Vibrio diabolicus: AL552_04510
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Entry
AL552_04510 CDS
T05332
Name
(GenBank) peptidase
KO
K19236
L,D-transpeptidase YcfS
Organism
vdb
Vibrio diabolicus
Pathway
vdb01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
vdb00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01503 Cationic antimicrobial peptide (CAMP) resistance
AL552_04510
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
vdb01002
]
AL552_04510
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
vdb01011
]
AL552_04510
Peptidases and inhibitors [BR:
vdb01002
]
Cysteine peptidases
Family C82
AL552_04510
Peptidoglycan biosynthesis and degradation proteins [BR:
vdb01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
AL552_04510
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
Ldt_C
LysM
Motif
Other DBs
NCBI-ProteinID:
AVF93091
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All DBs
Position
2:949098..950024
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AA seq
308 aa
AA seq
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MLSKKRSMSFAKRTLLSVSLSLASGLSFAKMYELPEDGSRLIGRLENHVVQEGETMANIA
KHYDVGMLGLMAANKGVDPFLPEEGHVLTIPTQLILPDVPHKGIVINLAELRLYYFPKGE
DIVHVFPVGIGRIGRDTPVMTTRISQKRPNPTWTPPASIRAEYKAKGIDLPTVVPAGPDN
PLGMFALRLAYGNGEYLIHGTNKDFGIGMRVSAGCIRMDPNDIEWLFEKVRNGEEVNIIN
QPVKVSLEPDRSVFLEAHEPLTRSNGEKDHLQVPKELKWWLDEFGLKNVKAKAAIAAQNG
VPVEITAP
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atgcttagcaaaaagcgatcaatgagtttcgcaaaacgtacgctattatctgtatcgtta
tctttagcgagtggtttgtcattcgctaaaatgtacgagctaccagaggatggcagtcgt
ttaattggtcgccttgaaaaccacgtcgtgcaagaaggtgaaactatggcaaatattgcc
aagcactacgatgtcgggatgctaggtttaatggcggcaaataaaggcgtggatcccttc
ttgccagaagagggacacgttcttactattccaacacaactgatcctcccagatgtaccc
cacaaaggcattgtcatcaatttagcggaattgcgcttatactatttcccgaaaggggaa
gatattgtgcatgtattccccgtgggaatcgggcgaattgggcgagacaccccggtgatg
acaacgcgtattagccaaaagcgtccaaaccctacgtggacgccgccagcctcgattcgt
gccgagtacaaagcgaagggcattgacttgccaaccgttgtacctgccggtccagacaac
ccacttgggatgtttgcattgcgtttagcctacggaaatggcgagtaccttattcacggt
accaacaaagactttggcatcggtatgcgagtcagcgcgggttgcattcgtatggacccg
aacgacattgagtggttgtttgaaaaagttcgtaacggtgaagaagtgaatatcattaac
caaccagtgaaagtatcactagagccagacagaagtgtatttttagaggcacatgagcca
ttgactcgcagtaatggtgagaaagatcacctacaggtaccaaaagagttaaagtggtgg
ctggatgagttcggactgaaaaatgtgaaggctaaagcagcgattgccgcacagaatgga
gttcctgtcgaaataaccgcgccttaa
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