KEGG   Vibrio diabolicus: AL552_04510
Entry
AL552_04510       CDS       T05332                                 
Name
(GenBank) peptidase
  KO
K19236  L,D-transpeptidase YcfS
Organism
vdb  Vibrio diabolicus
Pathway
vdb01503  Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:vdb00001]
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01503 Cationic antimicrobial peptide (CAMP) resistance
    AL552_04510
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:vdb01002]
    AL552_04510
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:vdb01011]
    AL552_04510
Peptidases and inhibitors [BR:vdb01002]
 Cysteine peptidases
  Family C82
   AL552_04510
Peptidoglycan biosynthesis and degradation proteins [BR:vdb01011]
 Peptidoglycan biosynthesis and degradation
  Transpeptidase
   AL552_04510
SSDB
Motif
Pfam: YkuD Ldt_C LysM
Other DBs
NCBI-ProteinID: AVF93091
LinkDB
Position
2:949098..950024
AA seq 308 aa
MLSKKRSMSFAKRTLLSVSLSLASGLSFAKMYELPEDGSRLIGRLENHVVQEGETMANIA
KHYDVGMLGLMAANKGVDPFLPEEGHVLTIPTQLILPDVPHKGIVINLAELRLYYFPKGE
DIVHVFPVGIGRIGRDTPVMTTRISQKRPNPTWTPPASIRAEYKAKGIDLPTVVPAGPDN
PLGMFALRLAYGNGEYLIHGTNKDFGIGMRVSAGCIRMDPNDIEWLFEKVRNGEEVNIIN
QPVKVSLEPDRSVFLEAHEPLTRSNGEKDHLQVPKELKWWLDEFGLKNVKAKAAIAAQNG
VPVEITAP
NT seq 927 nt   +upstreamnt  +downstreamnt
atgcttagcaaaaagcgatcaatgagtttcgcaaaacgtacgctattatctgtatcgtta
tctttagcgagtggtttgtcattcgctaaaatgtacgagctaccagaggatggcagtcgt
ttaattggtcgccttgaaaaccacgtcgtgcaagaaggtgaaactatggcaaatattgcc
aagcactacgatgtcgggatgctaggtttaatggcggcaaataaaggcgtggatcccttc
ttgccagaagagggacacgttcttactattccaacacaactgatcctcccagatgtaccc
cacaaaggcattgtcatcaatttagcggaattgcgcttatactatttcccgaaaggggaa
gatattgtgcatgtattccccgtgggaatcgggcgaattgggcgagacaccccggtgatg
acaacgcgtattagccaaaagcgtccaaaccctacgtggacgccgccagcctcgattcgt
gccgagtacaaagcgaagggcattgacttgccaaccgttgtacctgccggtccagacaac
ccacttgggatgtttgcattgcgtttagcctacggaaatggcgagtaccttattcacggt
accaacaaagactttggcatcggtatgcgagtcagcgcgggttgcattcgtatggacccg
aacgacattgagtggttgtttgaaaaagttcgtaacggtgaagaagtgaatatcattaac
caaccagtgaaagtatcactagagccagacagaagtgtatttttagaggcacatgagcca
ttgactcgcagtaatggtgagaaagatcacctacaggtaccaaaagagttaaagtggtgg
ctggatgagttcggactgaaaaatgtgaaggctaaagcagcgattgccgcacagaatgga
gttcctgtcgaaataaccgcgccttaa

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