Vibrio diabolicus: AL552_06715
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Entry
AL552_06715 CDS
T05332
Symbol
gcvP
Name
(GenBank) glycine dehydrogenase (aminomethyl-transferring)
KO
K00281
glycine cleavage system P protein (glycine dehydrogenase) [EC:
1.4.4.2
]
Organism
vdb
Vibrio diabolicus
Pathway
vdb00260
Glycine, serine and threonine metabolism
vdb00630
Glyoxylate and dicarboxylate metabolism
vdb00670
One carbon pool by folate
vdb00785
Lipoic acid metabolism
vdb01100
Metabolic pathways
vdb01110
Biosynthesis of secondary metabolites
vdb01200
Carbon metabolism
Module
vdb_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
vdb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
AL552_06715 (gcvP)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
AL552_06715 (gcvP)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
AL552_06715 (gcvP)
00670 One carbon pool by folate
AL552_06715 (gcvP)
Enzymes [BR:
vdb01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.4 With a disulfide as acceptor
1.4.4.2 glycine dehydrogenase (aminomethyl-transferring)
AL552_06715 (gcvP)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
GDC-P
GcvP2_C
Beta_elim_lyase
Aminotran_5
RNase_H2-Ydr279
TFC3_eWH
Motif
Other DBs
NCBI-ProteinID:
AVF93460
LinkDB
All DBs
Position
2:complement(1450432..1453296)
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AA seq
954 aa
AA seq
DB search
MTELLQSLSTQNEFVGRHNGPKLSDQQKMLDAINAVSLDALIEETVPAQIRLEQPMTLAE
AKSEADMLVTMKQFAKQNQIKRTFIGQGYYNTFTPNVILRNVLENPGWYTAYTPYQPEIS
QGRLETLLNFQQMIIDLTGMEIANASLLDEATAAAEAMTLCKRAGKSKSNVFFVADDVHP
QTLEVVKTRAKFIGFEVLVGSLESLQEQDVFGALVQYPSTTGEVRDLTDIIAKAQANKTL
VTVATDLLASTLLKPAGEMGADVAIGSAQRFGVPMGYGGPHAAFMATRDKHKRTMPGRVI
GVSIDTNGNQALRMAMQTREQHIRREKATSNICTAQALLANMASFYAVYHGAEGLRTIAR
RTHHMTAIIAAGLTKGGFELAHNSFFDTITINTGSKTEELYAKALSADINLRLLPGKLGI
SCDETTTVADVEALFAVFGVKEDVAALSTEIAGNEFAAIPEALRRTTEYLTHPVFNTHHS
ETQMMRYLKQLENKDFSLTHGMIPLGSCTMKLNAAAEMIPITWPEFGSIHPFAPAEQAAG
YAALAKDLKEKLCEITGYDAFSLQPNSGASGEYAGLIAIQRYHESRGEGHRNVCLIPSSA
HGTNPATASMVSMKVVVVKCDEEGNIDIDDLAAKIEKHKDNLSSIMITYPSTHGVYEEKV
KEVCEMVHAAGGQVYLDGANMNAQVGLTSPGFIGSDVSHLNLHKTFCIPHGGGGPGMGPI
GVKSHLAPFLPGHIEDGVEGEDFAVSAADMGSASILPISWAYIAMMGEAGLTDATKVAIL
NANYVMETLRQHYPVLYRGKNGRVAHECIIDIRPLKEETGISEEDIAKRLMDYGFHAPTM
SFPVAGTLMVEPTESEDLEELDRFCDAMIAIREEMEKVKNGEWPLDNNPLVNAPHTQVDL
SAEEWDRPYSRELGCFPSKATKSWKYWPTVNRVDNVYGDRNLICSCPSIDNYED
NT seq
2865 nt
NT seq
+upstream
nt +downstream
nt
atgactgaattacttcaaagcctcagcacacaaaatgagttcgttggacgccacaacgga
ccaaaactttcagaccaacaaaaaatgttggatgccatcaacgcggtaagccttgacgcc
ctcatcgaagaaaccgtgcctgcacaaattcgcctagaacaaccaatgacgttggcagaa
gcgaaaagcgaagcagacatgctagtgacgatgaagcagtttgctaaacaaaaccaaatt
aaacgtacattcattggccagggctactacaacacgtttactccaaacgtcattctacgt
