEFEHGAVIRGAKDRQGWDKHWDLVMRASISPLELQTNLLHSLDAEALGCAFSPP
SSWLSKCKGMQTGGSQLAWKTLEDFFNRRGRDYYRSISSPTASRTACTRLSPYLAWGNIS
LREVYQYLLKHWQVAGFRRSLIALSSRLHWHCHFIQKFESEYDMEFYCVNRAYESLIKQS
STFDEEKLAAWKSGHTGIPLIDACMRCLHQTGYINFRMRAMLVSFLTHHMNMDWRTGVTH
LAQLFLDFEPGIHYPQFQMQAGVTGTNTIRIYNPVKQAQEHDPDGAFIYKWVPELQMVPT
PLLFEPWTMTQMETVMYHLKPDSRYLAPIVDLNSAAKDARERLWAWRKRADVKQEGKRIL
TRHVRPSKESRAR
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgcaaacaatcaatgtcgtgtggttaaaacgagatttaagactgactgaccaccagccc
ttaacacaagcattgtcgtcaaagcacccaacggtacttttatatattgttgaaccgttg
ctgttaaacaaccctcactattctgagcgtcactggcgatttgtttggcaatcattgcaa
gacatgaatgagacgctcaaagcctatggacaccgcatcacggctctgtttggcgatgcc
ttagcatgttttcaatcaattcaaatgcaatatcaaatcaacgctgtgttttctcatcag
gaaatagggctcaactgcacctttgagcgcgataagcaaattgccgactggctgcatgag
cagaacatcacgtggtttgagttcgagcacggtgctgttattagaggagcaaaagaccgg
cagggttgggacaaacattgggatttggtcatgagagcctccataagccctcttgagctg
caaaccaacttgttgcattcattggatgcagaagcactcggctgcgcgttttcgccacct
tcatcctggctatcaaaatgcaaaggaatgcaaacgggaggaagccaactcgcttggaaa
acactggaggactttttcaatcgtcgaggtcgtgattactatcgaagcatttctagtccc
acagcctcacgtacagcctgtactcgcctttctccatacctcgcttggggtaatatatcc
ttgcgtgaagtttatcagtacctattgaaacactggcaagttgctgggtttcgtcgcagc
ttaattgcgttgtcttcacggctgcattggcactgccatttcatacagaaattcgagtcg
gaatacgacatggagttttactgtgttaaccgggcttacgaatcgttgattaaacaaagt
agcactttcgatgaagaaaagttagcagcatggaaatccgggcatactggcatacctttg
atcgatgcctgtatgcgctgtttgcatcagactggctatataaactttcgcatgcgtgcc
atgctggttagttttctcactcatcacatgaacatggattggcgaactggcgtgacgcat
ttagcgcaactattcctcgactttgagcctggtattcattacccacaattccaaatgcaa
gccggggtaactgggaccaatacaatccggatttacaacccggttaagcaagcccaagaa
catgaccctgatggcgcgttcatctataaatgggtgcctgaattgcaaatggtccccacc
ccactattgttcgagccctggacaatgacacagatggaaaccgtcatgtaccacttgaaa
ccggatagccgttacctagcgcctattgtcgacctaaatagcgcagctaaagacgcaagg
gagcgtctatgggcatggcgcaaacgggccgatgtaaaacaagaaggcaaacggatttta
acgcgacacgtgaggccatcgaaagaaagcagggctcgttga
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