Vibrio diabolicus: AL552_04505
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Entry
AL552_04505 CDS
T05332
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
vdb
Vibrio diabolicus
Brite
KEGG Orthology (KO) [BR:
vdb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vdb03400
]
AL552_04505
Enzymes [BR:
vdb01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
AL552_04505
DNA repair and recombination proteins [BR:
vdb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
AL552_04505
Prokaryotic type
AL552_04505
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
AVF93090
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All DBs
Position
2:947676..949091
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AA seq
471 aa
AA seq
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MILVWFRRDLRTLDHTALKAALDSGQPIVACFIATPEQWREHHMAPMQADLIARRLEYLN
DELESLNVPFLYKEVPSFSDCTEVISEWAKTLEATSVMANIHYEVNERELDAQVSEALAS
HDIDFELFHDKCVHPPTTVLNKQGEYFKVFTPFKRAWLTQFQMPAVTKPQEQAPLSSKLL
EQLEPIRFSSDFTFSYPRESSEDWFASTNDVLKQLREFARERSDAYKEDRDFPAIDGTSQ
LSPYLAIGALSPRQCIARLYAENQQNDLTEGKATWLSEIIWREFYQHLLVFEPKLVKGKG
FIDWEDKIQWSYDEQAFERWKAGATGYPIVDAAMRQLNQTGWMHNRLRMVVASFLTKDLH
IDWRWGEAYFMSKLVDGDFAANNGGWQWSASTGCDGQPYFRIFNPISQGEKFDSDGQFVR
HWVPEIKSVPNKYIHKPWTWEGFSLLEYHKPMVDHKTEREITLRLFKSAKE
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgatcttagtatggtttcgacgtgatttacgaacgttagaccacaccgcacttaaagcg
gcgttagattcaggtcagcctattgtcgcttgttttatcgcgacgccagagcagtggcga
gaacaccacatggcgccgatgcaggcggatctcattgctcgtcgtttagagtatctcaac
gacgagttggaaagcctgaatgttccttttttatataaagaggtgccgtcgttttctgat
tgtaccgaagtgattagtgaatgggcgaaaacacttgaagcaacgtctgttatggcgaat
attcactatgaagtgaatgaacgagagctcgatgcacaagtgagtgaggcgctagcttcc
catgatatcgactttgaactgttccacgacaaatgtgtgcacccaccaacgacggttctc
aataagcaaggtgagtattttaaggtatttacaccattcaaacgtgcttggttgacgcag
tttcaaatgccagcggtaacaaagcctcaagaacaagcgccgctaagcagcaaactattg
gaacaattagagccgattcgatttagttcagacttcacgtttagctatcctcgagagtcc
agcgaggattggtttgcttcgaccaatgatgttttaaagcagcttagggaatttgctcgt
gagcgcagtgatgcttacaaggaagatcgagattttccggctattgatggcaccagtcaa
ctgtctccctatcttgcgattggtgcgttgtcaccaaggcaatgtattgctcgcttgtat
gctgaaaaccaacaaaatgacctaacagaaggaaaagcaacttggttgagtgagatcatt
tggcgtgagttttatcagcatctgttggttttcgaaccaaagctcgttaaaggcaaaggc
tttatcgactgggaggataaaattcagtggtcttatgatgagcaggcttttgagcgatgg
aaggctggagcgacagggtacccgatcgtcgatgcagcaatgcgtcagctcaaccaaaca
ggctggatgcataacaggcttcgtatggttgtcgcgagctttctcaccaaggatttacac
attgactggcgttggggcgaagcgtacttcatgagtaagctggtggacggcgatttcgca
gcaaacaatggtggttggcagtggtctgcatcgacgggttgtgatgggcagccgtacttc
cgtattttcaacccgataagccaaggtgagaagtttgattctgatggccaattcgtgcgc
cactgggtgcctgaaatcaaaagtgtgccaaacaaatacatccataaaccttggacttgg
gagggattttctttactggaatatcacaagccgatggttgatcacaagacagaaagagag
ataaccttacggctctttaaaagtgccaaggaataa
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