aacgtgctagaaaaccctggctggtataccgcttacacaccttaccaacctgaaatttct
caaggtcgcttggaaacccttttaaacttccaacaaatgatcatcgacctaactggtatg
gaaatcgcgaacgcctcattgctagacgaagcaacagcggcagcagaagcaatgactctg
tgtaagcgcgcaggtaagagcaagagcaacgtattctttgtggctgacgatgttcaccca
caaacgctagaagtagtaaaaactcgtgcaaaattcatcggctttgaagttctggttggt
tcgctagaatccctacaagagcaagacgtgttcggcgcattagttcaatacccaagcaca
acaggtgaagttcgtgacctaacggacatcatcgcaaaagcgcaagcaaacaaaacgctt
gtcactgttgcgactgacctgcttgcttctaccctattgaaacctgctggtgaaatgggc
gcagacgtagcaatcggttctgcacaacgttttggcgttcctatgggttacggcggtcca
cacgcggcattcatggcaacgcgtgacaaacacaagcgtaccatgccaggtcgtgttatc
ggtgtttctatcgataccaacggtaaccaagcactgcgcatggcaatgcaaactcgtgag
cagcatatccgccgcgaaaaagcgacatcgaacatctgtaccgctcaagcattgctagcg
aacatggcgtctttctacgcggtttaccacggcgcagaaggtctacgcactattgctcgc
cgtacacaccatatgactgcgattatcgccgctggcctaaccaaaggcggctttgaactt
gctcataacagcttcttcgataccatcaccatcaacacaggttcaaaaacagaagagctt
tacgcaaaagcactttcagcagacatcaacctacgtctactacctggcaagttaggtatt
agctgtgacgaaacaaccacggtcgctgatgtagaagcactatttgcagtctttggtgta
aaagaagacgtagcagcactatcgacggaaatcgcaggcaacgagtttgcggcaattcca
gaagcgctacgccgcacaacagaatacctgactcaccctgtattcaatacgcaccatagc
gaaacgcaaatgatgcgttacctgaaacagctagagaacaaagacttctcgctaacgcat
ggcatgatcccactaggcagctgtacgatgaagctgaacgcagcagcagagatgatccca
atcacttggcctgagtttggttctatccacccattcgcgcctgcagaacaagcggcgggc
tatgcagcactagcgaaagatctaaaagagaagctttgtgagatcacaggctacgacgca
ttctcacttcagccaaactctggtgcatcgggtgagtatgcaggtcttatcgcgattcaa
cgctaccacgaaagccgtggcgaaggtcaccgcaacgtatgtttgatcccgagctctgct
cacggtacaaaccctgcaacggcgtctatggtgtcaatgaaagttgtggttgttaagtgt
gatgaagaaggcaacatcgacatcgatgacctagcagcgaaaatcgagaagcacaaagac
aacctatcaagcattatgatcacttacccttctacgcacggcgtttacgaagagaaagtg
aaagaagtgtgtgaaatggttcatgccgccggcggtcaggtttacctagacggcgctaat
atgaacgcgcaggttggtctaacatcaccaggcttcatcggttcagacgtttctcaccta
aacctacacaaaaccttctgtatcccacatggtggtggcggtccgggtatgggtcctatc
ggtgtgaaatctcacctagcgcctttcctaccaggccatattgaagacggcgtagaaggc
gaagattttgcagtatcagcagcagatatgggtagcgcttctatcctacctatctcttgg
gcttacatcgcaatgatgggcgaagcaggcctaacagatgcaacaaaagtagcaattctg
aacgcaaactacgtgatggaaacacttcgccaacactaccctgttctttaccgtggcaaa
aatggtcgtgtagcgcacgaatgtattatcgacattcgtccactgaaagaagaaacaggc
atcagcgaagaagacattgcgaagcgtctaatggactacggtttccacgcaccaactatg
tcgttccctgtggcgggcacgctaatggttgagccaacggaatcggaagatctagaagag
ctagaccgcttctgtgatgcgatgatcgctatccgcgaagaaatggaaaaagtgaaaaac
ggtgaatggccactagataacaacccacttgttaacgcgccacacacacaagttgatctt
tctgctgaagagtgggaccgtccttactctcgagagcttggctgctttccttctaaagca
accaaatcttggaagtactggccaacggtaaaccgcgtagataacgtatacggcgaccgt
aacctaatctgctcgtgcccaagcatcgataactacgaagattaa
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