Vibrio diabolicus: AL552_03935
Help
Entry
AL552_03935 CDS
T05332
Name
(GenBank) D-alanyl-D-alanine carboxypeptidase
KO
K07258
serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:
3.4.16.4
]
Organism
vdb
Vibrio diabolicus
Pathway
vdb00550
Peptidoglycan biosynthesis
vdb01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
vdb00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
AL552_03935
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
vdb01002
]
AL552_03935
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
vdb01011
]
AL552_03935
Enzymes [BR:
vdb01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
AL552_03935
Peptidases and inhibitors [BR:
vdb01002
]
Serine peptidases
Family S11: D-Ala-D-Ala carboxypeptidase A family
AL552_03935
Peptidoglycan biosynthesis and degradation proteins [BR:
vdb01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
AL552_03935
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S11
PBP5_C
Beta-lactamase2
Beta-lactamase
Peptidase_S13
Motif
Other DBs
NCBI-ProteinID:
AVF92986
LinkDB
All DBs
Position
2:833625..834782
Genome browser
AA seq
385 aa
AA seq
DB search
MKVSLARWTIVTCLISVPTFAVVTPNPPQLQAKGYVLMDFQSGAIIAEHNGRAGLAPASL
TKLMTAYVVGQEIKAGRLNWDDVVTVSENAWSAKFPGSSKMFIKPKDEISVANLMRGVII
QSGNDACVALAEHVAGSERGFVALMNGWAEKLGLQDTYFVNSHGLDSDGIQTSPTDMAKL
MQSIISDVPDVYALYSEKVFKWNDITQYNRNKLLWDNSIDVDGGKTGYTSNAGYSLVSSA
KEGRMRLISVVMGTPSKQARISQSKNLLSYGFRFYDTKQVAKQGEVESKVRVWKGNANQV
EAIFAKDAYLTLPRSMTAGLDKSVVLNEPLIAPIAQGDEIGKVVWKSDDSTVASYPLVSS
QAVEEGSWFGQLWDSLVLWVKSFFN
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtgtcactggctcgatggacaattgtgacttgtttaataagcgtacctactttt
gccgttgttacgcctaacccacctcagttacaggcaaaaggctacgtattaatggacttt
caatccggtgccattattgccgagcataacgggcgagcaggccttgctccggcgagttta
accaagttgatgaccgcttatgtagttggacaagaaatcaaagcggggcgtttgaattgg
gatgatgttgtcaccgtgagcgaaaacgcgtggtcggccaagtttcccggttcttctaaa
atgttcatcaaaccgaaagatgaaattagtgttgcgaacttaatgcgcggcgtgatcatc
caatcaggaaatgacgcgtgcgttgcactggctgagcacgttgcaggtagtgaacgcggc
tttgtcgccttgatgaatggttgggcggagaaattaggacttcaagacacctattttgtg
aactctcatggtcttgatagtgatggcatccaaacctcaccaaccgatatggcaaaactc
atgcagtcgatcatcagcgatgttcctgatgtgtatgcgctatacagcgagaaagtcttc
aagtggaacgacattacgcagtacaaccgcaataagttgttgtgggacaattccattgat
gtcgacgggggcaaaaccggctacaccagcaatgccggatacagcttggtgagctcggcc
aaagaaggaagaatgcgccttatttcggtggtgatgggcacgccaagtaaacaggctcgg
atcagccaatcgaagaatctactcagctatggttttcgcttttatgacaccaagcaagtt
gctaaacagggagaagttgagtctaaagttcgcgtttggaaggggaatgctaatcaagtt
gaagcgatcttcgctaaagatgcctatctcactctacctcgttcaatgacggctgggctt
gataagagtgtggtgttaaatgaaccgttgattgcgccgatcgcgcaaggagatgagatt
ggtaaggtcgtttggaaaagcgatgacagtaccgtggcgagttatcccttggtcagcagc
caagcggtagaagagggctcgtggttcggtcagctttgggacagtctggtgctgtgggtg
aaatcgttctttaactag
DBGET
integrated database retrieval system
