Vibrio diabolicus: AL552_06725
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Entry
AL552_06725 CDS
T05332
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
vdb
Vibrio diabolicus
Pathway
vdb00260
Glycine, serine and threonine metabolism
vdb00460
Cyanoamino acid metabolism
vdb00630
Glyoxylate and dicarboxylate metabolism
vdb00670
One carbon pool by folate
vdb00680
Methane metabolism
vdb01100
Metabolic pathways
vdb01110
Biosynthesis of secondary metabolites
vdb01120
Microbial metabolism in diverse environments
vdb01200
Carbon metabolism
vdb01230
Biosynthesis of amino acids
vdb01240
Biosynthesis of cofactors
vdb04981
Folate transport and metabolism
Module
vdb_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
vdb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
AL552_06725 (glyA)
09102 Energy metabolism
00680 Methane metabolism
AL552_06725 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
AL552_06725 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
AL552_06725 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
AL552_06725 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
AL552_06725 (glyA)
Enzymes [BR:
vdb01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
AL552_06725 (glyA)
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GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
DegT_DnrJ_EryC1
Cys_Met_Meta_PP
Motif
Other DBs
NCBI-ProteinID:
AVF93462
UniProt:
A0AAP3CWG6
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All DBs
Position
2:complement(1453857..1455152)
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AA seq
431 aa
AA seq
DB search
MNKSYPNHSLENFFSTNLSATDDAVFAGIQAESARQNEQIELIASENIVSKAVMQAQGTC
LTNKYAEGYPGRRYYGGCEHVDTVEAIAIERAKKLFNCEYANVQPHSGAQANGAVKLALL
QPGDTILGMSLDAGGHLTHGARPALSGKWFNAVQYGVDRETLEINYDDVRALAVEHKPKM
IIAGGSAIPRVIDFAKFREIADEVGAILMVDMAHIAGLIATGAHPSPLPHAHVVTTTTHK
TLRGPRGGMILTNHEDIIKKINSAVFPGLQGGPLMHVIAAKAVAFGEALGPEFKTYIDSV
INNAKVLAEVLQTRGCDIVTGGTDTHLMLVDLRPKGLKGNKAEEALERAGITCNKNGIPF
DTEKPMITSGIRLGTPAGTSRGFGAEEFKLIGNWIGDVLDGLVNNPEGDADVEKRVRKEV
KELCSRFPLYQ
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atgaataagagttaccctaaccacagcttggaaaactttttctctaccaacctctctgcg
acagatgatgctgtctttgctggaattcaggcggaatccgctcgccaaaatgaacaaatc
gaacttatcgcttctgagaacattgtttctaaagcggtaatgcaagctcaaggcacatgc
ctaaccaacaaatacgctgaaggttatccaggtcgtcgttactacggtggttgtgagcac
gtagatacagtggaagccattgctatcgaacgcgcgaaaaaactttttaattgcgaatac
gcaaacgttcaacctcactcaggcgctcaagcaaatggtgcggtgaaactggctcttctt
caaccaggtgacaccattcttggcatgtctttggacgctggtggccacctaacacacggt
gcacgcccagcactttctggtaaatggtttaacgcagttcaatacggcgttgatcgcgaa
acactggaaatcaactacgacgacgttcgtgcacttgcagtagagcacaaaccaaagatg
atcatcgcgggtggcagtgctattccacgcgttatcgattttgctaagttccgtgaaatc
gctgacgaagttggcgcaattcttatggtcgatatggcgcacattgctggccttatcgca
acaggtgcacaccctagcccattgccacatgcacatgttgtgaccaccacaacacacaaa
acattgcgtggccctcgcggcggtatgattctgactaaccacgaagacatcattaagaaa
atcaactccgccgtattccctggcctacaaggcggcccactgatgcacgttatcgcagca
aaagcggttgcatttggagaagcacttggccctgaatttaaaacttatattgattcggtg
atcaataacgcaaaagtcctagcggaagtattgcaaactcgcggttgcgacatcgtaact
ggtggcacagacacgcacctaatgctggttgaccttcgccctaaaggcttgaaaggcaac
aaagcagaagaagctctagaacgtgctgggatcacatgtaataaaaatggcatcccattc
gatacagagaagcctatgattacatcgggcatccgtttaggaacgcctgcgggtacaagc
cgcggctttggcgctgaagaattcaaactcatcggtaattggataggtgacgtgctggat
ggtttggtgaacaacccagaaggtgacgcagacgttgaaaaacgcgttcgcaaagaagta
aaagaactttgcagtcgcttccctctttaccaataa
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